RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 ARFGEF3Q5TH69 2177 aa6.18□□□□□ -1.42
PDE6A-202ENST00000508173 MIFP14174 115 aa6.18□□□□□ -1.42
PDE6A-202ENST00000508173 NCR3O14931 201 aa6.18□□□□□ -1.42
PDE6A-202ENST00000508173 WFDC9Q8NEX5 89 aa6.18□□□□□ -1.42
PDE6A-202ENST00000508173 GNRH2O43555 120 aa6.18□□□□□ -1.42
PDE6A-202ENST00000508173 LINC01545Q5VT33 79 aa6.18□□□□□ -1.42
PDE6A-202ENST00000508173 TRBV7-3A0A075B6L6 115 aa6.17□□□□□ -1.42
PDE6A-202ENST00000508173 UBE2D2P62837 147 aa6.17□□□□□ -1.42
PDE6A-202ENST00000508173 IGKV1-17P01599 117 aa6.17□□□□□ -1.42
PDE6A-202ENST00000508173 SPRNQ5BIV9 151 aa6.17□□□□□ -1.42
PDE6A-202ENST00000508173 V9GYY9 64 aa6.17□□□□□ -1.42
PDE6A-202ENST00000508173 FOXI1Q12951 378 aa6.17□□□□□ -1.42
PDE6A-202ENST00000508173 C9orf85Q96MD7 179 aa6.17□□□□□ -1.42
PDE6A-202ENST00000508173 IGLV2-14P01704 120 aa6.16□□□□□ -1.42
PDE6A-202ENST00000508173 SRCAPQ6ZRS2 3230 aa6.16□□□□□ -1.42
PDE6A-202ENST00000508173 TNFRSF13BO14836 293 aaPredicted RBP6.16□□□□□ -1.42
PDE6A-202ENST00000508173 CTSZQ9UBR2 303 aa6.16□□□□□ -1.42
PDE6A-202ENST00000508173 USF3Q68DE3 2245 aa6.16□□□□□ -1.42
PDE6A-202ENST00000508173 IGHV7-81A0A0B4J1V7 117 aa6.16□□□□□ -1.42
PDE6A-202ENST00000508173 A0A1W2PNU3 283 aaPredicted RBP6.16□□□□□ -1.42
PDE6A-202ENST00000508173 IGF1P05019 195 aa6.16□□□□□ -1.42
PDE6A-202ENST00000508173 Q6YL49 198 aa6.16□□□□□ -1.42
PDE6A-202ENST00000508173 RITA1Q96K30 269 aa6.16□□□□□ -1.42
PDE6A-202ENST00000508173 C11orf1Q9H5F2 150 aa6.16□□□□□ -1.42
PDE6A-202ENST00000508173 NOTCH4Q99466 2003 aa6.16□□□□□ -1.42
PDE6A-202ENST00000508173 MT-ATP8P03928 68 aa6.16□□□□□ -1.42
PDE6A-202ENST00000508173 LYPD6Q86Y78 171 aa6.16□□□□□ -1.42
PDE6A-202ENST00000508173 MSRB1Q9NZV6 116 aa6.16□□□□□ -1.42
PDE6A-202ENST00000508173 PKDREJQ9NTG1 2253 aa6.16□□□□□ -1.42
PDE6A-202ENST00000508173 FAM236DA0A1B0GTK5 79 aa6.16□□□□□ -1.42
PDE6A-202ENST00000508173 FAM236CP0DP71 79 aa6.16□□□□□ -1.42
PDE6A-202ENST00000508173 TP53TG3Q9ULZ0 132 aa6.16□□□□□ -1.42
PDE6A-202ENST00000508173 J3QQQ9 107 aa6.15□□□□□ -1.42
PDE6A-202ENST00000508173 HIGD2BQ4VC39 106 aa6.15□□□□□ -1.42
PDE6A-202ENST00000508173 LINC00474Q9P2X8 69 aa6.15□□□□□ -1.42
PDE6A-202ENST00000508173 F8VRH5 84 aa6.15□□□□□ -1.42
PDE6A-202ENST00000508173 ZNF491Q8N8L2 437 aa6.15□□□□□ -1.42
PDE6A-202ENST00000508173 ADAMTS9Q9P2N4 1935 aa6.15□□□□□ -1.42
PDE6A-202ENST00000508173 DENND4CQ5VZ89 1909 aa6.15□□□□□ -1.42
PDE6A-202ENST00000508173 IGHG2P01859 326 aa6.15□□□□□ -1.43
PDE6A-202ENST00000508173 GDF5OSQ5U4N7 250 aa6.15□□□□□ -1.43
PDE6A-202ENST00000508173 H0YGX0 51 aa6.15□□□□□ -1.43
PDE6A-202ENST00000508173 LINC01620Q4KN68 170 aa6.15□□□□□ -1.43
PDE6A-202ENST00000508173 RPL39LQ96EH5 51 aaKnown RBP6.15□□□□□ -1.43
PDE6A-202ENST00000508173 CADP27708 2225 aa6.15□□□□□ -1.43
PDE6A-202ENST00000508173 HEATR5AQ86XA9 2040 aa6.15□□□□□ -1.43
PDE6A-202ENST00000508173 ARHGEF17Q96PE2 2063 aaPredicted RBP6.15□□□□□ -1.43
PDE6A-202ENST00000508173 C16orf54Q6UWD8 224 aa6.14□□□□□ -1.43
PDE6A-202ENST00000508173 TEX22C9J3V5 150 aa6.14□□□□□ -1.43
PDE6A-202ENST00000508173 FAM222AQ5U5X8 452 aa6.14□□□□□ -1.43
PDE6A-202ENST00000508173 SND1-IT1Q9HBX3 110 aa6.14□□□□□ -1.43
PDE6A-202ENST00000508173 A6NDX4 124 aa6.14□□□□□ -1.43
PDE6A-202ENST00000508173 C19orf84I3L1E1 186 aa6.14□□□□□ -1.43
PDE6A-202ENST00000508173 CLUHP3Q96NS8 147 aa6.14□□□□□ -1.43
PDE6A-202ENST00000508173 BRK1Q8WUW1 75 aa6.14□□□□□ -1.43
PDE6A-202ENST00000508173 J3KT08 172 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 CFC1BP0CG36 223 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 CFC1P0CG37 223 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 MAP6D1Q9H9H5 199 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 U3KQK5 164 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 FAM236AA0A1B0GUQ0 79 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 FAM236BA0A1B0GV22 79 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 NHLRC4P0CG21 123 aaPredicted RBP6.13□□□□□ -1.43
PDE6A-202ENST00000508173 COX7BP24311 80 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 PATE2Q6UY27 113 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 UPK3BQ9BT76 320 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 AGPAT4-IT1Q9H0P7 198 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 ARHGAP21Q5T5U3 1957 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 MED12Q93074 2177 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 A0A096LNI7 61 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 ZGRF1Q86YA3 2104 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 MUSTN1Q8IVN3 82 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 SPATA3Q8NHX4 192 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 OBSL1O75147 1896 aa6.13□□□□□ -1.43
PDE6A-202ENST00000508173 IGKV1D-37A0A075B6S9 117 aa6.12□□□□□ -1.43
PDE6A-202ENST00000508173 UFSP1Q6NVU6 142 aa6.12□□□□□ -1.43
PDE6A-202ENST00000508173 TMEM61Q8N0U2 210 aa6.12□□□□□ -1.43
PDE6A-202ENST00000508173 Q8N9W7 124 aa6.12□□□□□ -1.43
PDE6A-202ENST00000508173 IGKV3D-7A0A0C4DH55 119 aa6.12□□□□□ -1.43
PDE6A-202ENST00000508173 PSMG3-AS1Q96PY0 264 aa6.12□□□□□ -1.43
PDE6A-202ENST00000508173 REG3AQ06141 175 aa6.12□□□□□ -1.43
PDE6A-202ENST00000508173 Q8N976 141 aa6.12□□□□□ -1.43
PDE6A-202ENST00000508173 CLEC2BQ92478 149 aa6.12□□□□□ -1.43
PDE6A-202ENST00000508173 DAND5Q8N907 189 aa6.11□□□□□ -1.43
PDE6A-202ENST00000508173 BBC3Q96PG8 261 aaPredicted RBP6.11□□□□□ -1.43
PDE6A-202ENST00000508173 SPANXB1Q9NS25 103 aaPredicted RBP6.11□□□□□ -1.43
PDE6A-202ENST00000508173 YLPM1P49750 1951 aaKnown RBP6.11□□□□□ -1.43
PDE6A-202ENST00000508173 CTRLP40313 264 aa6.11□□□□□ -1.43
PDE6A-202ENST00000508173 Q6ZPA2 131 aa6.11□□□□□ -1.43
PDE6A-202ENST00000508173 FAM19A5Q7Z5A7 132 aaPredicted RBP6.11□□□□□ -1.43
PDE6A-202ENST00000508173 SPTSSBQ8NFR3 76 aa6.11□□□□□ -1.43
PDE6A-202ENST00000508173 DOCK9Q9BZ29 2069 aa6.11□□□□□ -1.43
PDE6A-202ENST00000508173 KIAA2026Q5HYC2 2103 aa6.11□□□□□ -1.43
PDE6A-202ENST00000508173 ZNF295-AS1Q8N0V1 137 aa6.11□□□□□ -1.43
PDE6A-202ENST00000508173 NAV3Q8IVL0 2385 aa6.11□□□□□ -1.43
PDE6A-202ENST00000508173 IGHV1-58A0A0C4DH39 117 aa6.1□□□□□ -1.43
PDE6A-202ENST00000508173 PRB2P02812 416 aaPredicted RBP6.1□□□□□ -1.43
PDE6A-202ENST00000508173 BAALC-AS2P0C853 105 aa6.1□□□□□ -1.43
PDE6A-202ENST00000508173 Q6ZUT4 128 aa6.1□□□□□ -1.43
PDE6A-202ENST00000508173 C11orf53Q8IXP5 236 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms