RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 NEXN-AS1Q8NBZ9 246 aa9.52□□□□□ -0.89
HMGCS1-203ENST00000507004 BAALCQ8WXS3 180 aa9.52□□□□□ -0.89
HMGCS1-203ENST00000507004 DNAJC30Q96LL9 226 aa9.52□□□□□ -0.89
HMGCS1-203ENST00000507004 GNG13Q9P2W3 67 aa9.52□□□□□ -0.89
HMGCS1-203ENST00000507004 VAX2Q9UIW0 290 aa9.52□□□□□ -0.89
HMGCS1-203ENST00000507004 PDE6DO43924 150 aa9.51□□□□□ -0.89
HMGCS1-203ENST00000507004 CCL20P78556 96 aa9.51□□□□□ -0.89
HMGCS1-203ENST00000507004 WFDC2Q14508 124 aa9.51□□□□□ -0.89
HMGCS1-203ENST00000507004 FAT1Q14517 4588 aa9.51□□□□□ -0.89
HMGCS1-203ENST00000507004 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.5□□□□□ -0.89
HMGCS1-203ENST00000507004 F2Z2F3 143 aa9.5□□□□□ -0.89
HMGCS1-203ENST00000507004 LECT2O14960 151 aa9.5□□□□□ -0.89
HMGCS1-203ENST00000507004 MIAQ16674 131 aa9.5□□□□□ -0.89
HMGCS1-203ENST00000507004 CHCHD5Q9BSY4 110 aa9.5□□□□□ -0.89
HMGCS1-203ENST00000507004 TRBV25-1A0A075B6N4 114 aa9.49□□□□□ -0.89
HMGCS1-203ENST00000507004 GNG4P50150 75 aa9.49□□□□□ -0.89
HMGCS1-203ENST00000507004 SULT1A2P50226 295 aa9.49□□□□□ -0.89
HMGCS1-203ENST00000507004 MEF2BQ02080 365 aaPredicted RBP9.49□□□□□ -0.89
HMGCS1-203ENST00000507004 CENPWQ5EE01 88 aa9.49□□□□□ -0.89
HMGCS1-203ENST00000507004 FER1L6-AS1Q8NA97 138 aa9.49□□□□□ -0.89
HMGCS1-203ENST00000507004 FAM30AQ9NZY2 134 aa9.49□□□□□ -0.89
HMGCS1-203ENST00000507004 ANGP03950 147 aaKnown RBP9.48□□□□□ -0.89
HMGCS1-203ENST00000507004 TRGC1P0CF51 173 aa9.48□□□□□ -0.89
HMGCS1-203ENST00000507004 OR2D3Q8NGH3 330 aa9.48□□□□□ -0.89
HMGCS1-203ENST00000507004 KIF25-AS1Q9Y6Z4 181 aa9.48□□□□□ -0.89
HMGCS1-203ENST00000507004 P01737 135 aa9.47□□□□□ -0.89
HMGCS1-203ENST00000507004 IGLC6P0CF74 106 aa9.47□□□□□ -0.89
HMGCS1-203ENST00000507004 SLC51BQ86UW2 128 aa9.47□□□□□ -0.89
HMGCS1-203ENST00000507004 TCTE3Q8IZS6 198 aa9.47□□□□□ -0.89
HMGCS1-203ENST00000507004 C15orf54Q8N8G6 183 aa9.47□□□□□ -0.89
HMGCS1-203ENST00000507004 DERL1Q9BUN8 251 aa9.47□□□□□ -0.89
HMGCS1-203ENST00000507004 DMBT1Q9UGM3 2413 aaPredicted RBP9.47□□□□□ -0.89
HMGCS1-203ENST00000507004 IGHV1-24A0A0C4DH33 117 aa9.46□□□□□ -0.9
HMGCS1-203ENST00000507004 C19orf71A6NCJ1 209 aa9.46□□□□□ -0.9
HMGCS1-203ENST00000507004 IQCJQ1A5X6 159 aa9.46□□□□□ -0.9
HMGCS1-203ENST00000507004 MPV17L2Q567V2 206 aa9.46□□□□□ -0.9
HMGCS1-203ENST00000507004 WDR73Q6P4I2 378 aa9.46□□□□□ -0.9
HMGCS1-203ENST00000507004 ENHOQ6UWT2 76 aa9.46□□□□□ -0.9
HMGCS1-203ENST00000507004 MED9Q9NWA0 146 aa9.46□□□□□ -0.9
HMGCS1-203ENST00000507004 MUC21A0A0G2JKD1 596 aa9.45□□□□□ -0.9
HMGCS1-203ENST00000507004 MUC21A0A140T8X8 626 aa9.45□□□□□ -0.9
HMGCS1-203ENST00000507004 BCL2P10415 239 aa9.45□□□□□ -0.9
HMGCS1-203ENST00000507004 HAMPP81172 84 aa9.45□□□□□ -0.9
HMGCS1-203ENST00000507004 TPPP3Q9BW30 176 aa9.45□□□□□ -0.9
HMGCS1-203ENST00000507004 PRR34Q9NV39 138 aa9.45□□□□□ -0.9
HMGCS1-203ENST00000507004 M0QY20 66 aa9.44□□□□□ -0.9
HMGCS1-203ENST00000507004 IGLV2-8P01709 118 aa9.44□□□□□ -0.9
HMGCS1-203ENST00000507004 MGPP08493 103 aa9.44□□□□□ -0.9
HMGCS1-203ENST00000507004 DGAT2L7PQ6IED9 249 aa9.44□□□□□ -0.9
HMGCS1-203ENST00000507004 LINC00528Q8N1L1 170 aa9.44□□□□□ -0.9
HMGCS1-203ENST00000507004 DEFB104AQ8WTQ1 72 aa9.44□□□□□ -0.9
HMGCS1-203ENST00000507004 CHAC1Q9BUX1 264 aa9.44□□□□□ -0.9
HMGCS1-203ENST00000507004 DPH3P1Q9H4G8 78 aa9.44□□□□□ -0.9
HMGCS1-203ENST00000507004 FLG2Q5D862 2391 aaPredicted RBP9.43□□□□□ -0.9
HMGCS1-203ENST00000507004 TRAV8-4A0A0B4J246 113 aa9.43□□□□□ -0.9
HMGCS1-203ENST00000507004 SSTP61278 116 aa9.43□□□□□ -0.9
HMGCS1-203ENST00000507004 RBX1P62877 108 aa9.43□□□□□ -0.9
HMGCS1-203ENST00000507004 RASL11AQ6T310 242 aa9.43□□□□□ -0.9
HMGCS1-203ENST00000507004 NTM-AS1Q6ZSK4 140 aa9.43□□□□□ -0.9
HMGCS1-203ENST00000507004 C9orf62Q8N4C0 152 aa9.43□□□□□ -0.9
HMGCS1-203ENST00000507004 CLRN3Q8NCR9 226 aa9.43□□□□□ -0.9
HMGCS1-203ENST00000507004 PGLYRP4Q96LB8 373 aa9.43□□□□□ -0.9
HMGCS1-203ENST00000507004 DNAH8Q96JB1 4490 aa9.43□□□□□ -0.9
HMGCS1-203ENST00000507004 A0A1B0GUV1 79 aa9.42□□□□□ -0.9
HMGCS1-203ENST00000507004 RAB19A4D1S5 217 aa9.42□□□□□ -0.9
HMGCS1-203ENST00000507004 GZMBP10144 247 aa9.42□□□□□ -0.9
HMGCS1-203ENST00000507004 SUMO4Q6EEV6 95 aa9.42□□□□□ -0.9
HMGCS1-203ENST00000507004 SCXQ7RTU7 201 aa9.42□□□□□ -0.9
HMGCS1-203ENST00000507004 NIT2Q9NQR4 276 aa9.42□□□□□ -0.9
HMGCS1-203ENST00000507004 USP17L23D6RBM5 183 aa9.41□□□□□ -0.9
HMGCS1-203ENST00000507004 HLA-DQA1P01909 254 aa9.41□□□□□ -0.9
HMGCS1-203ENST00000507004 GAGE6Q13070 117 aa9.41□□□□□ -0.9
HMGCS1-203ENST00000507004 TMEM243Q9BU79 118 aa9.41□□□□□ -0.9
HMGCS1-203ENST00000507004 CNFNQ9BYD5 112 aa9.41□□□□□ -0.9
HMGCS1-203ENST00000507004 J3QL48 77 aa9.4□□□□□ -0.9
HMGCS1-203ENST00000507004 NTF3P20783 257 aa9.4□□□□□ -0.9
HMGCS1-203ENST00000507004 CTRLP40313 264 aa9.4□□□□□ -0.9
HMGCS1-203ENST00000507004 LYZL1Q6UWQ5 148 aa9.4□□□□□ -0.9
HMGCS1-203ENST00000507004 SMIM15Q7Z3B0 74 aa9.4□□□□□ -0.9
HMGCS1-203ENST00000507004 LINC00269Q8N2A0 174 aa9.4□□□□□ -0.9
HMGCS1-203ENST00000507004 VPS13BQ7Z7G8 4022 aa9.39□□□□□ -0.91
HMGCS1-203ENST00000507004 UBE2L6O14933 153 aa9.39□□□□□ -0.91
HMGCS1-203ENST00000507004 NKX2-5P52952 324 aaPredicted RBP9.39□□□□□ -0.91
HMGCS1-203ENST00000507004 REG3AQ06141 175 aa9.39□□□□□ -0.91
HMGCS1-203ENST00000507004 COTL1Q14019 142 aa9.39□□□□□ -0.91
HMGCS1-203ENST00000507004 TEX261Q6UWH6 196 aa9.39□□□□□ -0.91
HMGCS1-203ENST00000507004 NUDT10Q8NFP7 164 aa9.39□□□□□ -0.91
HMGCS1-203ENST00000507004 NUDT11Q96G61 164 aa9.39□□□□□ -0.91
HMGCS1-203ENST00000507004 RPP21Q9H633 154 aaKnown RBP9.39□□□□□ -0.91
HMGCS1-203ENST00000507004 TRBV20OR9-2A0A075B6H5 130 aa9.38□□□□□ -0.91
HMGCS1-203ENST00000507004 TMEM250H0YL14 139 aa9.38□□□□□ -0.91
HMGCS1-203ENST00000507004 BLOC1S1P78537 153 aa9.38□□□□□ -0.91
HMGCS1-203ENST00000507004 LINC01620Q4KN68 170 aa9.38□□□□□ -0.91
HMGCS1-203ENST00000507004 C9orf163Q8N9P6 203 aa9.38□□□□□ -0.91
HMGCS1-203ENST00000507004 CIRBP-AS1Q8TBR5 109 aa9.38□□□□□ -0.91
HMGCS1-203ENST00000507004 KRTAP29-1A8MX34 341 aaPredicted RBP9.37□□□□□ -0.91
HMGCS1-203ENST00000507004 TWIST1Q15672 202 aa9.37□□□□□ -0.91
HMGCS1-203ENST00000507004 FAM210AQ96ND0 272 aa9.37□□□□□ -0.91
HMGCS1-203ENST00000507004 NCR2O95944 276 aa9.36□□□□□ -0.91
HMGCS1-203ENST00000507004 AMTP48728 403 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms