RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 MUC21A0A0G2JKD1 596 aa8.68□□□□□ -1.02
POLR2J3-212ENST00000507355 MUC21A0A140T8X8 626 aa8.68□□□□□ -1.02
POLR2J3-212ENST00000507355 S100A9P06702 114 aaKnown RBP8.68□□□□□ -1.02
POLR2J3-212ENST00000507355 SSTP61278 116 aa8.68□□□□□ -1.02
POLR2J3-212ENST00000507355 SFT2D1Q8WV19 159 aa8.68□□□□□ -1.02
POLR2J3-212ENST00000507355 CHCHD5Q9BSY4 110 aa8.68□□□□□ -1.02
POLR2J3-212ENST00000507355 SSBP4Q9BWG4 385 aaPredicted RBP8.68□□□□□ -1.02
POLR2J3-212ENST00000507355 USP17L23D6RBM5 183 aa8.67□□□□□ -1.02
POLR2J3-212ENST00000507355 F5H697 171 aa8.67□□□□□ -1.02
POLR2J3-212ENST00000507355 SNAI2O43623 268 aa8.67□□□□□ -1.02
POLR2J3-212ENST00000507355 CXCL1P09341 107 aa8.67□□□□□ -1.02
POLR2J3-212ENST00000507355 HNRNPA3P51991 378 aaKnown RBP8.67□□□□□ -1.02
POLR2J3-212ENST00000507355 RPL37AP61513 92 aaKnown RBP8.67□□□□□ -1.02
POLR2J3-212ENST00000507355 SPANXN1Q5VSR9 72 aa8.67□□□□□ -1.02
POLR2J3-212ENST00000507355 NTM-AS1Q6ZSK4 140 aa8.67□□□□□ -1.02
POLR2J3-212ENST00000507355 BAGE2Q86Y30 109 aa8.67□□□□□ -1.02
POLR2J3-212ENST00000507355 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.67□□□□□ -1.02
POLR2J3-212ENST00000507355 MBD3L1Q8WWY6 194 aa8.67□□□□□ -1.02
POLR2J3-212ENST00000507355 MLST8Q9BVC4 326 aa8.67□□□□□ -1.02
POLR2J3-212ENST00000507355 A0A1B0GV50 99 aa8.66□□□□□ -1.02
POLR2J3-212ENST00000507355 SCO2A0A1W2PP80 73 aa8.66□□□□□ -1.02
POLR2J3-212ENST00000507355 HLA-DQA1P01909 254 aa8.66□□□□□ -1.02
POLR2J3-212ENST00000507355 PRSS1P07477 247 aa8.66□□□□□ -1.02
POLR2J3-212ENST00000507355 FAM213BQ8TBF2 198 aa8.66□□□□□ -1.02
POLR2J3-212ENST00000507355 SMLR1H3BR10 107 aa8.65□□□□□ -1.02
POLR2J3-212ENST00000507355 OR5AL1P0C617 328 aa8.65□□□□□ -1.02
POLR2J3-212ENST00000507355 PKIAP61925 76 aa8.65□□□□□ -1.02
POLR2J3-212ENST00000507355 MIAQ16674 131 aa8.65□□□□□ -1.02
POLR2J3-212ENST00000507355 TMUB2Q71RG4 321 aa8.65□□□□□ -1.02
POLR2J3-212ENST00000507355 VAX2Q9UIW0 290 aa8.65□□□□□ -1.02
POLR2J3-212ENST00000507355 PFDN1O60925 122 aa8.64□□□□□ -1.03
POLR2J3-212ENST00000507355 RBX1P62877 108 aa8.64□□□□□ -1.03
POLR2J3-212ENST00000507355 GAGE6Q13070 117 aa8.64□□□□□ -1.03
POLR2J3-212ENST00000507355 TMEM97Q5BJF2 176 aa8.64□□□□□ -1.03
POLR2J3-212ENST00000507355 DGAT2L7PQ6IED9 249 aa8.64□□□□□ -1.03
POLR2J3-212ENST00000507355 KCNRGQ8N5I3 272 aa8.64□□□□□ -1.03
POLR2J3-212ENST00000507355 C9orf163Q8N9P6 203 aa8.64□□□□□ -1.03
POLR2J3-212ENST00000507355 DERL1Q9BUN8 251 aa8.64□□□□□ -1.03
POLR2J3-212ENST00000507355 KIF25-AS1Q9Y6Z4 181 aa8.64□□□□□ -1.03
POLR2J3-212ENST00000507355 UMAD1C9J7I0 102 aa8.63□□□□□ -1.03
POLR2J3-212ENST00000507355 SMIM17P0DL12 118 aa8.63□□□□□ -1.03
POLR2J3-212ENST00000507355 KRTAP26-1Q6PEX3 210 aa8.63□□□□□ -1.03
POLR2J3-212ENST00000507355 CLPSL2Q6UWE3 100 aa8.63□□□□□ -1.03
POLR2J3-212ENST00000507355 LINC00269Q8N2A0 174 aa8.63□□□□□ -1.03
POLR2J3-212ENST00000507355 DAZAP1Q96EP5 407 aaKnown RBP8.63□□□□□ -1.03
POLR2J3-212ENST00000507355 PRR34Q9NV39 138 aa8.63□□□□□ -1.03
POLR2J3-212ENST00000507355 LRP2P98164 4655 aa8.63□□□□□ -1.03
POLR2J3-212ENST00000507355 TRBV25-1A0A075B6N4 114 aa8.62□□□□□ -1.03
POLR2J3-212ENST00000507355 H2AFB1P0C5Y9 115 aa8.62□□□□□ -1.03
POLR2J3-212ENST00000507355 MT1HL1P0DM35 61 aa8.62□□□□□ -1.03
POLR2J3-212ENST00000507355 TNXBP22105 4242 aa8.61□□□□□ -1.03
POLR2J3-212ENST00000507355 AP1S3Q96PC3 154 aa8.61□□□□□ -1.03
POLR2J3-212ENST00000507355 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.61□□□□□ -1.03
POLR2J3-212ENST00000507355 IGHV1-24A0A0C4DH33 117 aa8.6□□□□□ -1.03
POLR2J3-212ENST00000507355 GZMBP10144 247 aa8.6□□□□□ -1.03
POLR2J3-212ENST00000507355 RPL35P42766 123 aaKnown RBP8.6□□□□□ -1.03
POLR2J3-212ENST00000507355 ZNF345Q14585 488 aa8.6□□□□□ -1.03
POLR2J3-212ENST00000507355 IQCJQ1A5X6 159 aa8.6□□□□□ -1.03
POLR2J3-212ENST00000507355 RGS21Q2M5E4 152 aa8.6□□□□□ -1.03
POLR2J3-212ENST00000507355 SDIM1Q6ZPB5 146 aa8.6□□□□□ -1.03
POLR2J3-212ENST00000507355 IGLV10-54A0A075B6I4 117 aa8.59□□□□□ -1.03
POLR2J3-212ENST00000507355 PANO1I0J062 215 aa8.59□□□□□ -1.03
POLR2J3-212ENST00000507355 M0QY20 66 aa8.59□□□□□ -1.03
POLR2J3-212ENST00000507355 MGPP08493 103 aa8.59□□□□□ -1.03
POLR2J3-212ENST00000507355 REG3AQ06141 175 aa8.59□□□□□ -1.03
POLR2J3-212ENST00000507355 CLRN3Q8NCR9 226 aa8.59□□□□□ -1.03
POLR2J3-212ENST00000507355 TPPP3Q9BW30 176 aa8.59□□□□□ -1.03
POLR2J3-212ENST00000507355 A0A0D9SG52 128 aa8.58□□□□□ -1.04
POLR2J3-212ENST00000507355 KANTRA0A1W2PQU2 76 aa8.58□□□□□ -1.04
POLR2J3-212ENST00000507355 HMSDA8MTL9 139 aa8.58□□□□□ -1.04
POLR2J3-212ENST00000507355 IGLC6P0CF74 106 aa8.58□□□□□ -1.04
POLR2J3-212ENST00000507355 CCL20P78556 96 aa8.58□□□□□ -1.04
POLR2J3-212ENST00000507355 FER1L6-AS1Q8NA97 138 aa8.58□□□□□ -1.04
POLR2J3-212ENST00000507355 C20orf203Q8NBC4 194 aa8.58□□□□□ -1.04
POLR2J3-212ENST00000507355 H7C1H1 209 aa8.57□□□□□ -1.04
POLR2J3-212ENST00000507355 BCL2L11O43521 198 aa8.57□□□□□ -1.04
POLR2J3-212ENST00000507355 NKX2-5P52952 324 aaPredicted RBP8.57□□□□□ -1.04
POLR2J3-212ENST00000507355 SUMO4Q6EEV6 95 aa8.57□□□□□ -1.04
POLR2J3-212ENST00000507355 OR2D3Q8NGH3 330 aa8.57□□□□□ -1.04
POLR2J3-212ENST00000507355 GNG13Q9P2W3 67 aa8.57□□□□□ -1.04
POLR2J3-212ENST00000507355 IGLV4-60A0A075B6I1 120 aa8.56□□□□□ -1.04
POLR2J3-212ENST00000507355 TRAV8-4A0A0B4J246 113 aa8.56□□□□□ -1.04
POLR2J3-212ENST00000507355 RAB19A4D1S5 217 aa8.56□□□□□ -1.04
POLR2J3-212ENST00000507355 P01737 135 aa8.56□□□□□ -1.04
POLR2J3-212ENST00000507355 RAB5CP51148 216 aa8.56□□□□□ -1.04
POLR2J3-212ENST00000507355 RPS20P60866 119 aaKnown RBP8.56□□□□□ -1.04
POLR2J3-212ENST00000507355 CACNG7P62955 275 aa8.56□□□□□ -1.04
POLR2J3-212ENST00000507355 EIF5AP63241 154 aaKnown RBP8.56□□□□□ -1.04
POLR2J3-212ENST00000507355 C11orf52Q96A22 123 aa8.56□□□□□ -1.04
POLR2J3-212ENST00000507355 DPH3Q96FX2 82 aa8.56□□□□□ -1.04
POLR2J3-212ENST00000507355 MANBALQ9NQG1 85 aa8.56□□□□□ -1.04
POLR2J3-212ENST00000507355 A0A1B0GUV1 79 aa8.55□□□□□ -1.04
POLR2J3-212ENST00000507355 hDV102S1A0JD36 115 aa8.55□□□□□ -1.04
POLR2J3-212ENST00000507355 C19orf71A6NCJ1 209 aa8.55□□□□□ -1.04
POLR2J3-212ENST00000507355 CNBPP62633 177 aaKnown RBP8.55□□□□□ -1.04
POLR2J3-212ENST00000507355 CENPWQ5EE01 88 aa8.55□□□□□ -1.04
POLR2J3-212ENST00000507355 RASL11AQ6T310 242 aa8.55□□□□□ -1.04
POLR2J3-212ENST00000507355 TMEM243Q9BU79 118 aa8.55□□□□□ -1.04
POLR2J3-212ENST00000507355 GFRA4Q9GZZ7 299 aa8.55□□□□□ -1.04
POLR2J3-212ENST00000507355 SLPIP03973 132 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms