RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 NUDT3O95989 172 aa11.92□□□□□ -0.5
DDX41-207ENST00000507900 LGALS9CQ6DKI2 356 aa11.92□□□□□ -0.5
DDX41-207ENST00000507900 PRO1933Q9H354 126 aa11.92□□□□□ -0.5
DDX41-207ENST00000507900 IGHV3-53P01767 116 aa11.91□□□□□ -0.5
DDX41-207ENST00000507900 G0S2P27469 103 aa11.91□□□□□ -0.5
DDX41-207ENST00000507900 TOMM6Q96B49 74 aa11.91□□□□□ -0.5
DDX41-207ENST00000507900 KIR2DL4Q99706 377 aa11.91□□□□□ -0.5
DDX41-207ENST00000507900 FBN1P35555 2871 aaKnown RBP11.9□□□□□ -0.5
DDX41-207ENST00000507900 TRAV9-2A0A087WT02 112 aa11.9□□□□□ -0.5
DDX41-207ENST00000507900 TRGV1A0A0A0MS02 117 aa11.9□□□□□ -0.5
DDX41-207ENST00000507900 LINC01549A6NIU2 74 aa11.9□□□□□ -0.5
DDX41-207ENST00000507900 PAM16Q9Y3D7 125 aa11.9□□□□□ -0.5
DDX41-207ENST00000507900 IGHV3-73A0A0B4J1V6 119 aa11.89□□□□□ -0.51
DDX41-207ENST00000507900 TRAV4A0A0B4J268 109 aa11.89□□□□□ -0.51
DDX41-207ENST00000507900 APOC4P55056 127 aa11.89□□□□□ -0.51
DDX41-207ENST00000507900 Q6ZTI0 123 aa11.89□□□□□ -0.51
DDX41-207ENST00000507900 NEGR1Q7Z3B1 354 aa11.89□□□□□ -0.51
DDX41-207ENST00000507900 C18orf15Q96N68 181 aa11.89□□□□□ -0.51
DDX41-207ENST00000507900 NOTCH3Q9UM47 2321 aa11.88□□□□□ -0.51
DDX41-207ENST00000507900 SMIM9A6NGZ8 99 aa11.88□□□□□ -0.51
DDX41-207ENST00000507900 RIPPLY3P57055 190 aa11.88□□□□□ -0.51
DDX41-207ENST00000507900 Q6ZSN1 163 aa11.88□□□□□ -0.51
DDX41-207ENST00000507900 ATOH7Q8N100 152 aa11.88□□□□□ -0.51
DDX41-207ENST00000507900 OR4C5Q8NGB2 326 aa11.88□□□□□ -0.51
DDX41-207ENST00000507900 DNAJC30Q96LL9 226 aa11.88□□□□□ -0.51
DDX41-207ENST00000507900 NOP10Q9NPE3 64 aaKnown RBP11.88□□□□□ -0.51
DDX41-207ENST00000507900 H0Y8G0 127 aa11.88□□□□□ -0.51
DDX41-207ENST00000507900 CIDEAO60543 219 aa11.88□□□□□ -0.51
DDX41-207ENST00000507900 RHOHQ15669 191 aa11.88□□□□□ -0.51
DDX41-207ENST00000507900 SPATA45Q537H7 98 aa11.88□□□□□ -0.51
DDX41-207ENST00000507900 LINC00587B1AMM8 73 aa11.87□□□□□ -0.51
DDX41-207ENST00000507900 I3L3M4 83 aa11.87□□□□□ -0.51
DDX41-207ENST00000507900 DDTP30046 118 aa11.87□□□□□ -0.51
DDX41-207ENST00000507900 C2orf66Q6UXQ4 117 aa11.87□□□□□ -0.51
DDX41-207ENST00000507900 X6R8D5 127 aa11.87□□□□□ -0.51
DDX41-207ENST00000507900 EGFEM1PQ0D2K5 195 aa11.86□□□□□ -0.51
DDX41-207ENST00000507900 NEXN-AS1Q8NBZ9 246 aa11.86□□□□□ -0.51
DDX41-207ENST00000507900 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.85□□□□□ -0.51
DDX41-207ENST00000507900 TSHBP01222 138 aa11.85□□□□□ -0.51
DDX41-207ENST00000507900 P0DMU3 169 aa11.85□□□□□ -0.51
DDX41-207ENST00000507900 FAM231AP0DMU4 169 aa11.85□□□□□ -0.51
DDX41-207ENST00000507900 FAM231CP0DMU5 169 aa11.85□□□□□ -0.51
DDX41-207ENST00000507900 ZNF479Q96JC4 524 aa11.85□□□□□ -0.51
DDX41-207ENST00000507900 CYSLTR1Q9Y271 337 aa11.85□□□□□ -0.51
DDX41-207ENST00000507900 ODF1Q14990 250 aa11.84□□□□□ -0.51
DDX41-207ENST00000507900 MAJINQ3KP22 176 aa11.84□□□□□ -0.51
DDX41-207ENST00000507900 LINC00612Q8N6U2 182 aa11.84□□□□□ -0.51
DDX41-207ENST00000507900 SCGB3A1Q96QR1 104 aa11.84□□□□□ -0.51
DDX41-207ENST00000507900 TNFRSF18Q9Y5U5 241 aa11.84□□□□□ -0.51
DDX41-207ENST00000507900 TRRAPQ9Y4A5 3859 aa11.84□□□□□ -0.51
DDX41-207ENST00000507900 TRBV10-1A0A0K0K1A3 114 aa11.84□□□□□ -0.51
DDX41-207ENST00000507900 IGHV4-30-4P0DP06 118 aa11.84□□□□□ -0.51
DDX41-207ENST00000507900 OXLD1Q5BKU9 147 aa11.84□□□□□ -0.51
DDX41-207ENST00000507900 ERASQ7Z444 233 aa11.84□□□□□ -0.51
DDX41-207ENST00000507900 PMCHL2Q9BQD1 86 aa11.84□□□□□ -0.51
DDX41-207ENST00000507900 ZMAT4Q9H898 229 aa11.84□□□□□ -0.51
DDX41-207ENST00000507900 TRAV12-1A0A0B4J245 112 aa11.83□□□□□ -0.52
DDX41-207ENST00000507900 PRSS1P07477 247 aa11.83□□□□□ -0.52
DDX41-207ENST00000507900 ZMAT5Q9UDW3 170 aaKnown RBP11.83□□□□□ -0.52
DDX41-207ENST00000507900 GAGE12BA1L429 117 aa11.82□□□□□ -0.52
DDX41-207ENST00000507900 GAGE7O76087 117 aa11.82□□□□□ -0.52
DDX41-207ENST00000507900 GAGE12FP0CL80 117 aa11.82□□□□□ -0.52
DDX41-207ENST00000507900 GAGE12GP0CL81 117 aa11.82□□□□□ -0.52
DDX41-207ENST00000507900 GAGE12IP0CL82 117 aa11.82□□□□□ -0.52
DDX41-207ENST00000507900 MIEN1Q9BRT3 115 aa11.82□□□□□ -0.52
DDX41-207ENST00000507900 Q9UF83 564 aa11.82□□□□□ -0.52
DDX41-207ENST00000507900 TP53TG1Q9Y2A0 90 aa11.82□□□□□ -0.52
DDX41-207ENST00000507900 hDV102S1A0JD36 115 aa11.81□□□□□ -0.52
DDX41-207ENST00000507900 IGIPA6NJ69 53 aa11.81□□□□□ -0.52
DDX41-207ENST00000507900 A8MZ25 164 aa11.81□□□□□ -0.52
DDX41-207ENST00000507900 HSBP1L1C9JCN9 74 aa11.81□□□□□ -0.52
DDX41-207ENST00000507900 K7EQD1 137 aa11.81□□□□□ -0.52
DDX41-207ENST00000507900 IGLC3P0DOY3 106 aa11.81□□□□□ -0.52
DDX41-207ENST00000507900 KRTAP10-11P60412 298 aa11.81□□□□□ -0.52
DDX41-207ENST00000507900 Q6ZN92 141 aa11.81□□□□□ -0.52
DDX41-207ENST00000507900 TIMM17AQ99595 171 aa11.81□□□□□ -0.52
DDX41-207ENST00000507900 DKK2Q9UBU2 259 aa11.81□□□□□ -0.52
DDX41-207ENST00000507900 TRGV2A0A075B6R0 118 aa11.8□□□□□ -0.52
DDX41-207ENST00000507900 A0A087WX48 190 aa11.8□□□□□ -0.52
DDX41-207ENST00000507900 DEFB135Q30KP9 77 aa11.8□□□□□ -0.52
DDX41-207ENST00000507900 C20orf203Q8NBC4 194 aa11.8□□□□□ -0.52
DDX41-207ENST00000507900 TMEM141Q96I45 108 aa11.8□□□□□ -0.52
DDX41-207ENST00000507900 BAALCQ8WXS3 180 aa11.79□□□□□ -0.52
DDX41-207ENST00000507900 TRBV7-3A0A075B6L6 115 aa11.79□□□□□ -0.52
DDX41-207ENST00000507900 TRBV6-4A0A1B0GX49 114 aa11.79□□□□□ -0.52
DDX41-207ENST00000507900 RPL39P62891 51 aaKnown RBP11.79□□□□□ -0.52
DDX41-207ENST00000507900 SLC25A29Q8N8R3 303 aa11.79□□□□□ -0.52
DDX41-207ENST00000507900 UQCR10Q9UDW1 63 aa11.79□□□□□ -0.52
DDX41-207ENST00000507900 DEFB104AQ8WTQ1 72 aa11.78□□□□□ -0.52
DDX41-207ENST00000507900 STAB1Q9NY15 2570 aa11.77□□□□□ -0.52
DDX41-207ENST00000507900 LYRM9A8MSI8 78 aa11.77□□□□□ -0.53
DDX41-207ENST00000507900 F8VRH5 84 aa11.77□□□□□ -0.53
DDX41-207ENST00000507900 DPM2O94777 84 aa11.77□□□□□ -0.53
DDX41-207ENST00000507900 IGKCP01834 107 aa11.77□□□□□ -0.53
DDX41-207ENST00000507900 MIFP14174 115 aa11.77□□□□□ -0.53
DDX41-207ENST00000507900 EMP1P54849 157 aa11.77□□□□□ -0.53
DDX41-207ENST00000507900 RPL36AP83881 106 aaKnown RBP11.77□□□□□ -0.53
DDX41-207ENST00000507900 OR11H2Q8NH07 326 aa11.77□□□□□ -0.53
DDX41-207ENST00000507900 RPL36ALQ969Q0 106 aaKnown RBP11.77□□□□□ -0.53
DDX41-207ENST00000507900 RNF183Q96D59 192 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms