RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 MT1HP80294 61 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 IDO2Q6ZQW0 420 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 LINC00305Q7Z4B0 112 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 SMIM7Q9BQ49 75 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 LXNQ9BS40 222 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 UFC1Q9Y3C8 167 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 CENPEQ02224 2701 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 CDH23Q9H251 3354 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 CDK13Q14004 1512 aaKnown RBP-0.29□□□□□ -2.46
GYPB-209ENST00000508618 UTRNP46939 3433 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 LAMB1P07942 1786 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 ZNF609O15014 1411 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 KNL1Q8NG31 2342 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 CENPFP49454 3210 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 PRUNE2Q8WUY3 3088 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 TRAV13-1A0A0B4J241 112 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 TRBV10-1A0A0K0K1A3 114 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 C9JAW5 83 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 LYNX1G3V0Z9 82 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 H7BYZ3 331 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 CFDP00746 253 aaPredicted RBP-0.3□□□□□ -2.46
GYPB-209ENST00000508618 IFNA21P01568 189 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 NMBP08949 121 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 MT1HL1P0DM35 61 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 SERPINB1P30740 379 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 OR51A4Q8NGJ6 313 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 COA4Q9NYJ1 87 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 ASXL1Q8IXJ9 1541 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 SIPA1L3O60292 1781 aaPredicted RBP-0.3□□□□□ -2.46
GYPB-209ENST00000508618 CASZ1Q86V15 1759 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 MED14O60244 1454 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 NRXN2Q9P2S2 1712 aa-0.3□□□□□ -2.46
GYPB-209ENST00000508618 SMG6Q86US8 1419 aaKnown RBP-0.3□□□□□ -2.46
GYPB-209ENST00000508618 PPRC1Q5VV67 1664 aaKnown RBP-0.3□□□□□ -2.46
GYPB-209ENST00000508618 NHSL1Q5SYE7 1610 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 TRRAPQ9Y4A5 3859 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 XIRP1Q702N8 1843 aaKnown RBP-0.31□□□□□ -2.46
GYPB-209ENST00000508618 ZZEF1O43149 2961 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 HMGXB3Q12766 1538 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 TRAV17A0A0B4J275 112 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 PNMA8CA0A1B0GUJ8 204 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 S100A11P31949 105 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 BLCAPP62952 87 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 BASP1P80723 227 aaKnown RBP-0.31□□□□□ -2.46
GYPB-209ENST00000508618 TMEM78Q5T7P6 136 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 C3orf33Q6P1S2 294 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 DCUN1D2Q6PH85 259 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 UNQ5815/PRO19632Q6UWF5 114 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 OR4S1Q8NGB4 309 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 OR5A2Q8NGI9 324 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 DYDC1Q8WWB3 177 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 VPS25Q9BRG1 176 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 CCDC32Q9BV29 185 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 BPESC1Q9GZL8 116 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 LAMC1P11047 1609 aa-0.31□□□□□ -2.46
GYPB-209ENST00000508618 MYH8P13535 1937 aa-0.32□□□□□ -2.46
GYPB-209ENST00000508618 AKAP6Q13023 2319 aa-0.32□□□□□ -2.46
GYPB-209ENST00000508618 SPTBN5Q9NRC6 3674 aaKnown RBP-0.32□□□□□ -2.46
GYPB-209ENST00000508618 A2MP01023 1474 aa-0.32□□□□□ -2.46
GYPB-209ENST00000508618 MAP1LC3B2A6NCE7 125 aa-0.32□□□□□ -2.46
GYPB-209ENST00000508618 H3BMG7 143 aa-0.32□□□□□ -2.46
GYPB-209ENST00000508618 APOC1P02654 83 aa-0.32□□□□□ -2.46
GYPB-209ENST00000508618 CCKP06307 115 aa-0.32□□□□□ -2.46
GYPB-209ENST00000508618 PYYP10082 97 aa-0.32□□□□□ -2.46
GYPB-209ENST00000508618 SLC25A4P12235 298 aa-0.32□□□□□ -2.46
GYPB-209ENST00000508618 MT1GP13640 62 aa-0.32□□□□□ -2.46
GYPB-209ENST00000508618 ADCYAP1P18509 176 aa-0.32□□□□□ -2.46
GYPB-209ENST00000508618 DEFA5Q01523 94 aa-0.32□□□□□ -2.46
GYPB-209ENST00000508618 NAT14Q8WUY8 206 aa-0.32□□□□□ -2.46
GYPB-209ENST00000508618 TMEM141Q96I45 108 aa-0.32□□□□□ -2.46
GYPB-209ENST00000508618 BET1LQ9NYM9 111 aa-0.32□□□□□ -2.46
GYPB-209ENST00000508618 ATPIF1Q9UII2 106 aa-0.32□□□□□ -2.46
GYPB-209ENST00000508618 KIAA0100Q14667 2235 aaKnown RBP-0.32□□□□□ -2.46
GYPB-209ENST00000508618 MUC22E2RYF6 1773 aaPredicted RBP-0.32□□□□□ -2.46
GYPB-209ENST00000508618 XIRP2A4UGR9 3374 aa-0.32□□□□□ -2.46
GYPB-209ENST00000508618 IFT172Q9UG01 1749 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 GVQW2A0A096LPI5 108 aaPredicted RBP-0.33□□□□□ -2.46
GYPB-209ENST00000508618 TRAV2A0A0B4J234 112 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 E7EQ34 232 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 ZNF670-ZNF695F2Z2N8 137 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 H0YAA0 97 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 M0QZK8 103 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 OR2H2O95918 312 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 HBDP02042 147 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 MT1FP04733 61 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 CRYGSP22914 178 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 POLR2JP52435 117 aaKnown RBP-0.33□□□□□ -2.46
GYPB-209ENST00000508618 MT1MQ8N339 61 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 DEFB123Q8N688 67 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 OTOSQ8NHW6 89 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 SMIM11BQ8TCY0 68 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 PPDPFLQ8WWR9 84 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 MED31Q9Y3C7 131 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 DOCK11Q5JSL3 2073 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 AKAP9Q99996 3911 aa-0.33□□□□□ -2.46
GYPB-209ENST00000508618 GOLGB1Q14789 3259 aaKnown RBP-0.33□□□□□ -2.46
GYPB-209ENST00000508618 PTPRMP28827 1452 aa-0.34□□□□□ -2.46
GYPB-209ENST00000508618 GOLGA3Q08378 1498 aa-0.34□□□□□ -2.46
GYPB-209ENST00000508618 USF3Q68DE3 2245 aa-0.34□□□□□ -2.46
GYPB-209ENST00000508618 LOC107984640A0A0U1RRK4 108 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms