RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 CACNG7P62955 275 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 GNG5P63218 68 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 HBBP68871 147 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 FABP9Q0Z7S8 132 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 OR10J3Q5JRS4 329 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 ACTL10Q5JWF8 245 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 FOXI2Q6ZQN5 318 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 NDUFA11Q86Y39 141 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 ZFP82Q8N141 532 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 MTURNQ8N3F0 131 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 RNF182Q8N6D2 247 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 NUP35Q8NFH5 326 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 OR8A1Q8NGG7 326 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 DCANP1Q8TF63 244 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 ZC2HC1AQ96GY0 325 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 PACRGQ96M98 296 aaPredicted RBP1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 HIST1H4GQ99525 98 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 C20orf144Q9BQM9 153 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 GPR61Q9BZJ8 451 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 AGPAT4-IT1Q9H0P7 198 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 LAMTOR2Q9Y2Q5 125 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 KIAA2026Q5HYC2 2103 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 RP1L1Q8IWN7 2480 aaPredicted RBP1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 DSCAML1Q8TD84 2053 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 NBASA2RRP1 2371 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 IGKV3-7A0A075B6H7 116 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 IGKV2-40A0A087WW87 121 aaPredicted RBP1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 IGHV3-74A0A0B4J1X5 117 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 TRAV8-2A0A0B4J237 113 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 LINC01549A6NIU2 74 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 ZNF705FA8MVS1 300 aaPredicted RBP1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 K7EMI3 77 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 HIST1H2BKO60814 126 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 SH2D1AO60880 128 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 IGKV2D-40P01614 121 aaPredicted RBP1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 HIST1H2BJP06899 126 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 OR5AL1P0C617 328 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 ZNF688P0C7X2 276 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 TRGC1P0CF51 173 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 SMIM17P0DL12 118 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 CD28P10747 220 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 PMCHP20382 165 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 HIST1H2BOP23527 126 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 HIST1H2BBP33778 126 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 RNASE4P34096 147 aaKnown RBP1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 ASIPP42127 132 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 CDKN1BP46527 198 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 TFPI2P48307 235 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 CRIP1P50238 77 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 TCL1AP56279 114 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 HIST1H2BDP58876 126 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 HIST1H2BCP62807 126 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 Q0VG73 95 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 HIST2H2BEQ16778 126 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 DEFB114Q30KQ6 69 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 TDRG1Q3Y452 100 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 PSMG4Q5JS54 123 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 COA6Q5JTJ3 125 aaKnown RBP1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 DNLZQ5SXM8 178 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 SPANXN1Q5VSR9 72 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 MRPL54Q6P161 138 aaKnown RBP1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 C10orf99Q6UWK7 81 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 ZNF493Q6ZR52 646 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 TMEM136Q6ZRR5 245 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 BAGE3Q86Y29 109 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 APRG1Q8IVJ8 170 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 FER1L6-AS1Q8NA97 138 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 HIST1H2BHQ93079 126 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 CHCHD1Q96BP2 118 aaKnown RBP1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 RNF185Q96GF1 192 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 FAM19A4Q96LR4 140 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 HIST1H2BNQ99877 126 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 HIST1H2BMQ99879 126 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 SMR3AQ99954 134 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 CNFNQ9BYD5 112 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 NAGKQ9UJ70 344 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 PHLDA3Q9Y5J5 127 aa1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 YLPM1P49750 1951 aaKnown RBP1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 MAP1AP78559 2803 aaPredicted RBP1.57□□□□□ -2.16
TOPBP1-205ENST00000506779 PLCE1Q9P212 2302 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 LOC102724200A0A096LPH7 203 aaPredicted RBP1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 TRAV12-3A0A0B4J271 114 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 A0A0J9YX75 114 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 LOC105371267A0A1B0GV96 52 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 A0A1B0GXF2 115 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 C7orf71A4D174 169 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 OR11H12B2RN74 326 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 TCAPO15273 167 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 SPINK4O60575 86 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 HSBP1O75506 76 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 IGLV1-51P01701 117 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 CD7P09564 240 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 ARMS2P0C7Q2 107 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 LINC00614P0C842 121 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 IGLC6P0CF74 106 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 SMIM6P0DI80 62 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 ESDP10768 282 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 HLA-DRB4P13762 266 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 NTF3P20783 257 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms