RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 RRAS2P62070 204 aaPredicted RBP-0.06□□□□□ -2.42
LSM6-205ENST00000507449 WFDC6Q9BQY6 131 aa-0.06□□□□□ -2.42
LSM6-205ENST00000507449 TPT1P8Q9HAU6 139 aa-0.06□□□□□ -2.42
LSM6-205ENST00000507449 GOLGA3Q08378 1498 aa-0.06□□□□□ -2.42
LSM6-205ENST00000507449 NCOR2Q9Y618 2525 aa-0.07□□□□□ -2.42
LSM6-205ENST00000507449 AKAP11Q9UKA4 1901 aa-0.07□□□□□ -2.42
LSM6-205ENST00000507449 G3V318 75 aa-0.07□□□□□ -2.42
LSM6-205ENST00000507449 COPZ1P61923 177 aa-0.07□□□□□ -2.42
LSM6-205ENST00000507449 RPL7L1Q6DKI1 246 aaKnown RBP-0.07□□□□□ -2.42
LSM6-205ENST00000507449 SCIMPQ6UWF3 145 aa-0.07□□□□□ -2.42
LSM6-205ENST00000507449 SPTSSBQ8NFR3 76 aa-0.07□□□□□ -2.42
LSM6-205ENST00000507449 PTPRZ1P23471 2315 aaPredicted RBP-0.07□□□□□ -2.42
LSM6-205ENST00000507449 UNC79Q9P2D8 2635 aa-0.07□□□□□ -2.42
LSM6-205ENST00000507449 MYO7AQ13402 2215 aa-0.07□□□□□ -2.42
LSM6-205ENST00000507449 ZMYM4Q5VZL5 1548 aa-0.08□□□□□ -2.42
LSM6-205ENST00000507449 A6NIN4 97 aa-0.08□□□□□ -2.42
LSM6-205ENST00000507449 PIPP12273 146 aaPredicted RBP-0.08□□□□□ -2.42
LSM6-205ENST00000507449 CBLN1P23435 193 aa-0.08□□□□□ -2.42
LSM6-205ENST00000507449 GCHFRP30047 84 aa-0.08□□□□□ -2.42
LSM6-205ENST00000507449 S100A7L2Q5SY68 101 aa-0.08□□□□□ -2.42
LSM6-205ENST00000507449 SPTSSAQ969W0 71 aa-0.08□□□□□ -2.42
LSM6-205ENST00000507449 KIAA0100Q14667 2235 aaKnown RBP-0.08□□□□□ -2.42
LSM6-205ENST00000507449 NDUFB6O95139 128 aa-0.09□□□□□ -2.42
LSM6-205ENST00000507449 IFNA17P01571 189 aa-0.09□□□□□ -2.42
LSM6-205ENST00000507449 DMBT1Q9UGM3 2413 aaPredicted RBP-0.09□□□□□ -2.42
LSM6-205ENST00000507449 F8P00451 2351 aa-0.1□□□□□ -2.42
LSM6-205ENST00000507449 NEBP20929 6669 aa-0.1□□□□□ -2.43
LSM6-205ENST00000507449 CADP27708 2225 aa-0.1□□□□□ -2.43
LSM6-205ENST00000507449 DAPK1P53355 1430 aa-0.1□□□□□ -2.43
LSM6-205ENST00000507449 TRAV1-2A0A0B4J238 106 aa-0.1□□□□□ -2.43
LSM6-205ENST00000507449 SNCGO76070 127 aa-0.1□□□□□ -2.43
LSM6-205ENST00000507449 GUCA1AP43080 201 aaPredicted RBP-0.1□□□□□ -2.43
LSM6-205ENST00000507449 SMCO1Q147U7 214 aa-0.1□□□□□ -2.43
LSM6-205ENST00000507449 ZNF818PQ6ZRF7 136 aa-0.1□□□□□ -2.43
LSM6-205ENST00000507449 KCNRGQ8N5I3 272 aa-0.1□□□□□ -2.43
LSM6-205ENST00000507449 FAM213BQ8TBF2 198 aa-0.1□□□□□ -2.43
LSM6-205ENST00000507449 DPH3Q96FX2 82 aa-0.1□□□□□ -2.43
LSM6-205ENST00000507449 MYH6P13533 1939 aa-0.11□□□□□ -2.43
LSM6-205ENST00000507449 APOC4-APOC2K7ER74 178 aa-0.11□□□□□ -2.43
LSM6-205ENST00000507449 SSBP3-AS1Q7Z2R9 100 aa-0.11□□□□□ -2.43
LSM6-205ENST00000507449 TMEM191AQ9H0A3 160 aa-0.11□□□□□ -2.43
LSM6-205ENST00000507449 LINC00312Q9Y6C7 94 aa-0.11□□□□□ -2.43
LSM6-205ENST00000507449 U3KQA8 63 aa-0.11□□□□□ -2.43
LSM6-205ENST00000507449 ARFGEF1Q9Y6D6 1849 aa-0.11□□□□□ -2.43
LSM6-205ENST00000507449 HIVEP3Q5T1R4 2406 aa-0.12□□□□□ -2.43
LSM6-205ENST00000507449 ZNF815PA8K554 130 aa-0.12□□□□□ -2.43
LSM6-205ENST00000507449 Q5VV11 94 aa-0.12□□□□□ -2.43
LSM6-205ENST00000507449 TCEAL4Q96EI5 215 aa-0.12□□□□□ -2.43
LSM6-205ENST00000507449 SCP2D1Q9UJQ7 156 aa-0.12□□□□□ -2.43
LSM6-205ENST00000507449 CASKIN1Q8WXD9 1431 aa-0.13□□□□□ -2.43
LSM6-205ENST00000507449 DOCK11Q5JSL3 2073 aa-0.13□□□□□ -2.43
LSM6-205ENST00000507449 SIPA1L3O60292 1781 aaPredicted RBP-0.13□□□□□ -2.43
LSM6-205ENST00000507449 CCL8P80075 99 aa-0.13□□□□□ -2.43
LSM6-205ENST00000507449 UBE2DNLQ8IWF7 75 aa-0.13□□□□□ -2.43
LSM6-205ENST00000507449 PFDN5Q99471 154 aa-0.13□□□□□ -2.43
LSM6-205ENST00000507449 BICRAQ9NZM4 1560 aa-0.14□□□□□ -2.43
LSM6-205ENST00000507449 TRBV10-3A0A0K0K1G6 114 aa-0.14□□□□□ -2.43
LSM6-205ENST00000507449 HIST1H1DP16402 221 aaKnown RBP-0.14□□□□□ -2.43
LSM6-205ENST00000507449 KRTAP6-1Q3LI64 71 aa-0.14□□□□□ -2.43
LSM6-205ENST00000507449 SEC11CQ9BY50 192 aa-0.14□□□□□ -2.43
LSM6-205ENST00000507449 MYOM3Q5VTT5 1437 aa-0.14□□□□□ -2.43
LSM6-205ENST00000507449 PARP14Q460N5 1801 aa-0.15□□□□□ -2.43
LSM6-205ENST00000507449 ZNF518AQ6AHZ1 1483 aa-0.15□□□□□ -2.43
LSM6-205ENST00000507449 IFT140Q96RY7 1462 aa-0.15□□□□□ -2.43
LSM6-205ENST00000507449 UBR5O95071 2799 aaPredicted RBP-0.15□□□□□ -2.43
LSM6-205ENST00000507449 GRIN2AQ12879 1464 aa-0.16□□□□□ -2.43
LSM6-205ENST00000507449 CSMD3Q7Z407 3707 aa-0.16□□□□□ -2.43
LSM6-205ENST00000507449 FAM92AA1XBS5 289 aa-0.16□□□□□ -2.44
LSM6-205ENST00000507449 HCG22E2RYF7 251 aa-0.16□□□□□ -2.44
LSM6-205ENST00000507449 ARPC4P59998 168 aa-0.16□□□□□ -2.44
LSM6-205ENST00000507449 LSM10Q969L4 123 aaKnown RBP-0.16□□□□□ -2.44
LSM6-205ENST00000507449 CCDC167Q9P0B6 97 aa-0.16□□□□□ -2.44
LSM6-205ENST00000507449 ASXL3Q9C0F0 2248 aa-0.16□□□□□ -2.44
LSM6-205ENST00000507449 TENM4Q6N022 2769 aa-0.17□□□□□ -2.44
LSM6-205ENST00000507449 CACNA1CQ13936 2221 aa-0.17□□□□□ -2.44
LSM6-205ENST00000507449 SIX6O95475 246 aa-0.17□□□□□ -2.44
LSM6-205ENST00000507449 CCL18P55774 89 aa-0.17□□□□□ -2.44
LSM6-205ENST00000507449 BAGE3Q86Y29 109 aa-0.17□□□□□ -2.44
LSM6-205ENST00000507449 CYP4F30PQ9H0H9 118 aa-0.17□□□□□ -2.44
LSM6-205ENST00000507449 NDUFA2O43678 99 aa-0.18□□□□□ -2.44
LSM6-205ENST00000507449 RBM3P98179 157 aaKnown RBP-0.18□□□□□ -2.44
LSM6-205ENST00000507449 CFAP126Q5VTH2 177 aa-0.18□□□□□ -2.44
LSM6-205ENST00000507449 PDCD10Q9BUL8 212 aa-0.18□□□□□ -2.44
LSM6-205ENST00000507449 AGPAT4-IT1Q9H0P7 198 aa-0.18□□□□□ -2.44
LSM6-205ENST00000507449 LRRC37A3O60309 1634 aa-0.18□□□□□ -2.44
LSM6-205ENST00000507449 RYR3Q15413 4870 aa-0.18□□□□□ -2.44
LSM6-205ENST00000507449 KMT2CQ8NEZ4 4911 aaKnown RBP-0.18□□□□□ -2.44
LSM6-205ENST00000507449 IFT172Q9UG01 1749 aa-0.18□□□□□ -2.44
LSM6-205ENST00000507449 CACNA1AO00555 2505 aa-0.19□□□□□ -2.44
LSM6-205ENST00000507449 SPAARA0A1B0GVQ0 90 aa-0.19□□□□□ -2.44
LSM6-205ENST00000507449 Q8N8P6 123 aa-0.19□□□□□ -2.44
LSM6-205ENST00000507449 PAIP2BQ9ULR5 123 aaKnown RBP-0.19□□□□□ -2.44
LSM6-205ENST00000507449 PCLOQ9Y6V0 5065 aa-0.19□□□□□ -2.44
LSM6-205ENST00000507449 HMCN2Q8NDA2 5059 aa-0.2□□□□□ -2.44
LSM6-205ENST00000507449 STAB1Q9NY15 2570 aa-0.2□□□□□ -2.44
LSM6-205ENST00000507449 TRAV13-2A0A0B4J235 113 aa-0.2□□□□□ -2.44
LSM6-205ENST00000507449 PIN1P1O15428 100 aa-0.2□□□□□ -2.44
LSM6-205ENST00000507449 PPP1R17O96001 155 aa-0.2□□□□□ -2.44
LSM6-205ENST00000507449 SPINK8P0C7L1 97 aa-0.2□□□□□ -2.44
LSM6-205ENST00000507449 CNFNQ9BYD5 112 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms