RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 PRAP1Q96NZ9 151 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 C19orf12Q9NSK7 152 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 LYRM2Q9NU23 88 aaPredicted RBP-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 IL20Q9NYY1 176 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 MED11Q9P086 117 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 S4R3F8 94 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 VIRMAQ69YN4 1812 aaKnown RBP-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 DOCK1Q14185 1865 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 PAPPAQ13219 1627 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 USP54Q70EL1 1684 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 NKTRP30414 1462 aaKnown RBP-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 MBD5Q9P267 1494 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 PAPPA2Q9BXP8 1791 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 DLC1Q96QB1 1528 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 PCF11O94913 1555 aaKnown RBP-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 TRBV10-1A0A0K0K1A3 114 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 ZNF815PA8K554 130 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 NIPSNAP2O75323 286 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 CSN2P05814 226 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 SLC25A4P12235 298 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 COX4I1P13073 169 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 GCHFRP30047 84 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 TAS2R41P59536 307 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 BLCAPP62952 87 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 BASP1P80723 227 aaKnown RBP-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 HAMPP81172 84 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 LTC4SQ16873 150 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 UBE2DNLQ8IWF7 75 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 DEFB104AQ8WTQ1 72 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 CEP19Q96LK0 163 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 CARD19Q96LW7 228 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 Q96NJ1 140 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 CYP4F30PQ9H0H9 118 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 SH3BGRL3Q9H299 93 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 LRTM1Q9HBL6 345 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 TMEM242Q9NWH2 141 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 MYH2Q9UKX2 1941 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 NHSL1Q5SYE7 1610 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 PTPN23Q9H3S7 1636 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 ALKQ9UM73 1620 aa-0.47□□□□□ -2.48
PDGFC-208ENST00000512711 KIDINS220Q9ULH0 1771 aa-0.47□□□□□ -2.49
PDGFC-208ENST00000512711 TROQ12816 1431 aaPredicted RBP-0.47□□□□□ -2.49
PDGFC-208ENST00000512711 CASKIN1Q8WXD9 1431 aa-0.47□□□□□ -2.49
PDGFC-208ENST00000512711 PLB1Q6P1J6 1458 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 IGHV1-24A0A0C4DH33 117 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 LINC00959A0A1B0GUT2 108 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 TCRBV3S1A0A5B6 114 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 FAM92AA1XBS5 289 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 RBAKDNA6NC62 111 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 TMEM210A6NLX4 147 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 LOC730098B7Z3J9 87 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 H3BNG1 76 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 GABARAPH6UMI1 98 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 ACYP2P14621 99 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 CKS2P33552 79 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 SDC2P34741 201 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 REEP5Q00765 189 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 MYO7BQ6PIF6 2116 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 Q6ZRX8 168 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 LINC00305Q7Z4B0 112 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 Q8IZM0 81 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 NUP35Q8NFH5 326 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 OR13C6PQ8NH95 151 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 DYDC1Q8WWB3 177 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 AP3S1Q92572 193 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 LINC01600Q96MT4 127 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 TTTY10Q9BZA0 68 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 MARF1Q9Y4F3 1742 aaKnown RBP-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 ZNF236Q9UL36 1845 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 FAM135BQ49AJ0 1406 aa-0.48□□□□□ -2.49
PDGFC-208ENST00000512711 ADGRB1O14514 1584 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 BICRAQ9NZM4 1560 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 LRP6O75581 1613 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 PRDM2Q13029 1718 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 SIPA1L3O60292 1781 aaPredicted RBP-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 UBR3Q6ZT12 1888 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 ANKRD31Q8N7Z5 1873 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 A0A087WTM6 91 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 TRBV7-1A0A0A6YYK4 115 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 TRAV13-1A0A0B4J241 112 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 A0A0D9SFI3 127 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 TRDV1A0A1B0GX56 115 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 PIN1P1O15428 100 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 MFSD11O43934 449 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 IFNA21P01568 189 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 S100A6P06703 90 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 ADCYAP1P18509 176 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 CRYBA4P53673 196 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 ERVS71-1P61550 626 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 RPL19P84098 196 aaKnown RBP-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 RGS21Q2M5E4 152 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 FAM74A4Q5TZK3 123 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 SPAG11AQ6PDA7 123 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 CYP2G1PQ6ZSU1 146 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 C4orf33Q8N1A6 199 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 OR51A4Q8NGJ6 313 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 GINS3Q9BRX5 216 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 LAMTOR3Q9UHA4 124 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms