RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 TRAV34A0A0B4J273 112 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 IGHV3-16A0A0C4DH30 117 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 TRBV6-1A0A0K0K1D8 114 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 LOC100131303A0A0U1RQF7 123 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 FABP5P3A8MUU1 101 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 A8MWV9 139 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 M0R381 172 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 LCE2BO14633 110 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 CIDEAO60543 219 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 SH2D1AO60880 128 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 LTAP01374 205 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 P01737 135 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 PRSS1P07477 247 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 KRTAP1-4P0C5Y4 121 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 SFTA3P0C7M3 94 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 SMIM17P0DL12 118 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 SULT1A2P50226 295 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 BLOC1S1P78537 153 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 ZNF56Q15929 161 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 LINC01559Q495D7 138 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 ASB16-AS1Q495Z4 193 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 ZNF876PQ49A33 203 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 CENPWQ5EE01 88 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 ZNF506Q5JVG8 444 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 FAM74A4Q5TZK3 123 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 SPANXN1Q5VSR9 72 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 ATRAIDQ6UW56 229 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 Q6ZNX1 250 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 ATP6V0E2Q8NHE4 81 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 SUN5Q8TC36 379 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 C11orf52Q96A22 123 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 BORCS7Q96B45 105 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 SMIM12Q96EX1 92 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 RNF185Q96GF1 192 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 ZC2HC1AQ96GY0 325 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 TPPP3Q9BW30 176 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 CYTL1Q9NRR1 136 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 TP53TG3Q9ULZ0 132 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 HHLA3Q9XRX5 114 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
TCOF1-208ENST00000506063 TRAV8-3A0A0A6YYJ7 113 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 TRAV1-1A0A0B4J248 108 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 TRAV8-6A0A0B4J262 113 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 CXCL1P09341 107 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 TRGC1P0CF51 173 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 GATA1P15976 413 aaPredicted RBP1.98□□□□□ -2.09
TCOF1-208ENST00000506063 RPL35P42766 123 aaKnown RBP1.98□□□□□ -2.09
TCOF1-208ENST00000506063 CEBPGP53567 150 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 RPS20P60866 119 aaKnown RBP1.98□□□□□ -2.09
TCOF1-208ENST00000506063 PKIAP61925 76 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 CACNG7P62955 275 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 ZNF674Q2M3X9 581 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 OR10J3Q5JRS4 329 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 TOR2AQ5JU69 321 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 PIK3CD-AS1Q5SR53 167 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 DGAT2L7PQ6IED9 249 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 ALKAL2Q6UX46 152 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 SMIM15Q7Z3B0 74 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 DAZ4Q86SG3 579 aaKnown RBP1.98□□□□□ -2.09
TCOF1-208ENST00000506063 BAGE2Q86Y30 109 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 C9orf62Q8N4C0 152 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 C7orf33Q8WU49 177 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 MBD3L1Q8WWY6 194 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 RASL10AQ92737 203 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 C9orf85Q96MD7 179 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 PARLQ9H300 379 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 DAZ3Q9NR90 486 aaKnown RBP1.98□□□□□ -2.09
TCOF1-208ENST00000506063 MED9Q9NWA0 146 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 IL36BQ9NZH7 164 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 URGCP-MRPS24S4R325 110 aa1.98□□□□□ -2.09
TCOF1-208ENST00000506063 A0A087WWC5 75 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 IGHV3-73A0A0B4J1V6 119 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 TRBV6-4A0A1B0GX49 114 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 GRIFINA4D1Z8 144 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 KRBOX1C9JBD0 128 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 TMEM250H0YL14 139 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 CRPP02741 224 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 SLPIP03973 132 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 MGPP08493 103 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 RNASE3P12724 160 aaKnown RBP1.97□□□□□ -2.09
TCOF1-208ENST00000506063 ZNF80P51504 273 aaPredicted RBP1.97□□□□□ -2.09
TCOF1-208ENST00000506063 NKX2-5P52952 324 aaPredicted RBP1.97□□□□□ -2.09
TCOF1-208ENST00000506063 CCL20P78556 96 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 RPL36AP83881 106 aaKnown RBP1.97□□□□□ -2.09
TCOF1-208ENST00000506063 CFAP126Q5VTH2 177 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 ZFP2Q6ZN57 461 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 Q6ZQT7 251 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 FER1L6-AS1Q8NA97 138 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 OR2D3Q8NGH3 330 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 RPL36ALQ969Q0 106 aaKnown RBP1.97□□□□□ -2.09
TCOF1-208ENST00000506063 PTH2Q96A98 100 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 RMI2Q96E14 147 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 TVP23CQ96ET8 276 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 ZNF479Q96JC4 524 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 LINC00479Q96M42 142 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 SMIM7Q9BQ49 75 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 DERL1Q9BUN8 251 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 EIF5A2Q9GZV4 153 aaKnown RBP1.97□□□□□ -2.09
TCOF1-208ENST00000506063 CDIP1Q9H305 208 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 RPP21Q9H633 154 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms