RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 RPL36ALQ969Q0 106 aaKnown RBP4.73□□□□□ -1.65
USP46-208ENST00000512656 ZC2HC1AQ96GY0 325 aa4.73□□□□□ -1.65
USP46-208ENST00000512656 SFRP2Q96HF1 295 aa4.73□□□□□ -1.65
USP46-208ENST00000512656 SAMD10Q9BYL1 202 aa4.73□□□□□ -1.65
USP46-208ENST00000512656 JPT2Q9H910 190 aa4.73□□□□□ -1.65
USP46-208ENST00000512656 BATF3Q9NR55 127 aa4.73□□□□□ -1.65
USP46-208ENST00000512656 KLK12Q9UKR0 248 aa4.73□□□□□ -1.65
USP46-208ENST00000512656 A0A087WWL8 130 aa4.72□□□□□ -1.65
USP46-208ENST00000512656 FXYD6-FXYD2A0A087WZ82 144 aa4.72□□□□□ -1.65
USP46-208ENST00000512656 TRBV6-1A0A0K0K1D8 114 aa4.72□□□□□ -1.65
USP46-208ENST00000512656 GRIFINA4D1Z8 144 aa4.72□□□□□ -1.65
USP46-208ENST00000512656 MAP1LC3B2A6NCE7 125 aa4.72□□□□□ -1.65
USP46-208ENST00000512656 RNF222A6NCQ9 220 aa4.72□□□□□ -1.65
USP46-208ENST00000512656 FAM74A7A6NL05 159 aa4.72□□□□□ -1.65
USP46-208ENST00000512656 M0R381 172 aa4.72□□□□□ -1.65
USP46-208ENST00000512656 FHITP49789 147 aa4.72□□□□□ -1.65
USP46-208ENST00000512656 CRIP1P50238 77 aa4.72□□□□□ -1.65
USP46-208ENST00000512656 PKIAP61925 76 aa4.72□□□□□ -1.65
USP46-208ENST00000512656 ZNF726P1Q15940 193 aa4.72□□□□□ -1.65
USP46-208ENST00000512656 UBE2WQ96B02 151 aa4.72□□□□□ -1.65
USP46-208ENST00000512656 MAP1LC3BQ9GZQ8 125 aa4.72□□□□□ -1.65
USP46-208ENST00000512656 TRBV7-3A0A075B6L6 115 aa4.71□□□□□ -1.66
USP46-208ENST00000512656 TMEM262E9PQX1 116 aa4.71□□□□□ -1.66
USP46-208ENST00000512656 F5H697 171 aa4.71□□□□□ -1.66
USP46-208ENST00000512656 CRPP02741 224 aa4.71□□□□□ -1.66
USP46-208ENST00000512656 S100A9P06702 114 aaKnown RBP4.71□□□□□ -1.66
USP46-208ENST00000512656 AKR1C3P42330 323 aa4.71□□□□□ -1.66
USP46-208ENST00000512656 ZNF674Q2M3X9 581 aa4.71□□□□□ -1.66
USP46-208ENST00000512656 Q5BKY6 102 aa4.71□□□□□ -1.66
USP46-208ENST00000512656 CST9LP1Q5W188 147 aa4.71□□□□□ -1.66
USP46-208ENST00000512656 CHAC1Q9BUX1 264 aa4.71□□□□□ -1.66
USP46-208ENST00000512656 Q9UF83 564 aa4.71□□□□□ -1.66
USP46-208ENST00000512656 TMSB15BA0A087X1C1 80 aa4.7□□□□□ -1.66
USP46-208ENST00000512656 LTAP01374 205 aa4.7□□□□□ -1.66
USP46-208ENST00000512656 MALP21145 153 aa4.7□□□□□ -1.66
USP46-208ENST00000512656 RAB4BP61018 213 aa4.7□□□□□ -1.66
USP46-208ENST00000512656 UBE2D3P61077 147 aa4.7□□□□□ -1.66
USP46-208ENST00000512656 UBE2D2P62837 147 aa4.7□□□□□ -1.66
USP46-208ENST00000512656 TMEM97Q5BJF2 176 aa4.7□□□□□ -1.66
USP46-208ENST00000512656 ATRAIDQ6UW56 229 aa4.7□□□□□ -1.66
USP46-208ENST00000512656 SCXQ7RTU7 201 aa4.7□□□□□ -1.66
USP46-208ENST00000512656 OR10G8Q8NGN5 311 aa4.7□□□□□ -1.66
USP46-208ENST00000512656 C1orf43Q9BWL3 253 aa4.7□□□□□ -1.66
USP46-208ENST00000512656 ZNF471Q9BX82 626 aaPredicted RBP4.7□□□□□ -1.66
USP46-208ENST00000512656 TRBV6-8A0A0A6YYG3 113 aa4.69□□□□□ -1.66
USP46-208ENST00000512656 PFDN1O60925 122 aa4.69□□□□□ -1.66
USP46-208ENST00000512656 CXCL1P09341 107 aa4.69□□□□□ -1.66
USP46-208ENST00000512656 ZNF56Q15929 161 aa4.69□□□□□ -1.66
USP46-208ENST00000512656 LINC01620Q4KN68 170 aa4.69□□□□□ -1.66
USP46-208ENST00000512656 C15orf54Q8N8G6 183 aa4.69□□□□□ -1.66
USP46-208ENST00000512656 CHCHD5Q9BSY4 110 aa4.69□□□□□ -1.66
USP46-208ENST00000512656 UMAD1C9J7I0 102 aa4.68□□□□□ -1.66
USP46-208ENST00000512656 ARPC5O15511 151 aa4.68□□□□□ -1.66
USP46-208ENST00000512656 PAGE4O60829 102 aa4.68□□□□□ -1.66
USP46-208ENST00000512656 OXTP01178 125 aa4.68□□□□□ -1.66
USP46-208ENST00000512656 IGLV2-8P01709 118 aa4.68□□□□□ -1.66
USP46-208ENST00000512656 ANGP03950 147 aaKnown RBP4.68□□□□□ -1.66
USP46-208ENST00000512656 SMIM17P0DL12 118 aa4.68□□□□□ -1.66
USP46-208ENST00000512656 MIAQ16674 131 aa4.68□□□□□ -1.66
USP46-208ENST00000512656 SERTAD4-AS1Q5TG53 156 aa4.68□□□□□ -1.66
USP46-208ENST00000512656 SPANXN1Q5VSR9 72 aa4.68□□□□□ -1.66
USP46-208ENST00000512656 SFT2D1Q8WV19 159 aa4.68□□□□□ -1.66
USP46-208ENST00000512656 DNAJC30Q96LL9 226 aa4.68□□□□□ -1.66
USP46-208ENST00000512656 SNAI2O43623 268 aa4.67□□□□□ -1.66
USP46-208ENST00000512656 OR5AL1P0C617 328 aa4.67□□□□□ -1.66
USP46-208ENST00000512656 DGAT2L7PQ6IED9 249 aa4.67□□□□□ -1.66
USP46-208ENST00000512656 PRR27Q6MZM9 219 aa4.67□□□□□ -1.66
USP46-208ENST00000512656 ENHOQ6UWT2 76 aa4.67□□□□□ -1.66
USP46-208ENST00000512656 BAGE2Q86Y30 109 aa4.67□□□□□ -1.66
USP46-208ENST00000512656 NEXN-AS1Q8NBZ9 246 aa4.67□□□□□ -1.66
USP46-208ENST00000512656 OR10AG1Q8NH19 301 aa4.67□□□□□ -1.66
USP46-208ENST00000512656 FAM213BQ8TBF2 198 aa4.67□□□□□ -1.66
USP46-208ENST00000512656 CIRBP-AS1Q8TBR5 109 aa4.67□□□□□ -1.66
USP46-208ENST00000512656 CYTL1Q9NRR1 136 aa4.67□□□□□ -1.66
USP46-208ENST00000512656 USP17L23D6RBM5 183 aa4.66□□□□□ -1.66
USP46-208ENST00000512656 HLA-DQA1P01909 254 aa4.66□□□□□ -1.66
USP46-208ENST00000512656 EIF5AP63241 154 aaKnown RBP4.66□□□□□ -1.66
USP46-208ENST00000512656 RPL19P84098 196 aaKnown RBP4.66□□□□□ -1.66
USP46-208ENST00000512656 ZNF345Q14585 488 aa4.66□□□□□ -1.66
USP46-208ENST00000512656 RGS21Q2M5E4 152 aa4.66□□□□□ -1.66
USP46-208ENST00000512656 MPV17L2Q567V2 206 aa4.66□□□□□ -1.66
USP46-208ENST00000512656 KCNRGQ8N5I3 272 aa4.66□□□□□ -1.66
USP46-208ENST00000512656 MBD3L1Q8WWY6 194 aa4.66□□□□□ -1.66
USP46-208ENST00000512656 AP1S3Q96PC3 154 aa4.66□□□□□ -1.66
USP46-208ENST00000512656 VAX2Q9UIW0 290 aa4.66□□□□□ -1.66
USP46-208ENST00000512656 TRBV25-1A0A075B6N4 114 aa4.65□□□□□ -1.67
USP46-208ENST00000512656 IGHV1-24A0A0C4DH33 117 aa4.65□□□□□ -1.67
USP46-208ENST00000512656 A0A0D9SG52 128 aa4.65□□□□□ -1.67
USP46-208ENST00000512656 H7C1H1 209 aa4.65□□□□□ -1.67
USP46-208ENST00000512656 RPL37AP61513 92 aaKnown RBP4.65□□□□□ -1.67
USP46-208ENST00000512656 TMUB2Q71RG4 321 aa4.65□□□□□ -1.67
USP46-208ENST00000512656 DERL1Q9BUN8 251 aa4.65□□□□□ -1.67
USP46-208ENST00000512656 PRR34Q9NV39 138 aa4.65□□□□□ -1.67
USP46-208ENST00000512656 MUC21A0A0G2JKD1 596 aa4.64□□□□□ -1.67
USP46-208ENST00000512656 MUC21A0A140T8X8 626 aa4.64□□□□□ -1.67
USP46-208ENST00000512656 A0A1B0GV50 99 aa4.64□□□□□ -1.67
USP46-208ENST00000512656 KANTRA0A1W2PQU2 76 aa4.64□□□□□ -1.67
USP46-208ENST00000512656 XKRY2A2RUG3 117 aa4.64□□□□□ -1.67
USP46-208ENST00000512656 HMSDA8MTL9 139 aa4.64□□□□□ -1.67
USP46-208ENST00000512656 G3V3Q6 166 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms