RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 WNK1Q9H4A3 2382 aa8.05□□□□□ -1.12
LIN54-207ENST00000508171 TRBV6-5A0A0K0K1A5 114 aa8.05□□□□□ -1.12
LIN54-207ENST00000508171 SCGB2A2Q13296 93 aa8.05□□□□□ -1.12
LIN54-207ENST00000508171 FOXI2Q6ZQN5 318 aa8.05□□□□□ -1.12
LIN54-207ENST00000508171 P0DMU3 169 aa8.05□□□□□ -1.12
LIN54-207ENST00000508171 FAM231AP0DMU4 169 aa8.05□□□□□ -1.12
LIN54-207ENST00000508171 FAM231CP0DMU5 169 aa8.05□□□□□ -1.12
LIN54-207ENST00000508171 ZNRF2Q8NHG8 242 aa8.05□□□□□ -1.12
LIN54-207ENST00000508171 IGHV3-73A0A0B4J1V6 119 aa8.04□□□□□ -1.12
LIN54-207ENST00000508171 RIPPLY3P57055 190 aa8.04□□□□□ -1.12
LIN54-207ENST00000508171 DEFB131AP59861 70 aa8.04□□□□□ -1.12
LIN54-207ENST00000508171 SCGB1D4Q6XE38 83 aa8.04□□□□□ -1.12
LIN54-207ENST00000508171 ZNF479Q96JC4 524 aa8.04□□□□□ -1.12
LIN54-207ENST00000508171 PRRC2AP48634 2157 aaKnown RBP8.04□□□□□ -1.12
LIN54-207ENST00000508171 NACAE9PAV3 2078 aa8.04□□□□□ -1.12
LIN54-207ENST00000508171 PROK1P58294 105 aa8.04□□□□□ -1.12
LIN54-207ENST00000508171 TMEM170BQ5T4T1 132 aa8.04□□□□□ -1.12
LIN54-207ENST00000508171 TMEM141Q96I45 108 aa8.04□□□□□ -1.12
LIN54-207ENST00000508171 TIMM17AQ99595 171 aa8.04□□□□□ -1.12
LIN54-207ENST00000508171 RNF152Q8N8N0 203 aa8.03□□□□□ -1.12
LIN54-207ENST00000508171 NIPBLQ6KC79 2804 aaeCLIP8.03□□□□□ -1.12
LIN54-207ENST00000508171 LINC01619G3V211 115 aa8.03□□□□□ -1.12
LIN54-207ENST00000508171 TSPEAR-AS2P59090 65 aa8.03□□□□□ -1.12
LIN54-207ENST00000508171 G3V4G9 280 aa8.02□□□□□ -1.13
LIN54-207ENST00000508171 H3BMG7 143 aa8.02□□□□□ -1.13
LIN54-207ENST00000508171 SRSF9Q13242 221 aaKnown RBP eCLIP8.02□□□□□ -1.13
LIN54-207ENST00000508171 Q5PR19 223 aa8.02□□□□□ -1.13
LIN54-207ENST00000508171 TRPT1Q86TN4 253 aaKnown RBP8.02□□□□□ -1.13
LIN54-207ENST00000508171 ITPR3Q14573 2671 aa8.02□□□□□ -1.13
LIN54-207ENST00000508171 RBMY1BA6NDE4 496 aaKnown RBP8.02□□□□□ -1.13
LIN54-207ENST00000508171 RBMY1EA6NEQ0 496 aaKnown RBP8.02□□□□□ -1.13
LIN54-207ENST00000508171 RBMY1DP0C7P1 496 aaKnown RBP8.02□□□□□ -1.13
LIN54-207ENST00000508171 Q9UF83 564 aa8.02□□□□□ -1.13
LIN54-207ENST00000508171 A0A1B0GWB2 263 aa8.01□□□□□ -1.13
LIN54-207ENST00000508171 LINC01549A6NIU2 74 aa8.01□□□□□ -1.13
LIN54-207ENST00000508171 RRN3P1Q2M238 152 aa8.01□□□□□ -1.13
LIN54-207ENST00000508171 TMEM61Q8N0U2 210 aa8.01□□□□□ -1.13
LIN54-207ENST00000508171 SVIPQ8NHG7 77 aa8.01□□□□□ -1.13
LIN54-207ENST00000508171 SETD2Q9BYW2 2564 aaPredicted RBP8.01□□□□□ -1.13
LIN54-207ENST00000508171 H3BMM0 161 aa8.01□□□□□ -1.13
LIN54-207ENST00000508171 RPL24P83731 157 aaKnown RBP8.01□□□□□ -1.13
LIN54-207ENST00000508171 KHDC1LQ5JSQ8 128 aa8.01□□□□□ -1.13
LIN54-207ENST00000508171 PAPPA-AS1Q5QFB9 102 aa8.01□□□□□ -1.13
LIN54-207ENST00000508171 ZNF843Q8N446 348 aa8.01□□□□□ -1.13
LIN54-207ENST00000508171 Q96MF0 132 aa8.01□□□□□ -1.13
LIN54-207ENST00000508171 TRGV11A0A075B6L2 103 aa8□□□□□ -1.13
LIN54-207ENST00000508171 A0A0J9YY99 117 aa8□□□□□ -1.13
LIN54-207ENST00000508171 I3L3M4 83 aa8□□□□□ -1.13
LIN54-207ENST00000508171 WFDC2Q14508 124 aa8□□□□□ -1.13
LIN54-207ENST00000508171 DEFB113Q30KQ7 82 aa8□□□□□ -1.13
LIN54-207ENST00000508171 NSUN5P1Q3KNT7 163 aa8□□□□□ -1.13
LIN54-207ENST00000508171 MTURNQ8N3F0 131 aa8□□□□□ -1.13
LIN54-207ENST00000508171 C20orf203Q8NBC4 194 aa8□□□□□ -1.13
LIN54-207ENST00000508171 DLX4Q92988 240 aaPredicted RBP8□□□□□ -1.13
LIN54-207ENST00000508171 HERVK_113P61574 105 aa8□□□□□ -1.13
LIN54-207ENST00000508171 TEX48A0A1B0GUV7 120 aa7.99□□□□□ -1.13
LIN54-207ENST00000508171 SFTA2Q6UW10 78 aa7.99□□□□□ -1.13
LIN54-207ENST00000508171 CCDC168Q8NDH2 2452 aa7.99□□□□□ -1.13
LIN54-207ENST00000508171 RHOHQ15669 191 aa7.99□□□□□ -1.13
LIN54-207ENST00000508171 Q8N2B8 174 aa7.99□□□□□ -1.13
LIN54-207ENST00000508171 PGPEP1Q9NXJ5 209 aa7.99□□□□□ -1.13
LIN54-207ENST00000508171 NOTCH3Q9UM47 2321 aa7.99□□□□□ -1.13
LIN54-207ENST00000508171 IGHV3-64A0A075B6Q5 118 aa7.98□□□□□ -1.13
LIN54-207ENST00000508171 Q6ZSN1 163 aa7.98□□□□□ -1.13
LIN54-207ENST00000508171 AMELXQ99217 191 aa7.98□□□□□ -1.13
LIN54-207ENST00000508171 J3QQQ9 107 aa7.98□□□□□ -1.13
LIN54-207ENST00000508171 APOMO95445 188 aa7.98□□□□□ -1.13
LIN54-207ENST00000508171 CEMP1Q6PRD7 247 aaPredicted RBP7.98□□□□□ -1.13
LIN54-207ENST00000508171 SPAG8Q99932 426 aaPredicted RBP7.98□□□□□ -1.13
LIN54-207ENST00000508171 MRPL16Q9NX20 251 aaKnown RBP7.98□□□□□ -1.13
LIN54-207ENST00000508171 IGLV4-3A0A075B6K6 122 aa7.97□□□□□ -1.13
LIN54-207ENST00000508171 A0A0J9YXV3 536 aa7.97□□□□□ -1.13
LIN54-207ENST00000508171 UBE2D1P51668 147 aa7.97□□□□□ -1.13
LIN54-207ENST00000508171 NFE4Q86UQ8 179 aa7.97□□□□□ -1.13
LIN54-207ENST00000508171 FLNAP21333 2647 aaKnown RBP7.97□□□□□ -1.13
LIN54-207ENST00000508171 SH2D6Q7Z4S9 175 aa7.97□□□□□ -1.13
LIN54-207ENST00000508171 FAM104AQ969W3 186 aa7.97□□□□□ -1.13
LIN54-207ENST00000508171 MAP6D1Q9H9H5 199 aa7.97□□□□□ -1.13
LIN54-207ENST00000508171 TMEM223A0PJW6 202 aa7.96□□□□□ -1.13
LIN54-207ENST00000508171 A8MTW9 85 aa7.96□□□□□ -1.13
LIN54-207ENST00000508171 F8W1H4 67 aa7.96□□□□□ -1.13
LIN54-207ENST00000508171 KRTAP1-3Q8IUG1 177 aa7.96□□□□□ -1.13
LIN54-207ENST00000508171 C11orf44Q8N8P7 122 aa7.96□□□□□ -1.13
LIN54-207ENST00000508171 SLC25A29Q8N8R3 303 aa7.96□□□□□ -1.13
LIN54-207ENST00000508171 C4orf3Q8WVX3 66 aa7.96□□□□□ -1.13
LIN54-207ENST00000508171 VCX2Q9H322 139 aa7.96□□□□□ -1.13
LIN54-207ENST00000508171 PEMTQ9UBM1 199 aa7.96□□□□□ -1.13
LIN54-207ENST00000508171 IGHV3-30P01768 117 aa7.96□□□□□ -1.14
LIN54-207ENST00000508171 IGHV3-30-5P0DP03 117 aa7.96□□□□□ -1.14
LIN54-207ENST00000508171 DEFB114Q30KQ6 69 aa7.96□□□□□ -1.14
LIN54-207ENST00000508171 ETDBQ3ZM63 59 aa7.96□□□□□ -1.14
LIN54-207ENST00000508171 RNASE13Q5GAN3 156 aaKnown RBP7.96□□□□□ -1.14
LIN54-207ENST00000508171 TMEM238LA0A1B0GVL6 79 aa7.96□□□□□ -1.14
LIN54-207ENST00000508171 A6NJY4 79 aa7.96□□□□□ -1.14
LIN54-207ENST00000508171 M0R2P5 195 aa7.96□□□□□ -1.14
LIN54-207ENST00000508171 CD28P10747 220 aa7.96□□□□□ -1.14
LIN54-207ENST00000508171 ZNF22P17026 224 aaPredicted RBP7.96□□□□□ -1.14
LIN54-207ENST00000508171 LGALS3P17931 250 aaKnown RBP7.96□□□□□ -1.14
LIN54-207ENST00000508171 DYNLRB2Q8TF09 96 aa7.96□□□□□ -1.14
LIN54-207ENST00000508171 LINC01587Q99440 93 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms