RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 KRTAP10-1P60331 282 aa16.31■□□□□ 0.2
SNF8-213ENST00000514929 BLOC1S1P78537 153 aa16.31■□□□□ 0.2
SNF8-213ENST00000514929 Q8N814 137 aa16.31■□□□□ 0.2
SNF8-213ENST00000514929 NTN5Q8WTR8 489 aaPredicted RBP16.31■□□□□ 0.2
SNF8-213ENST00000514929 CACNG7P62955 275 aa16.3■□□□□ 0.2
SNF8-213ENST00000514929 CHCHD7Q9BUK0 85 aa16.3■□□□□ 0.2
SNF8-213ENST00000514929 KLK12Q9UKR0 248 aa16.3■□□□□ 0.2
SNF8-213ENST00000514929 ABCA13Q86UQ4 5058 aa16.3■□□□□ 0.2
SNF8-213ENST00000514929 TRBV6-8A0A0A6YYG3 113 aa16.29■□□□□ 0.2
SNF8-213ENST00000514929 F2Z2F3 143 aa16.29■□□□□ 0.2
SNF8-213ENST00000514929 MGPP08493 103 aa16.29■□□□□ 0.2
SNF8-213ENST00000514929 ELOBQ15370 118 aa16.29■□□□□ 0.2
SNF8-213ENST00000514929 RMI2Q96E14 147 aa16.29■□□□□ 0.2
SNF8-213ENST00000514929 TMEM262E9PQX1 116 aa16.28■□□□□ 0.2
SNF8-213ENST00000514929 COX11Q9Y6N1 276 aa16.28■□□□□ 0.2
SNF8-213ENST00000514929 NUDT10Q8NFP7 164 aa16.27■□□□□ 0.2
SNF8-213ENST00000514929 NUDT11Q96G61 164 aa16.27■□□□□ 0.2
SNF8-213ENST00000514929 LYZL1Q6UWQ5 148 aa16.26■□□□□ 0.19
SNF8-213ENST00000514929 UBE2WQ96B02 151 aa16.26■□□□□ 0.19
SNF8-213ENST00000514929 IGKV2D-24A0A075B6R9 120 aa16.25■□□□□ 0.19
SNF8-213ENST00000514929 TMEM97Q5BJF2 176 aa16.25■□□□□ 0.19
SNF8-213ENST00000514929 OCC1Q8TAD7 63 aa16.25■□□□□ 0.19
SNF8-213ENST00000514929 DNAJC30Q96LL9 226 aa16.25■□□□□ 0.19
SNF8-213ENST00000514929 CHCHD5Q9BSY4 110 aa16.25■□□□□ 0.19
SNF8-213ENST00000514929 H7C1H1 209 aa16.24■□□□□ 0.19
SNF8-213ENST00000514929 LECT2O14960 151 aa16.24■□□□□ 0.19
SNF8-213ENST00000514929 TRGC1P0CF51 173 aa16.24■□□□□ 0.19
SNF8-213ENST00000514929 XGP55808 180 aa16.24■□□□□ 0.19
SNF8-213ENST00000514929 WFDC2Q14508 124 aa16.24■□□□□ 0.19
SNF8-213ENST00000514929 RNASE7Q9H1E1 156 aaKnown RBP16.24■□□□□ 0.19
SNF8-213ENST00000514929 TMEM250H0YL14 139 aa16.23■□□□□ 0.19
SNF8-213ENST00000514929 K7EN84 100 aa16.23■□□□□ 0.19
SNF8-213ENST00000514929 NKX2-5P52952 324 aaPredicted RBP16.23■□□□□ 0.19
SNF8-213ENST00000514929 SUMO4Q6EEV6 95 aa16.23■□□□□ 0.19
SNF8-213ENST00000514929 RPP21Q9H633 154 aaKnown RBP16.23■□□□□ 0.19
SNF8-213ENST00000514929 M0QY20 66 aa16.22■□□□□ 0.19
SNF8-213ENST00000514929 NTF3P20783 257 aa16.22■□□□□ 0.19
SNF8-213ENST00000514929 PKIAP61925 76 aa16.22■□□□□ 0.19
SNF8-213ENST00000514929 LYPD6BQ8NI32 183 aa16.22■□□□□ 0.19
SNF8-213ENST00000514929 BAALCQ8WXS3 180 aa16.22■□□□□ 0.19
SNF8-213ENST00000514929 CTRLP40313 264 aa16.21■□□□□ 0.19
SNF8-213ENST00000514929 Q0VG73 95 aa16.21■□□□□ 0.19
SNF8-213ENST00000514929 MPV17L2Q567V2 206 aa16.21■□□□□ 0.19
SNF8-213ENST00000514929 NTM-AS1Q6ZSK4 140 aa16.21■□□□□ 0.19
SNF8-213ENST00000514929 DPH3P1Q9H4G8 78 aa16.21■□□□□ 0.19
SNF8-213ENST00000514929 CEBPGP53567 150 aa16.2■□□□□ 0.18
SNF8-213ENST00000514929 WDR73Q6P4I2 378 aa16.2■□□□□ 0.18
SNF8-213ENST00000514929 C15orf54Q8N8G6 183 aa16.2■□□□□ 0.18
SNF8-213ENST00000514929 A0A1B0GVG6 124 aa16.19■□□□□ 0.18
SNF8-213ENST00000514929 CRPP02741 224 aa16.19■□□□□ 0.18
SNF8-213ENST00000514929 TWIST1Q15672 202 aa16.19■□□□□ 0.18
SNF8-213ENST00000514929 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.18■□□□□ 0.18
SNF8-213ENST00000514929 TRBV25-1A0A075B6N4 114 aa16.18■□□□□ 0.18
SNF8-213ENST00000514929 EPM2AB3EWF7 344 aa16.18■□□□□ 0.18
SNF8-213ENST00000514929 ANGP03950 147 aaKnown RBP16.18■□□□□ 0.18
SNF8-213ENST00000514929 RASL11AQ6T310 242 aa16.18■□□□□ 0.18
SNF8-213ENST00000514929 TMEM70Q9BUB7 260 aa16.18■□□□□ 0.18
SNF8-213ENST00000514929 EIF5A2Q9GZV4 153 aaKnown RBP16.18■□□□□ 0.18
SNF8-213ENST00000514929 ATRAIDQ6UW56 229 aa16.17■□□□□ 0.18
SNF8-213ENST00000514929 Q8N976 141 aa16.17■□□□□ 0.18
SNF8-213ENST00000514929 C1orf43Q9BWL3 253 aa16.17■□□□□ 0.18
SNF8-213ENST00000514929 GAGE6Q13070 117 aa16.16■□□□□ 0.18
SNF8-213ENST00000514929 ENHOQ6UWT2 76 aa16.16■□□□□ 0.18
SNF8-213ENST00000514929 CNFNQ9BYD5 112 aa16.16■□□□□ 0.18
SNF8-213ENST00000514929 IGHV1-24A0A0C4DH33 117 aa16.15■□□□□ 0.18
SNF8-213ENST00000514929 GATCO43716 136 aaKnown RBP16.15■□□□□ 0.18
SNF8-213ENST00000514929 NIT2Q9NQR4 276 aa16.15■□□□□ 0.18
SNF8-213ENST00000514929 HAMPP81172 84 aa16.14■□□□□ 0.17
SNF8-213ENST00000514929 IQCJQ1A5X6 159 aa16.14■□□□□ 0.17
SNF8-213ENST00000514929 RBX1P62877 108 aa16.13■□□□□ 0.17
SNF8-213ENST00000514929 FAM231DQ6ZW35 169 aa16.13■□□□□ 0.17
SNF8-213ENST00000514929 GTSF1Q8WW33 167 aa16.13■□□□□ 0.17
SNF8-213ENST00000514929 FRZBQ92765 325 aa16.13■□□□□ 0.17
SNF8-213ENST00000514929 SMIM15Q7Z3B0 74 aa16.12■□□□□ 0.17
SNF8-213ENST00000514929 FAM210AQ96ND0 272 aa16.12■□□□□ 0.17
SNF8-213ENST00000514929 SMIM7Q9BQ49 75 aa16.12■□□□□ 0.17
SNF8-213ENST00000514929 A8MWL6 223 aa16.11■□□□□ 0.17
SNF8-213ENST00000514929 SMR3BP02814 79 aaPredicted RBP16.11■□□□□ 0.17
SNF8-213ENST00000514929 MIAQ16674 131 aa16.11■□□□□ 0.17
SNF8-213ENST00000514929 NDUFS6O75380 124 aaKnown RBP16.09■□□□□ 0.17
SNF8-213ENST00000514929 Q5VSD8 79 aa16.09■□□□□ 0.17
SNF8-213ENST00000514929 CLPSL2Q6UWE3 100 aa16.09■□□□□ 0.17
SNF8-213ENST00000514929 LINC00269Q8N2A0 174 aa16.09■□□□□ 0.17
SNF8-213ENST00000514929 PGLYRP4Q96LB8 373 aa16.09■□□□□ 0.17
SNF8-213ENST00000514929 TMEM243Q9BU79 118 aa16.09■□□□□ 0.17
SNF8-213ENST00000514929 FAM30AQ9NZY2 134 aa16.09■□□□□ 0.17
SNF8-213ENST00000514929 ZNF727A8MUV8 499 aa16.08■□□□□ 0.16
SNF8-213ENST00000514929 PRR34Q9NV39 138 aa16.08■□□□□ 0.16
SNF8-213ENST00000514929 TRAV26-2A0A0B4J265 109 aa16.07■□□□□ 0.16
SNF8-213ENST00000514929 HLA-DQA1P01909 254 aa16.07■□□□□ 0.16
SNF8-213ENST00000514929 SRP19P09132 144 aaKnown RBP16.07■□□□□ 0.16
SNF8-213ENST00000514929 C14orf177Q52M58 125 aa16.07■□□□□ 0.16
SNF8-213ENST00000514929 CT83Q5H943 113 aa16.07■□□□□ 0.16
SNF8-213ENST00000514929 LINC01551Q86U37 167 aa16.07■□□□□ 0.16
SNF8-213ENST00000514929 GATD1Q8NB37 220 aa16.07■□□□□ 0.16
SNF8-213ENST00000514929 DEFB104AQ8WTQ1 72 aa16.07■□□□□ 0.16
SNF8-213ENST00000514929 COTL1Q14019 142 aa16.06■□□□□ 0.16
SNF8-213ENST00000514929 BORCS7Q96B45 105 aa16.06■□□□□ 0.16
SNF8-213ENST00000514929 FOXA3P55318 350 aaPredicted RBP16.05■□□□□ 0.16
SNF8-213ENST00000514929 LINC01620Q4KN68 170 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms