RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 LITAFQ99732 161 aa4.32□□□□□ -1.72
SMAD5-201ENST00000506223 ZNF471Q9BX82 626 aaPredicted RBP4.32□□□□□ -1.72
SMAD5-201ENST00000506223 MAP1LC3BQ9GZQ8 125 aa4.32□□□□□ -1.72
SMAD5-201ENST00000506223 PYGO1Q9Y3Y4 419 aa4.32□□□□□ -1.72
SMAD5-201ENST00000506223 A0A1B0GV50 99 aa4.31□□□□□ -1.72
SMAD5-201ENST00000506223 FABP5P3A8MUU1 101 aa4.31□□□□□ -1.72
SMAD5-201ENST00000506223 B4DEV8 164 aa4.31□□□□□ -1.72
SMAD5-201ENST00000506223 M0R036 132 aa4.31□□□□□ -1.72
SMAD5-201ENST00000506223 AKR1C3P42330 323 aa4.31□□□□□ -1.72
SMAD5-201ENST00000506223 XGP55808 180 aa4.31□□□□□ -1.72
SMAD5-201ENST00000506223 HERV-K104P63124 156 aa4.31□□□□□ -1.72
SMAD5-201ENST00000506223 ADAMTSL4-AS1Q5T5F5 129 aa4.31□□□□□ -1.72
SMAD5-201ENST00000506223 LYPD5Q6UWN5 251 aa4.31□□□□□ -1.72
SMAD5-201ENST00000506223 NOTCH2NLQ7Z3S9 236 aa4.31□□□□□ -1.72
SMAD5-201ENST00000506223 C10orf126Q8N4M7 172 aa4.31□□□□□ -1.72
SMAD5-201ENST00000506223 FAM213BQ8TBF2 198 aa4.31□□□□□ -1.72
SMAD5-201ENST00000506223 C2orf48Q96LS8 159 aa4.31□□□□□ -1.72
SMAD5-201ENST00000506223 KRTAP1-5Q9BYS1 174 aa4.31□□□□□ -1.72
SMAD5-201ENST00000506223 ARL2-SNX15V9GYD0 113 aa4.31□□□□□ -1.72
SMAD5-201ENST00000506223 A0A0D9SG52 128 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 FAM74A7A6NL05 159 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 A8MWV9 139 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 UMAD1C9J7I0 102 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 F8WDY8 70 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 SMLR1H3BR10 107 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 TEX46H3BTG2 121 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 K7EP13 123 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 CRYGDP07320 174 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 MGST1P10620 155 aaKnown RBP4.3□□□□□ -1.72
SMAD5-201ENST00000506223 TPT1P13693 172 aaKnown RBP4.3□□□□□ -1.72
SMAD5-201ENST00000506223 ZNF345Q14585 488 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 FAM162BQ5T6X4 162 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 FAM74A4Q5TZK3 123 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 KCNIP4Q6PIL6 250 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 Q86TA4 180 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 WFDC10BQ8IUB3 73 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 SFT2D1Q8WV19 159 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 TVP23CQ96ET8 276 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 FMC1Q96HJ9 113 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 TCEAL7Q9BRU2 100 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 ZFP30Q9Y2G7 519 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 PHLDA3Q9Y5J5 127 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 URGCP-MRPS24S4R325 110 aa4.3□□□□□ -1.72
SMAD5-201ENST00000506223 A0A087WZ39 114 aa4.29□□□□□ -1.72
SMAD5-201ENST00000506223 A0A087X002 238 aa4.29□□□□□ -1.72
SMAD5-201ENST00000506223 TMSB15BA0A087X1C1 80 aa4.29□□□□□ -1.72
SMAD5-201ENST00000506223 IGHV3-38A0A0C4DH36 116 aa4.29□□□□□ -1.72
SMAD5-201ENST00000506223 LOC100131303A0A0U1RQF7 123 aa4.29□□□□□ -1.72
SMAD5-201ENST00000506223 TRBV6-4A0A1B0GX49 114 aa4.29□□□□□ -1.72
SMAD5-201ENST00000506223 H3BVH4 76 aa4.29□□□□□ -1.72
SMAD5-201ENST00000506223 GATA1P15976 413 aaPredicted RBP4.29□□□□□ -1.72
SMAD5-201ENST00000506223 ZNF80P51504 273 aaPredicted RBP4.29□□□□□ -1.72
SMAD5-201ENST00000506223 ZNF726P1Q15940 193 aa4.29□□□□□ -1.72
SMAD5-201ENST00000506223 ZNF506Q5JVG8 444 aa4.29□□□□□ -1.72
SMAD5-201ENST00000506223 CFAP126Q5VTH2 177 aa4.29□□□□□ -1.72
SMAD5-201ENST00000506223 EIF5AL1Q6IS14 154 aaKnown RBP4.29□□□□□ -1.72
SMAD5-201ENST00000506223 SLC25A29Q8N8R3 303 aa4.29□□□□□ -1.72
SMAD5-201ENST00000506223 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.29□□□□□ -1.72
SMAD5-201ENST00000506223 SUN5Q8TC36 379 aa4.29□□□□□ -1.72
SMAD5-201ENST00000506223 FRZBQ92765 325 aa4.29□□□□□ -1.72
SMAD5-201ENST00000506223 LINC00479Q96M42 142 aa4.29□□□□□ -1.72
SMAD5-201ENST00000506223 LRP1Q07954 4544 aaKnown RBP4.29□□□□□ -1.72
SMAD5-201ENST00000506223 GRIFINA4D1Z8 144 aa4.28□□□□□ -1.72
SMAD5-201ENST00000506223 M0R381 172 aa4.28□□□□□ -1.72
SMAD5-201ENST00000506223 RS1O15537 224 aa4.28□□□□□ -1.72
SMAD5-201ENST00000506223 BCL2L11O43521 198 aa4.28□□□□□ -1.72
SMAD5-201ENST00000506223 SH2D1AO60880 128 aa4.28□□□□□ -1.72
SMAD5-201ENST00000506223 S100A9P06702 114 aaKnown RBP4.28□□□□□ -1.72
SMAD5-201ENST00000506223 SEC11BP0C7V7 166 aa4.28□□□□□ -1.72
SMAD5-201ENST00000506223 DPPA3Q6W0C5 159 aa4.28□□□□□ -1.72
SMAD5-201ENST00000506223 KCNRGQ8N5I3 272 aa4.28□□□□□ -1.72
SMAD5-201ENST00000506223 ATP6V0E2Q8NHE4 81 aa4.28□□□□□ -1.72
SMAD5-201ENST00000506223 C9orf85Q96MD7 179 aa4.28□□□□□ -1.72
SMAD5-201ENST00000506223 FAM218AQ96MZ4 157 aa4.28□□□□□ -1.72
SMAD5-201ENST00000506223 Q9HAA7 133 aa4.28□□□□□ -1.72
SMAD5-201ENST00000506223 HMSDA8MTL9 139 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 IGHV3-30P01768 117 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 IGHV3-33P01772 117 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 SMR3BP02814 79 aaPredicted RBP4.27□□□□□ -1.73
SMAD5-201ENST00000506223 ARMS2P0C7Q2 107 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 DNAH10OSP0CZ25 163 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 SMIM17P0DL12 118 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 IGHV3-30-3P0DP02 117 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 IGHV3-30-5P0DP03 117 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 RNASE3P12724 160 aaKnown RBP4.27□□□□□ -1.73
SMAD5-201ENST00000506223 FHITP49789 147 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 ZFP2Q6ZN57 461 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 ZFP82Q8N141 532 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 ZC2HC1AQ96GY0 325 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 KRTAP9-8Q9BYQ0 159 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 GTSF1LQ9H1H1 148 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 PARLQ9H300 379 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 CYTL1Q9NRR1 136 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 IL36BQ9NZH7 164 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 GNG13Q9P2W3 67 aa4.27□□□□□ -1.73
SMAD5-201ENST00000506223 FAT3Q8TDW7 4589 aa4.26□□□□□ -1.73
SMAD5-201ENST00000506223 A0A087WWC5 75 aa4.26□□□□□ -1.73
SMAD5-201ENST00000506223 IGKV3D-20A0A0C4DH25 116 aa4.26□□□□□ -1.73
SMAD5-201ENST00000506223 KRBOX1C9JBD0 128 aa4.26□□□□□ -1.73
SMAD5-201ENST00000506223 LTAP01374 205 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms