RNA–Protein interactions for RNA: ENST00000515810.1

ATR-209, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-209ENST00000515810 CDK13Q14004 1512 aaKnown RBP0.48□□□□□ -2.33
ATR-209ENST00000515810 PLXNA1Q9UIW2 1896 aa0.48□□□□□ -2.33
ATR-209ENST00000515810 PHIPQ8WWQ0 1821 aa0.48□□□□□ -2.33
ATR-209ENST00000515810 NALCNQ8IZF0 1738 aa0.48□□□□□ -2.33
ATR-209ENST00000515810 A6NIN4 97 aa0.48□□□□□ -2.33
ATR-209ENST00000515810 SNCGO76070 127 aa0.48□□□□□ -2.33
ATR-209ENST00000515810 PIPP12273 146 aaPredicted RBP0.48□□□□□ -2.33
ATR-209ENST00000515810 HIST1H1DP16402 221 aaKnown RBP0.48□□□□□ -2.33
ATR-209ENST00000515810 FGF7P21781 194 aa0.48□□□□□ -2.33
ATR-209ENST00000515810 UBE2D1P51668 147 aa0.48□□□□□ -2.33
ATR-209ENST00000515810 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.48□□□□□ -2.33
ATR-209ENST00000515810 SPTSSBQ8NFR3 76 aa0.48□□□□□ -2.33
ATR-209ENST00000515810 SMIM11BQ8TCY0 68 aa0.48□□□□□ -2.33
ATR-209ENST00000515810 TMEM203Q969S6 136 aa0.48□□□□□ -2.33
ATR-209ENST00000515810 SPTSSAQ969W0 71 aa0.48□□□□□ -2.33
ATR-209ENST00000515810 C2orf88Q9BSF0 95 aa0.48□□□□□ -2.33
ATR-209ENST00000515810 SEC11CQ9BY50 192 aa0.48□□□□□ -2.33
ATR-209ENST00000515810 RERGLQ9H628 205 aa0.48□□□□□ -2.33
ATR-209ENST00000515810 KIAA0100Q14667 2235 aaKnown RBP0.48□□□□□ -2.33
ATR-209ENST00000515810 SMG6Q86US8 1419 aaKnown RBP0.47□□□□□ -2.33
ATR-209ENST00000515810 TRGV1A0A0A0MS02 117 aa0.47□□□□□ -2.33
ATR-209ENST00000515810 LINC00587B1AMM8 73 aa0.47□□□□□ -2.33
ATR-209ENST00000515810 NDUFB6O95139 128 aa0.47□□□□□ -2.33
ATR-209ENST00000515810 IFNGP01579 166 aa0.47□□□□□ -2.33
ATR-209ENST00000515810 BTG2P78543 158 aa0.47□□□□□ -2.33
ATR-209ENST00000515810 WHAMMP3Q1A5X7 153 aa0.47□□□□□ -2.33
ATR-209ENST00000515810 PP6455Q8WZ26 134 aa0.47□□□□□ -2.33
ATR-209ENST00000515810 AGPAT4-IT1Q9H0P7 198 aa0.47□□□□□ -2.33
ATR-209ENST00000515810 NAA60Q9H7X0 242 aa0.47□□□□□ -2.33
ATR-209ENST00000515810 LAMB1P07942 1786 aa0.47□□□□□ -2.33
ATR-209ENST00000515810 CFTRP13569 1480 aa0.47□□□□□ -2.33
ATR-209ENST00000515810 BCL9LQ86UU0 1499 aa0.47□□□□□ -2.33
ATR-209ENST00000515810 MBD5Q9P267 1494 aa0.47□□□□□ -2.33
ATR-209ENST00000515810 DAPK1P53355 1430 aa0.47□□□□□ -2.33
ATR-209ENST00000515810 MED13LQ71F56 2210 aa0.46□□□□□ -2.34
ATR-209ENST00000515810 EIF4G3O43432 1585 aaKnown RBP0.46□□□□□ -2.34
ATR-209ENST00000515810 PIGBOS1A0A0B4J2F0 54 aa0.46□□□□□ -2.34
ATR-209ENST00000515810 LOC100130705A0A1B0GUX0 176 aa0.46□□□□□ -2.34
ATR-209ENST00000515810 CORTO00230 105 aa0.46□□□□□ -2.34
ATR-209ENST00000515810 IFNA17P01571 189 aa0.46□□□□□ -2.34
ATR-209ENST00000515810 AKAIN1P0CW23 69 aa0.46□□□□□ -2.34
ATR-209ENST00000515810 ACYP2P14621 99 aa0.46□□□□□ -2.34
ATR-209ENST00000515810 CBLN1P23435 193 aa0.46□□□□□ -2.34
ATR-209ENST00000515810 Q56UQ5 140 aa0.46□□□□□ -2.34
ATR-209ENST00000515810 CGREF1Q99674 301 aa0.46□□□□□ -2.34
ATR-209ENST00000515810 SCN3BQ9NY72 215 aa0.46□□□□□ -2.34
ATR-209ENST00000515810 GNG8Q9UK08 70 aa0.46□□□□□ -2.34
ATR-209ENST00000515810 SERP1Q9Y6X1 66 aa0.46□□□□□ -2.34
ATR-209ENST00000515810 ZNF518AQ6AHZ1 1483 aa0.46□□□□□ -2.34
ATR-209ENST00000515810 MACF1Q9UPN3 7388 aaKnown RBP0.45□□□□□ -2.34
ATR-209ENST00000515810 USP24Q9UPU5 2620 aa0.45□□□□□ -2.34
ATR-209ENST00000515810 FAM135AQ9P2D6 1515 aa0.45□□□□□ -2.34
ATR-209ENST00000515810 SPAARA0A1B0GVQ0 90 aa0.45□□□□□ -2.34
ATR-209ENST00000515810 F6UZH7 168 aa0.45□□□□□ -2.34
ATR-209ENST00000515810 APOC4-APOC2K7ER74 178 aa0.45□□□□□ -2.34
ATR-209ENST00000515810 SNAPC5O75971 98 aa0.45□□□□□ -2.34
ATR-209ENST00000515810 TNFP01375 233 aa0.45□□□□□ -2.34
ATR-209ENST00000515810 APOC2P02655 101 aa0.45□□□□□ -2.34
ATR-209ENST00000515810 EDDM3BP56851 147 aa0.45□□□□□ -2.34
ATR-209ENST00000515810 MRPS10P82664 201 aaKnown RBP0.45□□□□□ -2.34
ATR-209ENST00000515810 C12orf73Q69YU5 71 aa0.45□□□□□ -2.34
ATR-209ENST00000515810 Q6AWC8 147 aa0.45□□□□□ -2.34
ATR-209ENST00000515810 LSM10Q969L4 123 aaKnown RBP0.45□□□□□ -2.34
ATR-209ENST00000515810 SPANXDQ9BXN6 97 aa0.45□□□□□ -2.34
ATR-209ENST00000515810 RIMS1Q86UR5 1692 aaKnown RBP0.45□□□□□ -2.34
ATR-209ENST00000515810 PARP14Q460N5 1801 aa0.45□□□□□ -2.34
ATR-209ENST00000515810 BDP1A6H8Y1 2624 aa0.44□□□□□ -2.34
ATR-209ENST00000515810 A2ML1A8K2U0 1454 aa0.44□□□□□ -2.34
ATR-209ENST00000515810 TRBV10-3A0A0K0K1G6 114 aa0.44□□□□□ -2.34
ATR-209ENST00000515810 MIF4GDA9UHW6 222 aaKnown RBP0.44□□□□□ -2.34
ATR-209ENST00000515810 S100A1P23297 94 aa0.44□□□□□ -2.34
ATR-209ENST00000515810 S100PP25815 95 aa0.44□□□□□ -2.34
ATR-209ENST00000515810 GNG4P50150 75 aa0.44□□□□□ -2.34
ATR-209ENST00000515810 TPPP2P59282 170 aa0.44□□□□□ -2.34
ATR-209ENST00000515810 RBM3P98179 157 aaKnown RBP0.44□□□□□ -2.34
ATR-209ENST00000515810 C8orf59Q8N0T1 100 aaPredicted RBP0.44□□□□□ -2.34
ATR-209ENST00000515810 PPP3R2Q96LZ3 170 aa0.44□□□□□ -2.34
ATR-209ENST00000515810 JMJD1CQ15652 2540 aa0.44□□□□□ -2.34
ATR-209ENST00000515810 FAT4Q6V0I7 4981 aa0.44□□□□□ -2.34
ATR-209ENST00000515810 NWD2Q9ULI1 1742 aa0.44□□□□□ -2.34
ATR-209ENST00000515810 KTN1Q86UP2 1357 aaKnown RBP0.44□□□□□ -2.34
ATR-209ENST00000515810 CUL7Q14999 1698 aa0.43□□□□□ -2.34
ATR-209ENST00000515810 MYOM2P54296 1465 aa0.43□□□□□ -2.34
ATR-209ENST00000515810 IFT140Q96RY7 1462 aa0.43□□□□□ -2.34
ATR-209ENST00000515810 C20orf202A1L168 122 aa0.43□□□□□ -2.34
ATR-209ENST00000515810 NMBP08949 121 aa0.43□□□□□ -2.34
ATR-209ENST00000515810 PPP3R1P63098 170 aa0.43□□□□□ -2.34
ATR-209ENST00000515810 CCL8P80075 99 aa0.43□□□□□ -2.34
ATR-209ENST00000515810 CATR1Q13166 79 aa0.43□□□□□ -2.34
ATR-209ENST00000515810 INSL4Q14641 139 aa0.43□□□□□ -2.34
ATR-209ENST00000515810 MRPL54Q6P161 138 aaKnown RBP0.43□□□□□ -2.34
ATR-209ENST00000515810 ZNF818PQ6ZRF7 136 aa0.43□□□□□ -2.34
ATR-209ENST00000515810 Q8N8P6 123 aa0.43□□□□□ -2.34
ATR-209ENST00000515810 TCEAL7Q9BRU2 100 aa0.43□□□□□ -2.34
ATR-209ENST00000515810 IER3IP1Q9Y5U9 82 aa0.43□□□□□ -2.34
ATR-209ENST00000515810 F5P12259 2224 aa0.43□□□□□ -2.34
ATR-209ENST00000515810 QRICH2Q9H0J4 1663 aa0.43□□□□□ -2.34
ATR-209ENST00000515810 PATJQ8NI35 1801 aa0.43□□□□□ -2.34
ATR-209ENST00000515810 ARFGEF1Q9Y6D6 1849 aa0.43□□□□□ -2.34
ATR-209ENST00000515810 MYH8P13535 1937 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms