RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 LINC01546A6NGU7 62 aa12.03□□□□□ -0.48
HMGCL-209ENST00000513148 CACNG7P62955 275 aa12.03□□□□□ -0.48
HMGCL-209ENST00000513148 MORN3Q6PF18 240 aaPredicted RBP12.03□□□□□ -0.48
HMGCL-209ENST00000513148 Q86TA4 180 aa12.03□□□□□ -0.48
HMGCL-209ENST00000513148 OTORQ9NRC9 128 aa12.03□□□□□ -0.48
HMGCL-209ENST00000513148 IGLL5B9A064 214 aa12.03□□□□□ -0.48
HMGCL-209ENST00000513148 DUSP14O95147 198 aaKnown RBP12.03□□□□□ -0.48
HMGCL-209ENST00000513148 GIG44P09565 113 aaPredicted RBP12.03□□□□□ -0.48
HMGCL-209ENST00000513148 WFDC2Q14508 124 aa12.03□□□□□ -0.48
HMGCL-209ENST00000513148 PCP2Q8IVA1 136 aa12.03□□□□□ -0.48
HMGCL-209ENST00000513148 CEND1Q8N111 149 aa12.03□□□□□ -0.48
HMGCL-209ENST00000513148 OR10J6PQ8NGY7 276 aa12.03□□□□□ -0.48
HMGCL-209ENST00000513148 XCL2Q9UBD3 114 aa12.03□□□□□ -0.48
HMGCL-209ENST00000513148 CYSLTR1Q9Y271 337 aa12.03□□□□□ -0.48
HMGCL-209ENST00000513148 EVI2AP22794 236 aa12.02□□□□□ -0.49
HMGCL-209ENST00000513148 IFI27P40305 119 aaPredicted RBP12.02□□□□□ -0.49
HMGCL-209ENST00000513148 FXYD2P54710 66 aa12.02□□□□□ -0.49
HMGCL-209ENST00000513148 MRPL53Q96EL3 112 aaKnown RBP12.02□□□□□ -0.49
HMGCL-209ENST00000513148 GCSHP23434 173 aa12.01□□□□□ -0.49
HMGCL-209ENST00000513148 GAGE13Q4V321 117 aa12.01□□□□□ -0.49
HMGCL-209ENST00000513148 OVOL2Q9BRP0 275 aa12.01□□□□□ -0.49
HMGCL-209ENST00000513148 CHAC1Q9BUX1 264 aa12.01□□□□□ -0.49
HMGCL-209ENST00000513148 PRO0461Q9UI25 63 aa12.01□□□□□ -0.49
HMGCL-209ENST00000513148 IGKV2-40A0A087WW87 121 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-209ENST00000513148 IGKV2D-40P01614 121 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-209ENST00000513148 NMUP48645 174 aa12.01□□□□□ -0.49
HMGCL-209ENST00000513148 SPINK13Q1W4C9 94 aa12.01□□□□□ -0.49
HMGCL-209ENST00000513148 ORMDL3Q8N138 153 aa12.01□□□□□ -0.49
HMGCL-209ENST00000513148 LYPD1Q8N2G4 141 aa12.01□□□□□ -0.49
HMGCL-209ENST00000513148 SERTM2A0A1B0GWG4 89 aa12□□□□□ -0.49
HMGCL-209ENST00000513148 SPRY2O43597 315 aa12□□□□□ -0.49
HMGCL-209ENST00000513148 ARMS2P0C7Q2 107 aa12□□□□□ -0.49
HMGCL-209ENST00000513148 ERCC8Q13216 396 aa12□□□□□ -0.49
HMGCL-209ENST00000513148 AMTNQ6UX39 209 aa12□□□□□ -0.49
HMGCL-209ENST00000513148 HUWE1Q7Z6Z7 4374 aaKnown RBP12□□□□□ -0.49
HMGCL-209ENST00000513148 IGLV2-11P01706 119 aa11.99□□□□□ -0.49
HMGCL-209ENST00000513148 FAM104BQ5XKR9 115 aa11.99□□□□□ -0.49
HMGCL-209ENST00000513148 RNF183Q96D59 192 aa11.99□□□□□ -0.49
HMGCL-209ENST00000513148 ZNF479Q96JC4 524 aa11.99□□□□□ -0.49
HMGCL-209ENST00000513148 A0A1B0GWB2 263 aa11.99□□□□□ -0.49
HMGCL-209ENST00000513148 A8MTW9 85 aa11.99□□□□□ -0.49
HMGCL-209ENST00000513148 PRELID3AQ96N28 172 aa11.99□□□□□ -0.49
HMGCL-209ENST00000513148 C1QTNF4Q9BXJ3 329 aa11.99□□□□□ -0.49
HMGCL-209ENST00000513148 HHLA3Q9XRX5 114 aa11.99□□□□□ -0.49
HMGCL-209ENST00000513148 TMEM75Q8N9X5 138 aa11.98□□□□□ -0.49
HMGCL-209ENST00000513148 TRAV12-2A0A075B6T6 113 aa11.98□□□□□ -0.49
HMGCL-209ENST00000513148 ETDBQ3ZM63 59 aa11.98□□□□□ -0.49
HMGCL-209ENST00000513148 C18orf15Q96N68 181 aa11.98□□□□□ -0.49
HMGCL-209ENST00000513148 TP53TG1Q9Y2A0 90 aa11.98□□□□□ -0.49
HMGCL-209ENST00000513148 TIMM8BQ9Y5J9 83 aaPredicted RBP11.98□□□□□ -0.49
HMGCL-209ENST00000513148 TRBV25-1A0A075B6N4 114 aa11.97□□□□□ -0.49
HMGCL-209ENST00000513148 IGHV3OR16-12A0A075B7B8 117 aa11.97□□□□□ -0.49
HMGCL-209ENST00000513148 J3KRW8 73 aa11.97□□□□□ -0.49
HMGCL-209ENST00000513148 CSNK1G2-AS1Q8NCQ2 148 aa11.97□□□□□ -0.49
HMGCL-209ENST00000513148 ERG28Q9UKR5 140 aa11.96□□□□□ -0.49
HMGCL-209ENST00000513148 D6R8Y8 96 aa11.96□□□□□ -0.5
HMGCL-209ENST00000513148 H3BMG7 143 aa11.96□□□□□ -0.5
HMGCL-209ENST00000513148 FOXI1Q12951 378 aa11.96□□□□□ -0.5
HMGCL-209ENST00000513148 GOLT1AQ6ZVE7 132 aa11.96□□□□□ -0.5
HMGCL-209ENST00000513148 Q8TAT8 98 aa11.96□□□□□ -0.5
HMGCL-209ENST00000513148 SGK494Q96LW2 274 aa11.96□□□□□ -0.5
HMGCL-209ENST00000513148 AGPAT4-IT1Q9H0P7 198 aa11.96□□□□□ -0.5
HMGCL-209ENST00000513148 ATP5LO75964 103 aa11.95□□□□□ -0.5
HMGCL-209ENST00000513148 RRN3P1Q2M238 152 aa11.95□□□□□ -0.5
HMGCL-209ENST00000513148 C12orf74Q32Q52 190 aa11.95□□□□□ -0.5
HMGCL-209ENST00000513148 TMEM78Q5T7P6 136 aa11.95□□□□□ -0.5
HMGCL-209ENST00000513148 NHP2Q9NX24 153 aaKnown RBP11.95□□□□□ -0.5
HMGCL-209ENST00000513148 ODF1Q14990 250 aa11.94□□□□□ -0.5
HMGCL-209ENST00000513148 SH2D6Q7Z4S9 175 aa11.94□□□□□ -0.5
HMGCL-209ENST00000513148 INSP01308 110 aa11.94□□□□□ -0.5
HMGCL-209ENST00000513148 C9orf47Q6ZRZ4 202 aa11.94□□□□□ -0.5
HMGCL-209ENST00000513148 COX8CQ7Z4L0 72 aa11.94□□□□□ -0.5
HMGCL-209ENST00000513148 LINC00477Q96M19 166 aa11.94□□□□□ -0.5
HMGCL-209ENST00000513148 CDIP1Q9H305 208 aa11.94□□□□□ -0.5
HMGCL-209ENST00000513148 PGPEP1Q9NXJ5 209 aa11.94□□□□□ -0.5
HMGCL-209ENST00000513148 STAB2Q8WWQ8 2551 aa11.94□□□□□ -0.5
HMGCL-209ENST00000513148 IGKCP01834 107 aa11.93□□□□□ -0.5
HMGCL-209ENST00000513148 SPINK8P0C7L1 97 aa11.93□□□□□ -0.5
HMGCL-209ENST00000513148 SPANXA1Q9NS26 97 aa11.93□□□□□ -0.5
HMGCL-209ENST00000513148 DKK2Q9UBU2 259 aa11.93□□□□□ -0.5
HMGCL-209ENST00000513148 TRAV8-1A0A0A6YYK1 113 aa11.93□□□□□ -0.5
HMGCL-209ENST00000513148 DEFB4AO15263 64 aa11.93□□□□□ -0.5
HMGCL-209ENST00000513148 FCER1GP30273 86 aa11.93□□□□□ -0.5
HMGCL-209ENST00000513148 PRNTQ86SH4 94 aa11.93□□□□□ -0.5
HMGCL-209ENST00000513148 RBAKDNA6NC62 111 aa11.92□□□□□ -0.5
HMGCL-209ENST00000513148 APOMO95445 188 aa11.92□□□□□ -0.5
HMGCL-209ENST00000513148 LEPP41159 167 aa11.92□□□□□ -0.5
HMGCL-209ENST00000513148 C1orf158Q8N1D5 194 aa11.92□□□□□ -0.5
HMGCL-209ENST00000513148 X6R8D5 127 aa11.92□□□□□ -0.5
HMGCL-209ENST00000513148 A0A0J9YWU9 116 aa11.91□□□□□ -0.5
HMGCL-209ENST00000513148 K7ERJ3 54 aa11.91□□□□□ -0.5
HMGCL-209ENST00000513148 DPM2O94777 84 aa11.91□□□□□ -0.5
HMGCL-209ENST00000513148 RBMY1A1P0DJD3 496 aaKnown RBP11.91□□□□□ -0.5
HMGCL-209ENST00000513148 RBMY1CP0DJD4 496 aa11.91□□□□□ -0.5
HMGCL-209ENST00000513148 RBMY1FQ15415 496 aaKnown RBP11.91□□□□□ -0.5
HMGCL-209ENST00000513148 TWIST1Q15672 202 aa11.91□□□□□ -0.5
HMGCL-209ENST00000513148 MRPL51Q4U2R6 128 aaKnown RBP11.91□□□□□ -0.5
HMGCL-209ENST00000513148 ODF3Q96PU9 254 aa11.91□□□□□ -0.5
HMGCL-209ENST00000513148 NXT2Q9NPJ8 142 aaKnown RBP11.91□□□□□ -0.5
HMGCL-209ENST00000513148 IGKV2D-26A0A0A0MRZ7 120 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms