RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 ZNRF2Q8NHG8 242 aa6.78□□□□□ -1.32
CPNE4-210ENST00000512332 BBC3Q96PG8 261 aaPredicted RBP6.78□□□□□ -1.32
CPNE4-210ENST00000512332 SPANXB1Q9NS25 103 aaPredicted RBP6.78□□□□□ -1.32
CPNE4-210ENST00000512332 A0A0J9YY99 117 aa6.78□□□□□ -1.32
CPNE4-210ENST00000512332 A8MWV9 139 aa6.78□□□□□ -1.32
CPNE4-210ENST00000512332 UBE2D1P51668 147 aa6.78□□□□□ -1.32
CPNE4-210ENST00000512332 KRTAP10-9P60411 292 aa6.78□□□□□ -1.32
CPNE4-210ENST00000512332 TEX29Q8N6K0 151 aa6.78□□□□□ -1.32
CPNE4-210ENST00000512332 CLUHP3Q96NS8 147 aa6.78□□□□□ -1.32
CPNE4-210ENST00000512332 PYGO1Q9Y3Y4 419 aa6.78□□□□□ -1.32
CPNE4-210ENST00000512332 CREBBPQ92793 2442 aa6.78□□□□□ -1.32
CPNE4-210ENST00000512332 KNCNA6PVL3 124 aa6.77□□□□□ -1.33
CPNE4-210ENST00000512332 SAP30O75446 220 aa6.77□□□□□ -1.33
CPNE4-210ENST00000512332 KLHL30-AS1Q8NEE0 82 aa6.77□□□□□ -1.33
CPNE4-210ENST00000512332 PLEKHB2Q96CS7 222 aa6.77□□□□□ -1.33
CPNE4-210ENST00000512332 SORL1Q92673 2214 aa6.77□□□□□ -1.33
CPNE4-210ENST00000512332 CRYBG3Q68DQ2 2970 aa6.77□□□□□ -1.33
CPNE4-210ENST00000512332 FAM208BQ5VWN6 2430 aa6.77□□□□□ -1.33
CPNE4-210ENST00000512332 FBN2P35556 2912 aa6.77□□□□□ -1.33
CPNE4-210ENST00000512332 M0R2P5 195 aa6.77□□□□□ -1.33
CPNE4-210ENST00000512332 SRSF9Q13242 221 aaKnown RBP eCLIP6.77□□□□□ -1.33
CPNE4-210ENST00000512332 TMEM170BQ5T4T1 132 aa6.77□□□□□ -1.33
CPNE4-210ENST00000512332 C18orf65Q6ZTR6 163 aa6.77□□□□□ -1.33
CPNE4-210ENST00000512332 TMEM61Q8N0U2 210 aa6.77□□□□□ -1.33
CPNE4-210ENST00000512332 SLC25A29Q8N8R3 303 aa6.77□□□□□ -1.33
CPNE4-210ENST00000512332 DLX4Q92988 240 aaPredicted RBP6.77□□□□□ -1.33
CPNE4-210ENST00000512332 ZNF462Q96JM2 2506 aa6.76□□□□□ -1.33
CPNE4-210ENST00000512332 DEFB136Q30KP8 78 aa6.76□□□□□ -1.33
CPNE4-210ENST00000512332 AMELXQ99217 191 aa6.76□□□□□ -1.33
CPNE4-210ENST00000512332 PTPN13Q12923 2485 aa6.76□□□□□ -1.33
CPNE4-210ENST00000512332 TMEM223A0PJW6 202 aa6.76□□□□□ -1.33
CPNE4-210ENST00000512332 RBMY1BA6NDE4 496 aaKnown RBP6.76□□□□□ -1.33
CPNE4-210ENST00000512332 RBMY1EA6NEQ0 496 aaKnown RBP6.76□□□□□ -1.33
CPNE4-210ENST00000512332 J3QQQ9 107 aa6.76□□□□□ -1.33
CPNE4-210ENST00000512332 RBMY1DP0C7P1 496 aaKnown RBP6.76□□□□□ -1.33
CPNE4-210ENST00000512332 EMP1P54849 157 aa6.76□□□□□ -1.33
CPNE4-210ENST00000512332 ZNF415Q09FC8 603 aa6.76□□□□□ -1.33
CPNE4-210ENST00000512332 DEFB114Q30KQ6 69 aa6.76□□□□□ -1.33
CPNE4-210ENST00000512332 Q96MF0 132 aa6.76□□□□□ -1.33
CPNE4-210ENST00000512332 VCX2Q9H322 139 aa6.76□□□□□ -1.33
CPNE4-210ENST00000512332 UTP20O75691 2785 aaKnown RBP6.76□□□□□ -1.33
CPNE4-210ENST00000512332 LRRK2Q5S007 2527 aa6.75□□□□□ -1.33
CPNE4-210ENST00000512332 UBR5O95071 2799 aaPredicted RBP6.75□□□□□ -1.33
CPNE4-210ENST00000512332 IGLV4-3A0A075B6K6 122 aa6.75□□□□□ -1.33
CPNE4-210ENST00000512332 LEPROTO15243 131 aa6.75□□□□□ -1.33
CPNE4-210ENST00000512332 KRTAP1-3Q8IUG1 177 aa6.75□□□□□ -1.33
CPNE4-210ENST00000512332 SPXQ9BT56 116 aa6.75□□□□□ -1.33
CPNE4-210ENST00000512332 ZANQ9Y493 2812 aa6.75□□□□□ -1.33
CPNE4-210ENST00000512332 POLQO75417 2590 aa6.75□□□□□ -1.33
CPNE4-210ENST00000512332 USP24Q9UPU5 2620 aa6.75□□□□□ -1.33
CPNE4-210ENST00000512332 NAV2Q8IVL1 2488 aa6.75□□□□□ -1.33
CPNE4-210ENST00000512332 TRAV25A0A0B4J276 109 aa6.74□□□□□ -1.33
CPNE4-210ENST00000512332 RHODO00212 210 aa6.74□□□□□ -1.33
CPNE4-210ENST00000512332 TSPEAR-AS2P59090 65 aa6.74□□□□□ -1.33
CPNE4-210ENST00000512332 BEAN1Q3B7T3 259 aa6.74□□□□□ -1.33
CPNE4-210ENST00000512332 DEFB104AQ8WTQ1 72 aa6.74□□□□□ -1.33
CPNE4-210ENST00000512332 DUX3Q96PT4 197 aa6.74□□□□□ -1.33
CPNE4-210ENST00000512332 MAP6D1Q9H9H5 199 aa6.74□□□□□ -1.33
CPNE4-210ENST00000512332 IGHV3-30P01768 117 aa6.74□□□□□ -1.33
CPNE4-210ENST00000512332 IGHV3-30-5P0DP03 117 aa6.74□□□□□ -1.33
CPNE4-210ENST00000512332 ZNF22P17026 224 aaPredicted RBP6.74□□□□□ -1.33
CPNE4-210ENST00000512332 LGALS3P17931 250 aaKnown RBP6.74□□□□□ -1.33
CPNE4-210ENST00000512332 C11orf72Q8NBR9 251 aa6.74□□□□□ -1.33
CPNE4-210ENST00000512332 DYNLRB2Q8TF09 96 aa6.74□□□□□ -1.33
CPNE4-210ENST00000512332 RAX2Q96IS3 184 aa6.74□□□□□ -1.33
CPNE4-210ENST00000512332 DNAJC30Q96LL9 226 aa6.74□□□□□ -1.33
CPNE4-210ENST00000512332 OPRPNQ99935 248 aaPredicted RBP6.74□□□□□ -1.33
CPNE4-210ENST00000512332 PGPEP1Q9NXJ5 209 aa6.74□□□□□ -1.33
CPNE4-210ENST00000512332 TNFRSF18Q9Y5U5 241 aa6.74□□□□□ -1.33
CPNE4-210ENST00000512332 MXRA5Q9NR99 2828 aa6.74□□□□□ -1.33
CPNE4-210ENST00000512332 H3BMG7 143 aa6.73□□□□□ -1.33
CPNE4-210ENST00000512332 XP32Q5T750 250 aa6.73□□□□□ -1.33
CPNE4-210ENST00000512332 MRPL16Q9NX20 251 aaKnown RBP6.73□□□□□ -1.33
CPNE4-210ENST00000512332 PRO0461Q9UI25 63 aa6.73□□□□□ -1.33
CPNE4-210ENST00000512332 HTN1P15515 57 aa6.73□□□□□ -1.33
CPNE4-210ENST00000512332 MRPS36P82909 103 aaKnown RBP6.73□□□□□ -1.33
CPNE4-210ENST00000512332 GAGE13Q4V321 117 aa6.73□□□□□ -1.33
CPNE4-210ENST00000512332 CFAP126Q5VTH2 177 aa6.73□□□□□ -1.33
CPNE4-210ENST00000512332 NDUFA11Q86Y39 141 aa6.73□□□□□ -1.33
CPNE4-210ENST00000512332 FAM104AQ969W3 186 aa6.73□□□□□ -1.33
CPNE4-210ENST00000512332 CSMD2Q7Z408 3487 aa6.73□□□□□ -1.33
CPNE4-210ENST00000512332 INSP01308 110 aa6.72□□□□□ -1.33
CPNE4-210ENST00000512332 IGHV3-53P01767 116 aa6.72□□□□□ -1.33
CPNE4-210ENST00000512332 UBE2D3P61077 147 aa6.72□□□□□ -1.33
CPNE4-210ENST00000512332 UBE2D2P62837 147 aa6.72□□□□□ -1.33
CPNE4-210ENST00000512332 RPL24P83731 157 aaKnown RBP6.72□□□□□ -1.33
CPNE4-210ENST00000512332 WFDC2Q14508 124 aa6.72□□□□□ -1.33
CPNE4-210ENST00000512332 LYRM7Q5U5X0 104 aa6.72□□□□□ -1.33
CPNE4-210ENST00000512332 Q6ZSV7 163 aa6.72□□□□□ -1.33
CPNE4-210ENST00000512332 SPANXA1Q9NS26 97 aa6.72□□□□□ -1.33
CPNE4-210ENST00000512332 ZFYVE26Q68DK2 2539 aa6.72□□□□□ -1.33
CPNE4-210ENST00000512332 A0A0J9YXV3 536 aa6.72□□□□□ -1.33
CPNE4-210ENST00000512332 TEX48A0A1B0GUV7 120 aa6.72□□□□□ -1.33
CPNE4-210ENST00000512332 PROK1P58294 105 aa6.72□□□□□ -1.33
CPNE4-210ENST00000512332 FHL3Q13643 280 aa6.72□□□□□ -1.33
CPNE4-210ENST00000512332 LINC01587Q99440 93 aa6.72□□□□□ -1.33
CPNE4-210ENST00000512332 J3QR89 54 aa6.71□□□□□ -1.34
CPNE4-210ENST00000512332 RS1O15537 224 aa6.71□□□□□ -1.34
CPNE4-210ENST00000512332 TSPAN13O95857 204 aa6.71□□□□□ -1.34
CPNE4-210ENST00000512332 CD28P10747 220 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms