RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 MED11Q9P086 117 aa-2.61□□□□□ -2.83
SNORA40.15-201ENST00000516884 METTL1Q9UBP6 276 aaKnown RBP-2.61□□□□□ -2.83
SNORA40.15-201ENST00000516884 WDR7Q9Y4E6 1490 aa-2.61□□□□□ -2.83
SNORA40.15-201ENST00000516884 SPCS2Q15005 226 aa-2.62□□□□□ -2.83
SNORA40.15-201ENST00000516884 IBTKQ9P2D0 1353 aaPredicted RBP-2.62□□□□□ -2.83
SNORA40.15-201ENST00000516884 AKAP9Q99996 3911 aa-2.63□□□□□ -2.83
SNORA40.15-201ENST00000516884 TRAV12-3A0A0B4J271 114 aa-2.63□□□□□ -2.83
SNORA40.15-201ENST00000516884 IFNA1P01562 189 aa-2.63□□□□□ -2.83
SNORA40.15-201ENST00000516884 SLC25A5P05141 298 aaKnown RBP-2.63□□□□□ -2.83
SNORA40.15-201ENST00000516884 OR13C6PQ8NH95 151 aa-2.63□□□□□ -2.83
SNORA40.15-201ENST00000516884 DYNLRB2Q8TF09 96 aa-2.63□□□□□ -2.83
SNORA40.15-201ENST00000516884 LAMTOR2Q9Y2Q5 125 aa-2.63□□□□□ -2.83
SNORA40.15-201ENST00000516884 IFT172Q9UG01 1749 aa-2.63□□□□□ -2.83
SNORA40.15-201ENST00000516884 LAMA1P25391 3075 aa-2.63□□□□□ -2.83
SNORA40.15-201ENST00000516884 RPL22P35268 128 aaKnown RBP-2.64□□□□□ -2.83
SNORA40.15-201ENST00000516884 PIGYQ3MUY2 71 aa-2.64□□□□□ -2.83
SNORA40.15-201ENST00000516884 PPP1R14BQ96C90 147 aa-2.64□□□□□ -2.83
SNORA40.15-201ENST00000516884 DNAH9Q9NYC9 4486 aa-2.64□□□□□ -2.83
SNORA40.15-201ENST00000516884 PAPPAQ13219 1627 aa-2.64□□□□□ -2.83
SNORA40.15-201ENST00000516884 CUBNO60494 3623 aa-2.64□□□□□ -2.83
SNORA40.15-201ENST00000516884 FER1L6Q2WGJ9 1857 aa-2.65□□□□□ -2.83
SNORA40.15-201ENST00000516884 CLPSL1A2RUU4 121 aa-2.65□□□□□ -2.83
SNORA40.15-201ENST00000516884 NIPSNAP2O75323 286 aa-2.65□□□□□ -2.83
SNORA40.15-201ENST00000516884 CFAP126Q5VTH2 177 aa-2.65□□□□□ -2.83
SNORA40.15-201ENST00000516884 STX19Q8N4C7 294 aa-2.65□□□□□ -2.83
SNORA40.15-201ENST00000516884 PARP14Q460N5 1801 aa-2.65□□□□□ -2.83
SNORA40.15-201ENST00000516884 ARFGEF1Q9Y6D6 1849 aa-2.65□□□□□ -2.83
SNORA40.15-201ENST00000516884 ERCC6L2Q5T890 1561 aa-2.66□□□□□ -2.83
SNORA40.15-201ENST00000516884 M0QZK8 103 aa-2.66□□□□□ -2.84
SNORA40.15-201ENST00000516884 S100A3P33764 101 aa-2.66□□□□□ -2.84
SNORA40.15-201ENST00000516884 UFC1Q9Y3C8 167 aa-2.66□□□□□ -2.84
SNORA40.15-201ENST00000516884 UHRF1BP1LA0JNW5 1464 aa-2.66□□□□□ -2.84
SNORA40.15-201ENST00000516884 CCDC179H3BU77 68 aa-2.67□□□□□ -2.84
SNORA40.15-201ENST00000516884 J3KT08 172 aa-2.67□□□□□ -2.84
SNORA40.15-201ENST00000516884 GNG3P63215 75 aa-2.67□□□□□ -2.84
SNORA40.15-201ENST00000516884 TMED2Q15363 201 aa-2.67□□□□□ -2.84
SNORA40.15-201ENST00000516884 LINC00472Q9H8W2 130 aa-2.67□□□□□ -2.84
SNORA40.15-201ENST00000516884 A2MP01023 1474 aa-2.67□□□□□ -2.84
SNORA40.15-201ENST00000516884 TNRC18O15417 2968 aaPredicted RBP-2.68□□□□□ -2.84
SNORA40.15-201ENST00000516884 HRCT1Q6UXD1 115 aa-2.68□□□□□ -2.84
SNORA40.15-201ENST00000516884 BAGE3Q86Y29 109 aa-2.68□□□□□ -2.84
SNORA40.15-201ENST00000516884 FAM24BQ8N5W8 94 aa-2.68□□□□□ -2.84
SNORA40.15-201ENST00000516884 GOLGA4Q13439 2230 aaKnown RBP-2.68□□□□□ -2.84
SNORA40.15-201ENST00000516884 DNAH2Q9P225 4427 aa-2.69□□□□□ -2.84
SNORA40.15-201ENST00000516884 MYH3P11055 1940 aa-2.69□□□□□ -2.84
SNORA40.15-201ENST00000516884 DEFB123Q8N688 67 aa-2.69□□□□□ -2.84
SNORA40.15-201ENST00000516884 ATP6V0E2Q8NHE4 81 aa-2.69□□□□□ -2.84
SNORA40.15-201ENST00000516884 DYDC1Q8WWB3 177 aa-2.69□□□□□ -2.84
SNORA40.15-201ENST00000516884 SLC35B3Q9H1N7 401 aa-2.69□□□□□ -2.84
SNORA40.15-201ENST00000516884 NPVFQ9HCQ7 196 aa-2.69□□□□□ -2.84
SNORA40.15-201ENST00000516884 MED31Q9Y3C7 131 aa-2.69□□□□□ -2.84
SNORA40.15-201ENST00000516884 HIST1H1BP16401 226 aaKnown RBP-2.7□□□□□ -2.84
SNORA40.15-201ENST00000516884 DEFB135Q30KP9 77 aa-2.7□□□□□ -2.84
SNORA40.15-201ENST00000516884 SMIM20Q8N5G0 67 aa-2.7□□□□□ -2.84
SNORA40.15-201ENST00000516884 YTHDC2Q9H6S0 1430 aaKnown RBP-2.7□□□□□ -2.84
SNORA40.15-201ENST00000516884 ZCCHC11Q5TAX3 1644 aaKnown RBP-2.71□□□□□ -2.84
SNORA40.15-201ENST00000516884 SNX29P2Q8IUI4 249 aa-2.71□□□□□ -2.84
SNORA40.15-201ENST00000516884 MED23Q9ULK4 1368 aa-2.72□□□□□ -2.84
SNORA40.15-201ENST00000516884 TCRAP04437 139 aa-2.72□□□□□ -2.84
SNORA40.15-201ENST00000516884 FXYD6Q9H0Q3 95 aa-2.72□□□□□ -2.84
SNORA40.15-201ENST00000516884 H0YJX3 145 aa-2.73□□□□□ -2.85
SNORA40.15-201ENST00000516884 CFAP53Q96M91 514 aa-2.73□□□□□ -2.85
SNORA40.15-201ENST00000516884 NOP16Q9Y3C1 178 aaKnown RBP-2.73□□□□□ -2.85
SNORA40.15-201ENST00000516884 DNAJC15Q9Y5T4 150 aa-2.73□□□□□ -2.85
SNORA40.15-201ENST00000516884 MT1AP04731 61 aa-2.74□□□□□ -2.85
SNORA40.15-201ENST00000516884 UBE2D1P51668 147 aa-2.74□□□□□ -2.85
SNORA40.15-201ENST00000516884 TMEM91Q6ZNR0 172 aa-2.74□□□□□ -2.85
SNORA40.15-201ENST00000516884 ATP11AUNQ6ZP68 121 aa-2.74□□□□□ -2.85
SNORA40.15-201ENST00000516884 DEFB105AQ8NG35 78 aa-2.74□□□□□ -2.85
SNORA40.15-201ENST00000516884 NBASA2RRP1 2371 aa-2.74□□□□□ -2.85
SNORA40.15-201ENST00000516884 HSD11B1P28845 292 aa-2.75□□□□□ -2.85
SNORA40.15-201ENST00000516884 TCTAP57738 103 aa-2.75□□□□□ -2.85
SNORA40.15-201ENST00000516884 REEP5Q00765 189 aa-2.75□□□□□ -2.85
SNORA40.15-201ENST00000516884 CEP19Q96LK0 163 aa-2.75□□□□□ -2.85
SNORA40.15-201ENST00000516884 AGPAT4-IT1Q9H0P7 198 aa-2.75□□□□□ -2.85
SNORA40.15-201ENST00000516884 POLR2HP52434 150 aaKnown RBP-2.76□□□□□ -2.85
SNORA40.15-201ENST00000516884 DCUN1D2Q6PH85 259 aa-2.76□□□□□ -2.85
SNORA40.15-201ENST00000516884 CCDC32Q9BV29 185 aa-2.76□□□□□ -2.85
SNORA40.15-201ENST00000516884 DSPP15924 2871 aaKnown RBP-2.76□□□□□ -2.85
SNORA40.15-201ENST00000516884 PRRC2CQ9Y520 2896 aaKnown RBP-2.76□□□□□ -2.85
SNORA40.15-201ENST00000516884 MUC22E2RYF6 1773 aaPredicted RBP-2.77□□□□□ -2.85
SNORA40.15-201ENST00000516884 USP9XQ93008 2570 aaPredicted RBP-2.77□□□□□ -2.85
SNORA40.15-201ENST00000516884 FAM92AA1XBS5 289 aa-2.77□□□□□ -2.85
SNORA40.15-201ENST00000516884 TNFP01375 233 aa-2.77□□□□□ -2.85
SNORA40.15-201ENST00000516884 SMIM6P0DI80 62 aa-2.77□□□□□ -2.85
SNORA40.15-201ENST00000516884 PSPHP78330 225 aa-2.77□□□□□ -2.85
SNORA40.15-201ENST00000516884 TMEM78Q5T7P6 136 aa-2.77□□□□□ -2.85
SNORA40.15-201ENST00000516884 TMED4Q7Z7H5 227 aa-2.77□□□□□ -2.85
SNORA40.15-201ENST00000516884 THEM6Q8WUY1 208 aa-2.77□□□□□ -2.85
SNORA40.15-201ENST00000516884 TRAPPC2LQ9UL33 140 aa-2.77□□□□□ -2.85
SNORA40.15-201ENST00000516884 LRRC37A2A6NM11 1700 aa-2.78□□□□□ -2.85
SNORA40.15-201ENST00000516884 FAM107AO95990 144 aa-2.78□□□□□ -2.85
SNORA40.15-201ENST00000516884 DEFB112Q30KQ8 113 aa-2.78□□□□□ -2.85
SNORA40.15-201ENST00000516884 J3QLW9 94 aa-2.79□□□□□ -2.86
SNORA40.15-201ENST00000516884 PARVGQ9HBI0 331 aa-2.79□□□□□ -2.86
SNORA40.15-201ENST00000516884 NDUFA12Q9UI09 145 aa-2.79□□□□□ -2.86
SNORA40.15-201ENST00000516884 E7EQ34 232 aa-2.8□□□□□ -2.86
SNORA40.15-201ENST00000516884 CCL18P55774 89 aa-2.8□□□□□ -2.86
SNORA40.15-201ENST00000516884 LINC01545Q5VT33 79 aa-2.8□□□□□ -2.86
SNORA40.15-201ENST00000516884 C10orf82Q8WW14 230 aa-2.8□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms