RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 OR10AG1Q8NH19 301 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 C10orf105Q8TEF2 133 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 TMEM141Q96I45 108 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 DSCR8Q96T75 97 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 S100A13Q99584 98 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MGST2Q99735 147 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 REG4Q9BYZ8 158 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CYP4F30PQ9H0H9 118 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 DPH3P1Q9H4G8 78 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 C22orf24Q9Y442 160 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MED12Q93074 2177 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MUC22E2RYF6 1773 aaPredicted RBP0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 RGPD8O14715 1765 aaPredicted RBP0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 LTN1O94822 1766 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 RGPD5Q99666 1765 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 SCN11AQ9UI33 1791 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 BTAF1O14981 1849 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 SIP14410 1827 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PLIN4Q96Q06 1357 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 DLG5Q8TDM6 1919 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CEP192Q8TEP8 1941 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ATP10BO94823 1461 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 NCOA2Q15596 1464 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 KCPQ6ZWJ8 1503 aa0.54□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MDC1Q14676 2089 aaKnown RBP0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ABCA8O94911 1581 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 INO80Q9ULG1 1556 aaPredicted RBP0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 LRRC37A3O60309 1634 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 UNC13CQ8NB66 2214 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MYOM1P52179 1685 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ADAMTS7Q9UKP4 1686 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 KNDC1Q76NI1 1749 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 UBR1Q8IWV7 1749 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 RGPD2P0DJD1 1756 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PDCD11Q14690 1871 aaKnown RBP0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 TRBV7-1A0A0A6YYK4 115 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 LOC107984156A0A0G2JMH3 177 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 TRBV10-1A0A0K0K1A3 114 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 A6NIN4 97 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 C2orf70A6NJV1 201 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 B4DSR2 109 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 IGKCP01834 107 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CCKP06307 115 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 UBE2G1P62253 170 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CCL8P80075 99 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MIR22HGQ0VDD5 57 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 INSL4Q14641 139 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PEA15Q15121 130 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 DEFB113Q30KQ7 82 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ZNF791Q3KP31 576 aaPredicted RBP0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 C9orf116Q5BN46 136 aaPredicted RBP0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 C1orf137Q5JT78 98 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 RPL7L1Q6DKI1 246 aaKnown RBP0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ZCCHC23Q6ZST2 131 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ARL17AQ8IVW1 177 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 C9orf163Q8N9P6 203 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 C10orf82Q8WW14 230 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 TSLPQ969D9 159 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 TRGV9Q99603 122 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PMCHL2Q9BQD1 86 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PRO1933Q9H354 126 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 NPVFQ9HCQ7 196 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CDC42SE1Q9NRR8 79 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 UQCR10Q9UDW1 63 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 NDUFA12Q9UI09 145 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CCL26Q9Y258 94 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 SPTBP11277 2137 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ANKARQ7Z5J8 1434 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ALPK2Q86TB3 2170 aa0.53□□□□□ -2.32
SCARNA16.2-201ENST00000516520 NLRP1Q9C000 1473 aa0.53□□□□□ -2.33
SCARNA16.2-201ENST00000516520 MLH3Q9UHC1 1453 aa0.53□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SHANK2Q9UPX8 1470 aa0.53□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ADGRB3O60242 1522 aa0.53□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ABCC1P33527 1531 aa0.53□□□□□ -2.33
SCARNA16.2-201ENST00000516520 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.53□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TOP2BQ02880 1626 aa0.53□□□□□ -2.33
SCARNA16.2-201ENST00000516520 MROH1Q8NDA8 1641 aa0.53□□□□□ -2.33
SCARNA16.2-201ENST00000516520 KIF21AQ7Z4S6 1674 aa0.53□□□□□ -2.33
SCARNA16.2-201ENST00000516520 COL4A2P08572 1712 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 NRXN2Q9P2S2 1712 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 STRCP1A6NGW2 1772 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 DLEC1Q9Y238 1755 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 AFDNP55196 1824 aaKnown RBP0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 PCDH15Q96QU1 1955 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CR1P17927 2039 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ESPL1Q14674 2120 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TET1Q8NFU7 2136 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ABCA4P78363 2273 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 FN1P02751 2386 aaKnown RBP0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TRAV23DV6A0A075B6W5 121 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TRAV13-2A0A0B4J235 113 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TRAV17A0A0B4J275 112 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 A0A0J9YY99 117 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CXorf51AA0A1B0GTR3 108 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 IGLC7A0M8Q6 106 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TMEM30CPA0ZSE6 113 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SYS1-DBNDD2H3BUS1 97 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 GNGT2O14610 69 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 NUPR1O60356 82 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 BCE1O60756 84 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms