RNA–Protein interactions for RNA: ENST00000511129.2

SCARB2-205, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-205ENST00000511129 ZNF90Q03938 601 aa3.49□□□□□ -1.85
SCARB2-205ENST00000511129 HES1Q14469 280 aa3.49□□□□□ -1.85
SCARB2-205ENST00000511129 TMEM155Q4W5P6 130 aa3.49□□□□□ -1.85
SCARB2-205ENST00000511129 Q56UQ5 140 aa3.49□□□□□ -1.85
SCARB2-205ENST00000511129 CAMK2N1Q7Z7J9 78 aa3.49□□□□□ -1.85
SCARB2-205ENST00000511129 OR5AS1Q8N127 324 aa3.49□□□□□ -1.85
SCARB2-205ENST00000511129 COPS9Q8WXC6 57 aa3.49□□□□□ -1.85
SCARB2-205ENST00000511129 ZC2HC1AQ96GY0 325 aa3.49□□□□□ -1.85
SCARB2-205ENST00000511129 AGPAT4-IT1Q9H0P7 198 aa3.49□□□□□ -1.85
SCARB2-205ENST00000511129 TMEM106BQ9NUM4 274 aa3.49□□□□□ -1.85
SCARB2-205ENST00000511129 ZNF586Q9NXT0 402 aa3.49□□□□□ -1.85
SCARB2-205ENST00000511129 DHRS4-AS1Q9P1J3 65 aa3.49□□□□□ -1.85
SCARB2-205ENST00000511129 TP73-AS1Q9UF72 201 aa3.49□□□□□ -1.85
SCARB2-205ENST00000511129 ZNF835Q9Y2P0 537 aa3.49□□□□□ -1.85
SCARB2-205ENST00000511129 CHCHD2Q9Y6H1 151 aaPredicted RBP3.49□□□□□ -1.85
SCARB2-205ENST00000511129 CSPG4Q6UVK1 2322 aa3.49□□□□□ -1.85
SCARB2-205ENST00000511129 NIPBLQ6KC79 2804 aaeCLIP3.48□□□□□ -1.85
SCARB2-205ENST00000511129 BUB1B-PAK6H3BSN5 160 aa3.48□□□□□ -1.85
SCARB2-205ENST00000511129 SDCBPO00560 298 aaPredicted RBP3.48□□□□□ -1.85
SCARB2-205ENST00000511129 NMUP48645 174 aa3.48□□□□□ -1.85
SCARB2-205ENST00000511129 TAS2R45P59539 299 aa3.48□□□□□ -1.85
SCARB2-205ENST00000511129 YPEL3P61236 119 aaPredicted RBP3.48□□□□□ -1.85
SCARB2-205ENST00000511129 SERF2P84101 59 aa3.48□□□□□ -1.85
SCARB2-205ENST00000511129 TFF3Q07654 80 aa3.48□□□□□ -1.85
SCARB2-205ENST00000511129 EBI3Q14213 229 aa3.48□□□□□ -1.85
SCARB2-205ENST00000511129 CEMP1Q6PRD7 247 aaPredicted RBP3.48□□□□□ -1.85
SCARB2-205ENST00000511129 LYZL2Q7Z4W2 148 aa3.48□□□□□ -1.85
SCARB2-205ENST00000511129 SAXO1Q8IYX7 474 aa3.48□□□□□ -1.85
SCARB2-205ENST00000511129 OR4B1Q8NGF8 309 aa3.48□□□□□ -1.85
SCARB2-205ENST00000511129 BRK1Q8WUW1 75 aa3.48□□□□□ -1.85
SCARB2-205ENST00000511129 ITLN2Q8WWU7 325 aaPredicted RBP3.48□□□□□ -1.85
SCARB2-205ENST00000511129 ARHGAP5-AS1Q96IT6 56 aa3.48□□□□□ -1.85
SCARB2-205ENST00000511129 BET1LQ9NYM9 111 aa3.48□□□□□ -1.85
SCARB2-205ENST00000511129 FAM215AQ9Y5M1 114 aa3.48□□□□□ -1.85
SCARB2-205ENST00000511129 TANC2Q9HCD6 1990 aa3.48□□□□□ -1.85
SCARB2-205ENST00000511129 FN1P02751 2386 aaKnown RBP3.48□□□□□ -1.85
SCARB2-205ENST00000511129 USF3Q68DE3 2245 aa3.48□□□□□ -1.85
SCARB2-205ENST00000511129 A0A1W2PQD3 144 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 TCRAP04437 139 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 SLC25A6P12236 298 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 DYNLT3P51808 116 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 ATP5G2Q06055 141 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 Q0VG73 95 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 NNATQ16517 81 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 LGALS9BQ3B8N2 356 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 LINC01554Q52M75 96 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 CD177Q8N6Q3 437 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 ZNF645Q8N7E2 425 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 OR10P1Q8NGE3 313 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 OR4X2Q8NGF9 303 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 B9D2Q9BPU9 175 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 CHAC1Q9BUX1 264 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 VAMP8Q9BV40 100 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 DEFB126Q9BYW3 111 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 TTTY12Q9BZ98 90 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 GNG13Q9P2W3 67 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 UQCR10Q9UDW1 63 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 TIMM9Q9Y5J7 89 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 TRAPPC1Q9Y5R8 145 aa3.47□□□□□ -1.85
SCARB2-205ENST00000511129 JMJD1CQ15652 2540 aa3.46□□□□□ -1.85
SCARB2-205ENST00000511129 DSCAMO60469 2012 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 RTTNQ86VV8 2226 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 IGLV1-50A0A075B6I6 118 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 C3orf85A0A1B0GTC6 90 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 A0A1W2PPR1 153 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 M0R2P5 195 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 ZNF737O75373 536 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 SERF1AO75920 110 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 IGLV2-23P01705 113 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 IGLV3-1P01715 115 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 SLC25A5P05141 298 aaKnown RBP3.46□□□□□ -1.86
SCARB2-205ENST00000511129 MDKP21741 143 aaPredicted RBP3.46□□□□□ -1.86
SCARB2-205ENST00000511129 ADIRFQ15847 76 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 HIGD2BQ4VC39 106 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 LGALS9CQ6DKI2 356 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 MRPL54Q6P161 138 aaKnown RBP3.46□□□□□ -1.86
SCARB2-205ENST00000511129 Q8N7P7 452 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 POM121L12Q8N7R1 296 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 CMTM2Q8TAZ6 248 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 SMIM7Q9BQ49 75 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 XAGE1AQ9HD64 81 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 MANBALQ9NQG1 85 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 LINC00312Q9Y6C7 94 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 ARFGEF3Q5TH69 2177 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 CR1P17927 2039 aa3.46□□□□□ -1.86
SCARB2-205ENST00000511129 CMYA5Q8N3K9 4069 aa3.45□□□□□ -1.86
SCARB2-205ENST00000511129 ATRQ13535 2644 aa3.45□□□□□ -1.86
SCARB2-205ENST00000511129 TRBV20-1A0A075B6N2 111 aa3.45□□□□□ -1.86
SCARB2-205ENST00000511129 IGHV3-43A0A0B4J1X8 118 aa3.45□□□□□ -1.86
SCARB2-205ENST00000511129 IGHV3-66A0A0C4DH42 116 aa3.45□□□□□ -1.86
SCARB2-205ENST00000511129 IGKV1-9A0A0C4DH69 117 aa3.45□□□□□ -1.86
SCARB2-205ENST00000511129 ZFP92A6NM28 416 aa3.45□□□□□ -1.86
SCARB2-205ENST00000511129 CEBPZOSA8MTT3 80 aa3.45□□□□□ -1.86
SCARB2-205ENST00000511129 SRRM5B3KS81 715 aa3.45□□□□□ -1.86
SCARB2-205ENST00000511129 TMEM256-PLSCR3K7ERE1 68 aa3.45□□□□□ -1.86
SCARB2-205ENST00000511129 NUPR1O60356 82 aa3.45□□□□□ -1.86
SCARB2-205ENST00000511129 GYPAP02724 150 aa3.45□□□□□ -1.86
SCARB2-205ENST00000511129 IGLC2P0DOY2 106 aa3.45□□□□□ -1.86
SCARB2-205ENST00000511129 IGLC3P0DOY3 106 aa3.45□□□□□ -1.86
SCARB2-205ENST00000511129 S100A4P26447 101 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms