RNA–Protein interactions for RNA: ENST00000516538.1

RNU6-1046P-201, Transcript of RNA, U6 small nuclear 1046, pseudogene, humanhuman

BASIC

Gene RNU6-1046P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1046P-201ENST00000516538 UFC1Q9Y3C8 167 aa-2.23□□□□□ -2.77
RNU6-1046P-201ENST00000516538 IFT172Q9UG01 1749 aa-2.23□□□□□ -2.77
RNU6-1046P-201ENST00000516538 VPS13DQ5THJ4 4388 aa-2.23□□□□□ -2.77
RNU6-1046P-201ENST00000516538 LRP6O75581 1613 aa-2.24□□□□□ -2.77
RNU6-1046P-201ENST00000516538 PTPRMP28827 1452 aa-2.24□□□□□ -2.77
RNU6-1046P-201ENST00000516538 TRAV12-3A0A0B4J271 114 aa-2.24□□□□□ -2.77
RNU6-1046P-201ENST00000516538 CCDC179H3BU77 68 aa-2.24□□□□□ -2.77
RNU6-1046P-201ENST00000516538 IFNA1P01562 189 aa-2.24□□□□□ -2.77
RNU6-1046P-201ENST00000516538 HIST1H1BP16401 226 aaKnown RBP-2.24□□□□□ -2.77
RNU6-1046P-201ENST00000516538 TMED2Q15363 201 aa-2.24□□□□□ -2.77
RNU6-1046P-201ENST00000516538 SDF2Q99470 211 aa-2.24□□□□□ -2.77
RNU6-1046P-201ENST00000516538 GOLGA4Q13439 2230 aaKnown RBP-2.24□□□□□ -2.77
RNU6-1046P-201ENST00000516538 ARFGEF1Q9Y6D6 1849 aa-2.24□□□□□ -2.77
RNU6-1046P-201ENST00000516538 BIRC6Q9NR09 4857 aa-2.24□□□□□ -2.77
RNU6-1046P-201ENST00000516538 FAT3Q8TDW7 4589 aa-2.25□□□□□ -2.77
RNU6-1046P-201ENST00000516538 H0YJX3 145 aa-2.25□□□□□ -2.77
RNU6-1046P-201ENST00000516538 BAGE3Q86Y29 109 aa-2.25□□□□□ -2.77
RNU6-1046P-201ENST00000516538 FAM24BQ8N5W8 94 aa-2.25□□□□□ -2.77
RNU6-1046P-201ENST00000516538 DYDC1Q8WWB3 177 aa-2.25□□□□□ -2.77
RNU6-1046P-201ENST00000516538 SLC35B3Q9H1N7 401 aa-2.25□□□□□ -2.77
RNU6-1046P-201ENST00000516538 SONP18583 2426 aaKnown RBP-2.26□□□□□ -2.77
RNU6-1046P-201ENST00000516538 CBLN4Q9NTU7 201 aa-2.26□□□□□ -2.77
RNU6-1046P-201ENST00000516538 FER1L6Q2WGJ9 1857 aa-2.26□□□□□ -2.77
RNU6-1046P-201ENST00000516538 A2MP01023 1474 aa-2.26□□□□□ -2.77
RNU6-1046P-201ENST00000516538 PAPPAQ13219 1627 aa-2.27□□□□□ -2.77
RNU6-1046P-201ENST00000516538 J3KT08 172 aa-2.27□□□□□ -2.77
RNU6-1046P-201ENST00000516538 DHRS4L2Q6PKH6 230 aa-2.27□□□□□ -2.77
RNU6-1046P-201ENST00000516538 IBTKQ9P2D0 1353 aaPredicted RBP-2.27□□□□□ -2.77
RNU6-1046P-201ENST00000516538 PKD1P98161 4303 aa-2.27□□□□□ -2.77
RNU6-1046P-201ENST00000516538 FAM92AA1XBS5 289 aa-2.28□□□□□ -2.77
RNU6-1046P-201ENST00000516538 M0QZK8 103 aa-2.28□□□□□ -2.77
RNU6-1046P-201ENST00000516538 RPL22P35268 128 aaKnown RBP-2.28□□□□□ -2.77
RNU6-1046P-201ENST00000516538 DEFB135Q30KP9 77 aa-2.28□□□□□ -2.77
RNU6-1046P-201ENST00000516538 SNX29P2Q8IUI4 249 aa-2.28□□□□□ -2.77
RNU6-1046P-201ENST00000516538 CEP19Q96LK0 163 aa-2.28□□□□□ -2.77
RNU6-1046P-201ENST00000516538 HTTP42858 3142 aa-2.28□□□□□ -2.77
RNU6-1046P-201ENST00000516538 YTHDC2Q9H6S0 1430 aaKnown RBP-2.28□□□□□ -2.77
RNU6-1046P-201ENST00000516538 UHRF1BP1LA0JNW5 1464 aa-2.28□□□□□ -2.77
RNU6-1046P-201ENST00000516538 MYH3P11055 1940 aa-2.29□□□□□ -2.78
RNU6-1046P-201ENST00000516538 SLC25A5P05141 298 aaKnown RBP-2.29□□□□□ -2.78
RNU6-1046P-201ENST00000516538 TCTAP57738 103 aa-2.29□□□□□ -2.78
RNU6-1046P-201ENST00000516538 NOP16Q9Y3C1 178 aaKnown RBP-2.29□□□□□ -2.78
RNU6-1046P-201ENST00000516538 AKAP9Q99996 3911 aa-2.3□□□□□ -2.78
RNU6-1046P-201ENST00000516538 PSPHP78330 225 aa-2.3□□□□□ -2.78
RNU6-1046P-201ENST00000516538 ATP6V0E2Q8NHE4 81 aa-2.3□□□□□ -2.78
RNU6-1046P-201ENST00000516538 MAFIPQ8WZ33 124 aa-2.3□□□□□ -2.78
RNU6-1046P-201ENST00000516538 CFAP53Q96M91 514 aa-2.3□□□□□ -2.78
RNU6-1046P-201ENST00000516538 LINC00472Q9H8W2 130 aa-2.3□□□□□ -2.78
RNU6-1046P-201ENST00000516538 KIAA1109Q2LD37 5005 aa-2.3□□□□□ -2.78
RNU6-1046P-201ENST00000516538 LAMA2P24043 3122 aaKnown RBP-2.31□□□□□ -2.78
RNU6-1046P-201ENST00000516538 BORCS7-ASMTA0A0B4J1R7 106 aa-2.31□□□□□ -2.78
RNU6-1046P-201ENST00000516538 NIPSNAP2O75323 286 aa-2.31□□□□□ -2.78
RNU6-1046P-201ENST00000516538 FAM107AO95990 144 aa-2.31□□□□□ -2.78
RNU6-1046P-201ENST00000516538 GNG3P63215 75 aa-2.31□□□□□ -2.78
RNU6-1046P-201ENST00000516538 SPRR2FQ96RM1 72 aa-2.31□□□□□ -2.78
RNU6-1046P-201ENST00000516538 ZCCHC11Q5TAX3 1644 aaKnown RBP-2.31□□□□□ -2.78
RNU6-1046P-201ENST00000516538 CTXN2P0C2S0 81 aa-2.32□□□□□ -2.78
RNU6-1046P-201ENST00000516538 DEFB105AQ8NG35 78 aa-2.32□□□□□ -2.78
RNU6-1046P-201ENST00000516538 CCDC32Q9BV29 185 aa-2.32□□□□□ -2.78
RNU6-1046P-201ENST00000516538 MED31Q9Y3C7 131 aa-2.32□□□□□ -2.78
RNU6-1046P-201ENST00000516538 PFDN1O60925 122 aa-2.33□□□□□ -2.78
RNU6-1046P-201ENST00000516538 REEP5Q00765 189 aa-2.33□□□□□ -2.78
RNU6-1046P-201ENST00000516538 YPEL1O60688 119 aa-2.34□□□□□ -2.78
RNU6-1046P-201ENST00000516538 TCRAP04437 139 aa-2.34□□□□□ -2.78
RNU6-1046P-201ENST00000516538 HRCT1Q6UXD1 115 aa-2.34□□□□□ -2.78
RNU6-1046P-201ENST00000516538 SMIM20Q8N5G0 67 aa-2.34□□□□□ -2.78
RNU6-1046P-201ENST00000516538 NBASA2RRP1 2371 aa-2.35□□□□□ -2.78
RNU6-1046P-201ENST00000516538 TEP1Q99973 2627 aaKnown RBP-2.35□□□□□ -2.78
RNU6-1046P-201ENST00000516538 MED23Q9ULK4 1368 aa-2.35□□□□□ -2.78
RNU6-1046P-201ENST00000516538 J3QLW9 94 aa-2.35□□□□□ -2.79
RNU6-1046P-201ENST00000516538 RBP4P02753 201 aa-2.35□□□□□ -2.79
RNU6-1046P-201ENST00000516538 DCUN1D2Q6PH85 259 aa-2.35□□□□□ -2.79
RNU6-1046P-201ENST00000516538 SMIM4Q8WVI0 70 aa-2.35□□□□□ -2.79
RNU6-1046P-201ENST00000516538 LRRC37A2A6NM11 1700 aa-2.35□□□□□ -2.79
RNU6-1046P-201ENST00000516538 DNAH9Q9NYC9 4486 aa-2.36□□□□□ -2.79
RNU6-1046P-201ENST00000516538 DEFB123Q8N688 67 aa-2.36□□□□□ -2.79
RNU6-1046P-201ENST00000516538 LRRC37A3O60309 1634 aa-2.36□□□□□ -2.79
RNU6-1046P-201ENST00000516538 UBE2D1P51668 147 aa-2.37□□□□□ -2.79
RNU6-1046P-201ENST00000516538 MRPS25P82663 173 aaKnown RBP-2.37□□□□□ -2.79
RNU6-1046P-201ENST00000516538 TMEM91Q6ZNR0 172 aa-2.37□□□□□ -2.79
RNU6-1046P-201ENST00000516538 ATP11AUNQ6ZP68 121 aa-2.37□□□□□ -2.79
RNU6-1046P-201ENST00000516538 TMED4Q7Z7H5 227 aa-2.37□□□□□ -2.79
RNU6-1046P-201ENST00000516538 CUBNO60494 3623 aa-2.37□□□□□ -2.79
RNU6-1046P-201ENST00000516538 CLPSL1A2RUU4 121 aa-2.38□□□□□ -2.79
RNU6-1046P-201ENST00000516538 HSD11B1P28845 292 aa-2.38□□□□□ -2.79
RNU6-1046P-201ENST00000516538 DEFB112Q30KQ8 113 aa-2.38□□□□□ -2.79
RNU6-1046P-201ENST00000516538 RPRMQ9NS64 109 aa-2.38□□□□□ -2.79
RNU6-1046P-201ENST00000516538 TRAPPC2LQ9UL33 140 aa-2.38□□□□□ -2.79
RNU6-1046P-201ENST00000516538 KDM5CP41229 1560 aa-2.39□□□□□ -2.79
RNU6-1046P-201ENST00000516538 LAMA1P25391 3075 aa-2.39□□□□□ -2.79
RNU6-1046P-201ENST00000516538 DNAH2Q9P225 4427 aa-2.39□□□□□ -2.79
RNU6-1046P-201ENST00000516538 DNAJC15Q9Y5T4 150 aa-2.39□□□□□ -2.79
RNU6-1046P-201ENST00000516538 TNRC18O15417 2968 aaPredicted RBP-2.4□□□□□ -2.79
RNU6-1046P-201ENST00000516538 IFNA17P01571 189 aa-2.4□□□□□ -2.79
RNU6-1046P-201ENST00000516538 STX12Q86Y82 276 aa-2.4□□□□□ -2.79
RNU6-1046P-201ENST00000516538 THEM6Q8WUY1 208 aa-2.4□□□□□ -2.79
RNU6-1046P-201ENST00000516538 AGPAT4-IT1Q9H0P7 198 aa-2.4□□□□□ -2.79
RNU6-1046P-201ENST00000516538 GAPVD1Q14C86 1478 aa-2.4□□□□□ -2.79
RNU6-1046P-201ENST00000516538 KDM5AP29375 1690 aaKnown RBP-2.41□□□□□ -2.79
RNU6-1046P-201ENST00000516538 E7EQ34 232 aa-2.41□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms