RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 ANKRD17O75179 2603 aaKnown RBP5.62□□□□□ -1.51
PPARGC1A-204ENST00000506055 TMEM89A2RUT3 159 aa5.62□□□□□ -1.51
PPARGC1A-204ENST00000506055 P0DMU3 169 aa5.62□□□□□ -1.51
PPARGC1A-204ENST00000506055 FAM231AP0DMU4 169 aa5.62□□□□□ -1.51
PPARGC1A-204ENST00000506055 FAM231CP0DMU5 169 aa5.62□□□□□ -1.51
PPARGC1A-204ENST00000506055 C18orf65Q6ZTR6 163 aa5.62□□□□□ -1.51
PPARGC1A-204ENST00000506055 I3L3M4 83 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 J3QQQ9 107 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 RBMY1A1P0DJD3 496 aaKnown RBP5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 RBMY1CP0DJD4 496 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 PSMB2P49721 201 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 SLURP1P55000 103 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 PROK1P58294 105 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 RBMY1FQ15415 496 aaKnown RBP5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 UBE2E2Q96LR5 201 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 TEX15Q9BXT5 2789 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 TSPAN13O95857 204 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 PRB1P04280 392 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 LGALS3P17931 250 aaKnown RBP5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 UBE2D1P51668 147 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 DEFB131AP59861 70 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 HIST2H2BDQ6DRA6 164 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 DUX3Q96PT4 197 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 ZNF702PQ9H963 129 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 EPG5Q9HCE0 2579 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 CREBBPQ92793 2442 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 TRGV11A0A075B6L2 103 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 J3QLI3 93 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 ELANEP08246 267 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 INSL3P51460 131 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 NSUN5P1Q3KNT7 163 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 Q6YL49 198 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 NDUFA11Q86Y39 141 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 SLC25A29Q8N8R3 303 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 C20orf203Q8NBC4 194 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 VCX2Q9H322 139 aa5.61□□□□□ -1.51
PPARGC1A-204ENST00000506055 A0A096LNT2 108 aa5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 A0A0J9YXV3 536 aa5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 IGHV3-30P01768 117 aa5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 CFC1BP0CG36 223 aa5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 CFC1P0CG37 223 aa5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 IGHV3-30-5P0DP03 117 aa5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 RHOHQ15669 191 aa5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 ZNF418Q8TF45 676 aaPredicted RBP5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 SPAG8Q99932 426 aaPredicted RBP5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 GTSF1LQ9H1H1 148 aa5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 PRO0461Q9UI25 63 aa5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 TSSC4Q9Y5U2 329 aaPredicted RBP5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 J3QR89 54 aa5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 KHDC1LQ5JSQ8 128 aa5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 CEMP1Q6PRD7 247 aaPredicted RBP5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 DLX4Q92988 240 aaPredicted RBP5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 AMELXQ99217 191 aa5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 Q9UF83 564 aa5.6□□□□□ -1.51
PPARGC1A-204ENST00000506055 TMEM223A0PJW6 202 aa5.59□□□□□ -1.51
PPARGC1A-204ENST00000506055 RNASE13Q5GAN3 156 aaKnown RBP5.59□□□□□ -1.51
PPARGC1A-204ENST00000506055 NFE4Q86UQ8 179 aa5.59□□□□□ -1.51
PPARGC1A-204ENST00000506055 SPXQ9BT56 116 aa5.59□□□□□ -1.51
PPARGC1A-204ENST00000506055 FAM208BQ5VWN6 2430 aa5.59□□□□□ -1.51
PPARGC1A-204ENST00000506055 IGLV4-3A0A075B6K6 122 aa5.59□□□□□ -1.52
PPARGC1A-204ENST00000506055 GAGE12HA6NDE8 117 aa5.59□□□□□ -1.52
PPARGC1A-204ENST00000506055 RHODO00212 210 aa5.59□□□□□ -1.52
PPARGC1A-204ENST00000506055 RAX2Q96IS3 184 aa5.59□□□□□ -1.52
PPARGC1A-204ENST00000506055 TNFRSF18Q9Y5U5 241 aa5.59□□□□□ -1.52
PPARGC1A-204ENST00000506055 TRAV2A0A0B4J234 112 aa5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 ADARB2-AS1A8MUL3 147 aa5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 H3BMM0 161 aa5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 LEPROTO15243 131 aa5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 SCGB1C2P0DMR2 95 aa5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 IGHV4-31P0DP07 118 aa5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 AZU1P20160 251 aa5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 SIGMAR1Q99720 223 aa5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 TMEM238C9JI98 176 aa5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 H7C2G1 150 aa5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 CD28P10747 220 aa5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 ZNF22P17026 224 aaPredicted RBP5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 SMCPP49901 116 aaPredicted RBP5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 KRTAP10-9P60411 292 aa5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 SMAGPQ0VAQ4 97 aa5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 CFAP126Q5VTH2 177 aa5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 Q6ZSN1 163 aa5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 TMEM61Q8N0U2 210 aa5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 PRO1854Q9UHT4 67 aa5.58□□□□□ -1.52
PPARGC1A-204ENST00000506055 ZFYVE26Q68DK2 2539 aa5.57□□□□□ -1.52
PPARGC1A-204ENST00000506055 A4D1N5 150 aa5.57□□□□□ -1.52
PPARGC1A-204ENST00000506055 RBMY1BA6NDE4 496 aaKnown RBP5.57□□□□□ -1.52
PPARGC1A-204ENST00000506055 RBMY1EA6NEQ0 496 aaKnown RBP5.57□□□□□ -1.52
PPARGC1A-204ENST00000506055 RBMY1DP0C7P1 496 aaKnown RBP5.57□□□□□ -1.52
PPARGC1A-204ENST00000506055 UBE2D3P61077 147 aa5.57□□□□□ -1.52
PPARGC1A-204ENST00000506055 UBE2D2P62837 147 aa5.57□□□□□ -1.52
PPARGC1A-204ENST00000506055 PTH2Q96A98 100 aa5.57□□□□□ -1.52
PPARGC1A-204ENST00000506055 LRRK2Q5S007 2527 aa5.57□□□□□ -1.52
PPARGC1A-204ENST00000506055 ZNF469Q96JG9 3925 aaPredicted RBP5.57□□□□□ -1.52
PPARGC1A-204ENST00000506055 ZNF462Q96JM2 2506 aa5.57□□□□□ -1.52
PPARGC1A-204ENST00000506055 M0R2P5 195 aa5.57□□□□□ -1.52
PPARGC1A-204ENST00000506055 TCL1BO95988 128 aa5.57□□□□□ -1.52
PPARGC1A-204ENST00000506055 C10orf126Q8N4M7 172 aa5.57□□□□□ -1.52
PPARGC1A-204ENST00000506055 RNF152Q8N8N0 203 aa5.57□□□□□ -1.52
PPARGC1A-204ENST00000506055 LINC01587Q99440 93 aa5.57□□□□□ -1.52
PPARGC1A-204ENST00000506055 TRAV8-3A0A0A6YYJ7 113 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms