RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 U3KQA8 63 aa6.72□□□□□ -1.33
VCAN-208ENST00000512590 DOCK6Q96HP0 2047 aa6.72□□□□□ -1.33
VCAN-208ENST00000512590 C9orf118A6NHY6 69 aa6.72□□□□□ -1.33
VCAN-208ENST00000512590 WISP3O95389 354 aaPredicted RBP6.72□□□□□ -1.33
VCAN-208ENST00000512590 BRI3O95415 125 aa6.72□□□□□ -1.33
VCAN-208ENST00000512590 SPANXB1Q9NS25 103 aaPredicted RBP6.72□□□□□ -1.33
VCAN-208ENST00000512590 POLEQ07864 2286 aa6.72□□□□□ -1.33
VCAN-208ENST00000512590 KIF13BQ9NQT8 1826 aa6.71□□□□□ -1.33
VCAN-208ENST00000512590 IGLC7A0M8Q6 106 aa6.71□□□□□ -1.33
VCAN-208ENST00000512590 Q6ZUT4 128 aa6.71□□□□□ -1.33
VCAN-208ENST00000512590 A0A1B0GXF2 115 aa6.71□□□□□ -1.34
VCAN-208ENST00000512590 C12orf74Q32Q52 190 aa6.71□□□□□ -1.34
VCAN-208ENST00000512590 FOXL2NBQ6ZUU3 175 aa6.71□□□□□ -1.34
VCAN-208ENST00000512590 C15orf65H3BRN8 121 aa6.71□□□□□ -1.34
VCAN-208ENST00000512590 Q6ZS49 121 aa6.71□□□□□ -1.34
VCAN-208ENST00000512590 ARFGEF1Q9Y6D6 1849 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 HIST1H2BKO60814 126 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 HIST1H2BJP06899 126 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 HIST1H2BOP23527 126 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 HIST1H2BBP33778 126 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 HIST1H2BDP58876 126 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 HIST1H2BCP62807 126 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 PRLHP81277 87 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 HIST2H2BEQ16778 126 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.7□□□□□ -1.34
VCAN-208ENST00000512590 HIST1H2BHQ93079 126 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 HIST1H2BNQ99877 126 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 HIST1H2BMQ99879 126 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 TMEM223A0PJW6 202 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 TRBV6-8A0A0A6YYG3 113 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 hDV103S1A0JD37 113 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 SPACA4Q8TDM5 124 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 CREBBPQ92793 2442 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 IGFL2Q6UWQ7 119 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 ZNF581Q9P0T4 197 aa6.7□□□□□ -1.34
VCAN-208ENST00000512590 TEN1Q86WV5 123 aa6.69□□□□□ -1.34
VCAN-208ENST00000512590 C18orf32Q8TCD1 76 aa6.69□□□□□ -1.34
VCAN-208ENST00000512590 ZNF236Q9UL36 1845 aa6.69□□□□□ -1.34
VCAN-208ENST00000512590 DOCK10Q96BY6 2186 aa6.69□□□□□ -1.34
VCAN-208ENST00000512590 PIKFYVEQ9Y2I7 2098 aa6.69□□□□□ -1.34
VCAN-208ENST00000512590 DOCK7Q96N67 2140 aa6.69□□□□□ -1.34
VCAN-208ENST00000512590 ARID1AO14497 2285 aa6.69□□□□□ -1.34
VCAN-208ENST00000512590 GOLGB1Q14789 3259 aaKnown RBP6.69□□□□□ -1.34
VCAN-208ENST00000512590 DEFB1P60022 68 aa6.69□□□□□ -1.34
VCAN-208ENST00000512590 CLEC2BQ92478 149 aa6.69□□□□□ -1.34
VCAN-208ENST00000512590 FAM30AQ9NZY2 134 aa6.69□□□□□ -1.34
VCAN-208ENST00000512590 C20orf197Q8N268 126 aa6.69□□□□□ -1.34
VCAN-208ENST00000512590 LINC00526Q96FQ7 95 aa6.69□□□□□ -1.34
VCAN-208ENST00000512590 TRBV7-6A0A0J9YX20 115 aa6.69□□□□□ -1.34
VCAN-208ENST00000512590 ATP11AUNQ6ZP68 121 aa6.68□□□□□ -1.34
VCAN-208ENST00000512590 LY75O60449 1722 aa6.68□□□□□ -1.34
VCAN-208ENST00000512590 HEATR1Q9H583 2144 aaKnown RBP6.68□□□□□ -1.34
VCAN-208ENST00000512590 A0A0J9YXY3 114 aa6.68□□□□□ -1.34
VCAN-208ENST00000512590 TIMM17BO60830 172 aa6.68□□□□□ -1.34
VCAN-208ENST00000512590 UNQ9165/PRO28630Q6UXU0 137 aa6.68□□□□□ -1.34
VCAN-208ENST00000512590 LRRC37AA6NMS7 1700 aa6.68□□□□□ -1.34
VCAN-208ENST00000512590 IGLV3-1P01715 115 aa6.68□□□□□ -1.34
VCAN-208ENST00000512590 CKAP5Q14008 2032 aa6.68□□□□□ -1.34
VCAN-208ENST00000512590 I3L2K1 104 aa6.68□□□□□ -1.34
VCAN-208ENST00000512590 CXCL1P09341 107 aa6.68□□□□□ -1.34
VCAN-208ENST00000512590 Q8N7P7 452 aa6.68□□□□□ -1.34
VCAN-208ENST00000512590 NDUFA7O95182 113 aa6.68□□□□□ -1.34
VCAN-208ENST00000512590 KIAA0087Q14695 138 aa6.68□□□□□ -1.34
VCAN-208ENST00000512590 CEMP1Q6PRD7 247 aaPredicted RBP6.68□□□□□ -1.34
VCAN-208ENST00000512590 COL4A1P02462 1669 aa6.67□□□□□ -1.34
VCAN-208ENST00000512590 C6orf223Q8N319 242 aa6.67□□□□□ -1.34
VCAN-208ENST00000512590 WWC2-AS2Q96NR7 200 aa6.67□□□□□ -1.34
VCAN-208ENST00000512590 COX8AP10176 69 aa6.67□□□□□ -1.34
VCAN-208ENST00000512590 NACAE9PAV3 2078 aa6.67□□□□□ -1.34
VCAN-208ENST00000512590 TRBV6-4A0A1B0GX49 114 aa6.67□□□□□ -1.34
VCAN-208ENST00000512590 CYYR1Q96J86 154 aa6.67□□□□□ -1.34
VCAN-208ENST00000512590 IGKV2D-30A0A075B6S6 120 aa6.67□□□□□ -1.34
VCAN-208ENST00000512590 IGKV2-30P06310 120 aa6.67□□□□□ -1.34
VCAN-208ENST00000512590 SRSF3P84103 164 aaKnown RBP6.67□□□□□ -1.34
VCAN-208ENST00000512590 C7orf65Q6ZTY9 151 aa6.66□□□□□ -1.34
VCAN-208ENST00000512590 RITA1Q96K30 269 aa6.66□□□□□ -1.34
VCAN-208ENST00000512590 A0A0G2JMZ2 1700 aa6.66□□□□□ -1.34
VCAN-208ENST00000512590 ZNF503-AS2A6NEH8 195 aa6.66□□□□□ -1.34
VCAN-208ENST00000512590 K7EIM0 57 aa6.66□□□□□ -1.34
VCAN-208ENST00000512590 FBXL19-AS1Q494R0 122 aa6.66□□□□□ -1.34
VCAN-208ENST00000512590 A0A1W2PPM0 123 aa6.66□□□□□ -1.34
VCAN-208ENST00000512590 SPRNQ5BIV9 151 aa6.66□□□□□ -1.34
VCAN-208ENST00000512590 ZFAND3Q9H8U3 227 aa6.66□□□□□ -1.34
VCAN-208ENST00000512590 FAM240AA0A1B0GVK7 77 aa6.65□□□□□ -1.34
VCAN-208ENST00000512590 K7EP34 96 aa6.65□□□□□ -1.34
VCAN-208ENST00000512590 ZNF747Q9BV97 191 aa6.65□□□□□ -1.34
VCAN-208ENST00000512590 CD164L2Q6UWJ8 174 aa6.65□□□□□ -1.34
VCAN-208ENST00000512590 PRAC2D3DTV9 90 aa6.65□□□□□ -1.35
VCAN-208ENST00000512590 UBE2V1Q13404 147 aa6.65□□□□□ -1.35
VCAN-208ENST00000512590 CDIP1Q9H305 208 aa6.65□□□□□ -1.35
VCAN-208ENST00000512590 TP53TG3Q9ULZ0 132 aa6.65□□□□□ -1.35
VCAN-208ENST00000512590 ALPK2Q86TB3 2170 aa6.64□□□□□ -1.35
VCAN-208ENST00000512590 USF3Q68DE3 2245 aa6.64□□□□□ -1.35
VCAN-208ENST00000512590 WFDC10AQ9H1F0 79 aa6.64□□□□□ -1.35
VCAN-208ENST00000512590 C11orf86A6NJI1 115 aa6.64□□□□□ -1.35
VCAN-208ENST00000512590 CDPF1Q6NVV7 123 aa6.64□□□□□ -1.35
VCAN-208ENST00000512590 ABCA1O95477 2261 aa6.64□□□□□ -1.35
VCAN-208ENST00000512590 P0C879 139 aa6.64□□□□□ -1.35
VCAN-208ENST00000512590 HIST3H2BBQ8N257 126 aa6.64□□□□□ -1.35
VCAN-208ENST00000512590 TOMM6Q96B49 74 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms