RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 DNAH10OSP0CZ25 163 aa12.35□□□□□ -0.43
NPHP4-210ENST00000506941 ADCYAP1P18509 176 aa12.35□□□□□ -0.43
NPHP4-210ENST00000506941 UQCC3Q6UW78 93 aa12.35□□□□□ -0.43
NPHP4-210ENST00000506941 COMMD7Q86VX2 200 aa12.35□□□□□ -0.43
NPHP4-210ENST00000506941 TRAV8-6A0A0B4J262 113 aa12.34□□□□□ -0.43
NPHP4-210ENST00000506941 C6orf223Q8N319 242 aa12.34□□□□□ -0.43
NPHP4-210ENST00000506941 BORCS7Q96B45 105 aa12.34□□□□□ -0.43
NPHP4-210ENST00000506941 DNAH11Q96DT5 4516 aa12.33□□□□□ -0.44
NPHP4-210ENST00000506941 IGHV3-38A0A0C4DH36 116 aa12.33□□□□□ -0.44
NPHP4-210ENST00000506941 NAT8BQ9UHF3 227 aa12.33□□□□□ -0.44
NPHP4-210ENST00000506941 TRAV26-2A0A0B4J265 109 aa12.32□□□□□ -0.44
NPHP4-210ENST00000506941 TMEM218A2RU14 115 aa12.32□□□□□ -0.44
NPHP4-210ENST00000506941 LINC00862A6NCI5 91 aa12.32□□□□□ -0.44
NPHP4-210ENST00000506941 H7C1H1 209 aa12.32□□□□□ -0.44
NPHP4-210ENST00000506941 PNRC1Q12796 327 aaPredicted RBP12.32□□□□□ -0.44
NPHP4-210ENST00000506941 RASL11AQ6T310 242 aa12.32□□□□□ -0.44
NPHP4-210ENST00000506941 SMIM15Q7Z3B0 74 aa12.32□□□□□ -0.44
NPHP4-210ENST00000506941 Q8N3U1 123 aa12.32□□□□□ -0.44
NPHP4-210ENST00000506941 GATD1Q8NB37 220 aa12.32□□□□□ -0.44
NPHP4-210ENST00000506941 A0A087WWC5 75 aa12.31□□□□□ -0.44
NPHP4-210ENST00000506941 LINC01556Q5JQF7 62 aa12.31□□□□□ -0.44
NPHP4-210ENST00000506941 LINC00336Q6ZUF6 198 aa12.31□□□□□ -0.44
NPHP4-210ENST00000506941 PKHD1P08F94 4074 aa12.31□□□□□ -0.44
NPHP4-210ENST00000506941 DNAJC30Q96LL9 226 aa12.3□□□□□ -0.44
NPHP4-210ENST00000506941 TMEM191AQ9H0A3 160 aa12.3□□□□□ -0.44
NPHP4-210ENST00000506941 TNFRSF18Q9Y5U5 241 aa12.3□□□□□ -0.44
NPHP4-210ENST00000506941 PRSS29PA6NIE9 313 aa12.29□□□□□ -0.44
NPHP4-210ENST00000506941 IGHV3-30P01768 117 aa12.29□□□□□ -0.44
NPHP4-210ENST00000506941 IGHV3-33P01772 117 aa12.29□□□□□ -0.44
NPHP4-210ENST00000506941 IGHV3-30-3P0DP02 117 aa12.29□□□□□ -0.44
NPHP4-210ENST00000506941 IGHV3-30-5P0DP03 117 aa12.29□□□□□ -0.44
NPHP4-210ENST00000506941 RIGQ13278 110 aa12.29□□□□□ -0.44
NPHP4-210ENST00000506941 NIT2Q9NQR4 276 aa12.29□□□□□ -0.44
NPHP4-210ENST00000506941 F8W036 122 aa12.28□□□□□ -0.44
NPHP4-210ENST00000506941 NTM-AS1Q6ZSK4 140 aa12.28□□□□□ -0.44
NPHP4-210ENST00000506941 DAZ4Q86SG3 579 aaKnown RBP12.28□□□□□ -0.44
NPHP4-210ENST00000506941 RPL39LQ96EH5 51 aaKnown RBP12.28□□□□□ -0.44
NPHP4-210ENST00000506941 RNF185Q96GF1 192 aa12.28□□□□□ -0.44
NPHP4-210ENST00000506941 DAZ3Q9NR90 486 aaKnown RBP12.28□□□□□ -0.44
NPHP4-210ENST00000506941 TRAV9-2A0A087WT02 112 aa12.27□□□□□ -0.45
NPHP4-210ENST00000506941 TRBV6-8A0A0A6YYG3 113 aa12.27□□□□□ -0.45
NPHP4-210ENST00000506941 K7EP13 123 aa12.27□□□□□ -0.45
NPHP4-210ENST00000506941 PPP1R2P9O14990 202 aa12.27□□□□□ -0.45
NPHP4-210ENST00000506941 GAS8-AS1O95177 125 aa12.27□□□□□ -0.45
NPHP4-210ENST00000506941 Q6ZRN7 208 aaPredicted RBP12.27□□□□□ -0.45
NPHP4-210ENST00000506941 AMN1Q8IY45 258 aa12.27□□□□□ -0.45
NPHP4-210ENST00000506941 A0A1B0GVY2 172 aa12.26□□□□□ -0.45
NPHP4-210ENST00000506941 MT-ND4LP03901 98 aa12.26□□□□□ -0.45
NPHP4-210ENST00000506941 BTF3P20290 206 aaKnown RBP12.26□□□□□ -0.45
NPHP4-210ENST00000506941 NIT1Q86X76 327 aa12.26□□□□□ -0.45
NPHP4-210ENST00000506941 ANAPC16Q96DE5 110 aa12.26□□□□□ -0.45
NPHP4-210ENST00000506941 SEC11CQ9BY50 192 aa12.26□□□□□ -0.45
NPHP4-210ENST00000506941 RAB4AP20338 218 aa12.25□□□□□ -0.45
NPHP4-210ENST00000506941 TNP2Q05952 138 aa12.25□□□□□ -0.45
NPHP4-210ENST00000506941 MRPL54Q6P161 138 aaKnown RBP12.25□□□□□ -0.45
NPHP4-210ENST00000506941 C10orf126Q8N4M7 172 aa12.25□□□□□ -0.45
NPHP4-210ENST00000506941 FRZBQ92765 325 aa12.25□□□□□ -0.45
NPHP4-210ENST00000506941 A0A1B0GXF2 115 aa12.24□□□□□ -0.45
NPHP4-210ENST00000506941 CAMPP49913 170 aa12.24□□□□□ -0.45
NPHP4-210ENST00000506941 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.24□□□□□ -0.45
NPHP4-210ENST00000506941 DEFB104AQ8WTQ1 72 aa12.24□□□□□ -0.45
NPHP4-210ENST00000506941 BIRC6Q9NR09 4857 aa12.24□□□□□ -0.45
NPHP4-210ENST00000506941 A0A1B0GW15 77 aa12.23□□□□□ -0.45
NPHP4-210ENST00000506941 IBA57-AS1B1ANH7 110 aa12.23□□□□□ -0.45
NPHP4-210ENST00000506941 C10orf91Q5T1B1 145 aa12.23□□□□□ -0.45
NPHP4-210ENST00000506941 RPS10P46783 165 aaKnown RBP12.22□□□□□ -0.45
NPHP4-210ENST00000506941 HBBP68871 147 aa12.22□□□□□ -0.45
NPHP4-210ENST00000506941 TMEM97Q5BJF2 176 aa12.22□□□□□ -0.45
NPHP4-210ENST00000506941 FAM104BQ5XKR9 115 aa12.22□□□□□ -0.45
NPHP4-210ENST00000506941 MRAP2Q96G30 205 aa12.22□□□□□ -0.45
NPHP4-210ENST00000506941 SMKR1H3BMG3 65 aa12.21□□□□□ -0.45
NPHP4-210ENST00000506941 NCR2O95944 276 aa12.21□□□□□ -0.45
NPHP4-210ENST00000506941 IQCJQ1A5X6 159 aa12.21□□□□□ -0.45
NPHP4-210ENST00000506941 DYNC1H1Q14204 4646 aaKnown RBP12.21□□□□□ -0.46
NPHP4-210ENST00000506941 TRBV25-1A0A075B6N4 114 aa12.2□□□□□ -0.46
NPHP4-210ENST00000506941 TRBV6-5A0A0K0K1A5 114 aa12.2□□□□□ -0.46
NPHP4-210ENST00000506941 SDHAF1A6NFY7 115 aa12.2□□□□□ -0.46
NPHP4-210ENST00000506941 MRPL51Q4U2R6 128 aaKnown RBP12.2□□□□□ -0.46
NPHP4-210ENST00000506941 MPV17L2Q567V2 206 aa12.2□□□□□ -0.46
NPHP4-210ENST00000506941 CHCHD5Q9BSY4 110 aa12.2□□□□□ -0.46
NPHP4-210ENST00000506941 CARHSP1Q9Y2V2 147 aaKnown RBP12.2□□□□□ -0.46
NPHP4-210ENST00000506941 URGCP-MRPS24S4R325 110 aa12.2□□□□□ -0.46
NPHP4-210ENST00000506941 IGHV1-24A0A0C4DH33 117 aa12.19□□□□□ -0.46
NPHP4-210ENST00000506941 LAGE3Q14657 143 aa12.19□□□□□ -0.46
NPHP4-210ENST00000506941 KCNIP4Q6PIL6 250 aa12.19□□□□□ -0.46
NPHP4-210ENST00000506941 ATP5L2Q7Z4Y8 100 aa12.19□□□□□ -0.46
NPHP4-210ENST00000506941 NFE4Q86UQ8 179 aa12.19□□□□□ -0.46
NPHP4-210ENST00000506941 CHCHD7Q9BUK0 85 aa12.19□□□□□ -0.46
NPHP4-210ENST00000506941 Q9HAA7 133 aa12.19□□□□□ -0.46
NPHP4-210ENST00000506941 A0A087WX48 190 aa12.18□□□□□ -0.46
NPHP4-210ENST00000506941 TMEM262E9PQX1 116 aa12.18□□□□□ -0.46
NPHP4-210ENST00000506941 GAGE6Q13070 117 aa12.18□□□□□ -0.46
NPHP4-210ENST00000506941 COTL1Q14019 142 aa12.18□□□□□ -0.46
NPHP4-210ENST00000506941 NRACQ8N912 160 aa12.18□□□□□ -0.46
NPHP4-210ENST00000506941 S100A8P05109 93 aa12.17□□□□□ -0.46
NPHP4-210ENST00000506941 ATRAIDQ6UW56 229 aa12.17□□□□□ -0.46
NPHP4-210ENST00000506941 TMEM70Q9BUB7 260 aa12.17□□□□□ -0.46
NPHP4-210ENST00000506941 ST20Q9HBF5 79 aa12.17□□□□□ -0.46
NPHP4-210ENST00000506941 KLK12Q9UKR0 248 aa12.17□□□□□ -0.46
NPHP4-210ENST00000506941 Q8N976 141 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms