RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 RS1O15537 224 aa6.74□□□□□ -1.33
HTT-205ENST00000509043 HSD52Q0P140 79 aa6.74□□□□□ -1.33
HTT-205ENST00000509043 GAGE1Q13065 139 aa6.74□□□□□ -1.33
HTT-205ENST00000509043 ZC2HC1BQ5TFG8 222 aa6.74□□□□□ -1.33
HTT-205ENST00000509043 IL17DQ8TAD2 202 aa6.74□□□□□ -1.33
HTT-205ENST00000509043 BAALCQ8WXS3 180 aa6.74□□□□□ -1.33
HTT-205ENST00000509043 TP53TG1Q9Y2A0 90 aa6.74□□□□□ -1.33
HTT-205ENST00000509043 IGHV3-53P01767 116 aa6.73□□□□□ -1.33
HTT-205ENST00000509043 NMUP48645 174 aa6.73□□□□□ -1.33
HTT-205ENST00000509043 HINT1P49773 126 aaPredicted RBP6.73□□□□□ -1.33
HTT-205ENST00000509043 PMVKQ15126 192 aa6.73□□□□□ -1.33
HTT-205ENST00000509043 ZNF124Q15973 351 aa6.73□□□□□ -1.33
HTT-205ENST00000509043 MPV17L2Q567V2 206 aa6.73□□□□□ -1.33
HTT-205ENST00000509043 BVES-AS1Q5T3Y7 98 aa6.73□□□□□ -1.33
HTT-205ENST00000509043 CFAP126Q5VTH2 177 aa6.73□□□□□ -1.33
HTT-205ENST00000509043 C2orf91Q6ZV80 131 aa6.73□□□□□ -1.33
HTT-205ENST00000509043 TMEM263Q8WUH6 116 aaKnown RBP6.73□□□□□ -1.33
HTT-205ENST00000509043 ORAOV1Q8WV07 137 aa6.73□□□□□ -1.33
HTT-205ENST00000509043 PYGO1Q9Y3Y4 419 aa6.73□□□□□ -1.33
HTT-205ENST00000509043 TNFRSF18Q9Y5U5 241 aa6.73□□□□□ -1.33
HTT-205ENST00000509043 PRSS29PA6NIE9 313 aa6.72□□□□□ -1.33
HTT-205ENST00000509043 TSHBP01222 138 aa6.72□□□□□ -1.33
HTT-205ENST00000509043 PF4P02776 101 aa6.72□□□□□ -1.33
HTT-205ENST00000509043 HTN1P15515 57 aa6.72□□□□□ -1.33
HTT-205ENST00000509043 DAZ2Q13117 558 aaKnown RBP6.72□□□□□ -1.33
HTT-205ENST00000509043 C1orf158Q8N1D5 194 aa6.72□□□□□ -1.33
HTT-205ENST00000509043 LINC00482Q8N8I6 264 aa6.72□□□□□ -1.33
HTT-205ENST00000509043 C20orf203Q8NBC4 194 aa6.72□□□□□ -1.33
HTT-205ENST00000509043 C16orf74Q96GX8 76 aa6.72□□□□□ -1.33
HTT-205ENST00000509043 XCL2Q9UBD3 114 aa6.72□□□□□ -1.33
HTT-205ENST00000509043 TLN2Q9Y4G6 2542 aa6.71□□□□□ -1.34
HTT-205ENST00000509043 TRBV10-1A0A0K0K1A3 114 aa6.71□□□□□ -1.34
HTT-205ENST00000509043 A6NDN8 102 aa6.71□□□□□ -1.34
HTT-205ENST00000509043 HERVK_113P61574 105 aa6.71□□□□□ -1.34
HTT-205ENST00000509043 TAL2Q16559 108 aa6.71□□□□□ -1.34
HTT-205ENST00000509043 LINC00469Q8N7U9 141 aa6.71□□□□□ -1.34
HTT-205ENST00000509043 RNASE8Q8TDE3 154 aaKnown RBP6.71□□□□□ -1.34
HTT-205ENST00000509043 SMR3AQ99954 134 aa6.71□□□□□ -1.34
HTT-205ENST00000509043 C19orf73Q9NVV2 129 aa6.71□□□□□ -1.34
HTT-205ENST00000509043 ITPR2Q14571 2701 aa6.71□□□□□ -1.34
HTT-205ENST00000509043 E9PLD3 99 aa6.7□□□□□ -1.34
HTT-205ENST00000509043 CRLF1O75462 422 aa6.7□□□□□ -1.34
HTT-205ENST00000509043 SMAGPQ0VAQ4 97 aa6.7□□□□□ -1.34
HTT-205ENST00000509043 GTSCR1Q86UQ5 136 aa6.7□□□□□ -1.34
HTT-205ENST00000509043 OR11H2Q8NH07 326 aa6.7□□□□□ -1.34
HTT-205ENST00000509043 CST9LQ9H4G1 147 aa6.7□□□□□ -1.34
HTT-205ENST00000509043 SPANXA1Q9NS26 97 aa6.7□□□□□ -1.34
HTT-205ENST00000509043 COX11Q9Y6N1 276 aa6.7□□□□□ -1.34
HTT-205ENST00000509043 HIVEP2P31629 2446 aa6.7□□□□□ -1.34
HTT-205ENST00000509043 NBPF19A0A087WUL8 3843 aa6.7□□□□□ -1.34
HTT-205ENST00000509043 SONP18583 2426 aaKnown RBP6.69□□□□□ -1.34
HTT-205ENST00000509043 TRAV4A0A0B4J268 109 aa6.69□□□□□ -1.34
HTT-205ENST00000509043 INAFM1C9JVW0 142 aa6.69□□□□□ -1.34
HTT-205ENST00000509043 ZNF25P17030 456 aaPredicted RBP6.69□□□□□ -1.34
HTT-205ENST00000509043 AZU1P20160 251 aa6.69□□□□□ -1.34
HTT-205ENST00000509043 C9orf66Q5T8R8 295 aa6.69□□□□□ -1.34
HTT-205ENST00000509043 NEGR1Q7Z3B1 354 aa6.69□□□□□ -1.34
HTT-205ENST00000509043 NFE4Q86UQ8 179 aa6.69□□□□□ -1.34
HTT-205ENST00000509043 PCP2Q8IVA1 136 aa6.69□□□□□ -1.34
HTT-205ENST00000509043 OR4C5Q8NGB2 326 aa6.69□□□□□ -1.34
HTT-205ENST00000509043 AKAP9Q99996 3911 aa6.68□□□□□ -1.34
HTT-205ENST00000509043 IGKV2D-26A0A0A0MRZ7 120 aa6.68□□□□□ -1.34
HTT-205ENST00000509043 C11orf86A6NJI1 115 aa6.68□□□□□ -1.34
HTT-205ENST00000509043 P0DMU3 169 aa6.68□□□□□ -1.34
HTT-205ENST00000509043 FAM231AP0DMU4 169 aa6.68□□□□□ -1.34
HTT-205ENST00000509043 FAM231CP0DMU5 169 aa6.68□□□□□ -1.34
HTT-205ENST00000509043 LCE2DQ5TA82 110 aaPredicted RBP6.68□□□□□ -1.34
HTT-205ENST00000509043 OVOL2Q9BRP0 275 aa6.68□□□□□ -1.34
HTT-205ENST00000509043 TIMM21Q9BVV7 248 aa6.68□□□□□ -1.34
HTT-205ENST00000509043 MRPL16Q9NX20 251 aaKnown RBP6.68□□□□□ -1.34
HTT-205ENST00000509043 ZNF469Q96JG9 3925 aaPredicted RBP6.68□□□□□ -1.34
HTT-205ENST00000509043 AGRNO00468 2067 aa6.67□□□□□ -1.34
HTT-205ENST00000509043 GCN1Q92616 2671 aaKnown RBP6.67□□□□□ -1.34
HTT-205ENST00000509043 TRBV25-1A0A075B6N4 114 aa6.67□□□□□ -1.34
HTT-205ENST00000509043 TRGV1A0A0A0MS02 117 aa6.67□□□□□ -1.34
HTT-205ENST00000509043 MYMXA0A1B0GTQ4 84 aa6.67□□□□□ -1.34
HTT-205ENST00000509043 SMIM9A6NGZ8 99 aa6.67□□□□□ -1.34
HTT-205ENST00000509043 GIG44P09565 113 aaPredicted RBP6.67□□□□□ -1.34
HTT-205ENST00000509043 KRTAP10-3P60369 221 aa6.67□□□□□ -1.34
HTT-205ENST00000509043 RPL39P62891 51 aaKnown RBP6.67□□□□□ -1.34
HTT-205ENST00000509043 COTL1Q14019 142 aa6.67□□□□□ -1.34
HTT-205ENST00000509043 RRN3P1Q2M238 152 aa6.67□□□□□ -1.34
HTT-205ENST00000509043 HIST2H2BDQ6DRA6 164 aa6.67□□□□□ -1.34
HTT-205ENST00000509043 DAZ4Q86SG3 579 aaKnown RBP6.67□□□□□ -1.34
HTT-205ENST00000509043 CSNK1G2-AS1Q8NCQ2 148 aa6.67□□□□□ -1.34
HTT-205ENST00000509043 CHAC1Q9BUX1 264 aa6.67□□□□□ -1.34
HTT-205ENST00000509043 VCX2Q9H322 139 aa6.67□□□□□ -1.34
HTT-205ENST00000509043 DAZ3Q9NR90 486 aaKnown RBP6.67□□□□□ -1.34
HTT-205ENST00000509043 ANK3Q12955 4377 aaKnown RBP6.66□□□□□ -1.34
HTT-205ENST00000509043 FASNP49327 2511 aaKnown RBP6.66□□□□□ -1.34
HTT-205ENST00000509043 IGLV4-69A0A075B6H9 119 aa6.66□□□□□ -1.34
HTT-205ENST00000509043 IGHV3OR16-12A0A075B7B8 117 aa6.66□□□□□ -1.34
HTT-205ENST00000509043 H3BRM9 83 aa6.66□□□□□ -1.34
HTT-205ENST00000509043 RPL36AP83881 106 aaKnown RBP6.66□□□□□ -1.34
HTT-205ENST00000509043 RPL36ALQ969Q0 106 aaKnown RBP6.66□□□□□ -1.34
HTT-205ENST00000509043 AMELXQ99217 191 aa6.66□□□□□ -1.34
HTT-205ENST00000509043 TM2D2Q9BX73 214 aa6.66□□□□□ -1.34
HTT-205ENST00000509043 IGLV4-3A0A075B6K6 122 aa6.65□□□□□ -1.34
HTT-205ENST00000509043 TRBV7-3A0A075B6L6 115 aa6.65□□□□□ -1.34
HTT-205ENST00000509043 IGHV3-73A0A0B4J1V6 119 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 239.5 ms