RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 VSIG2Q96IQ7 327 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 URGCP-MRPS24S4R325 110 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 KRTAP4-8A0A0G2JLE6 195 aa4.73□□□□□ -1.65
NR1I3-221ENST00000505944 XKRY2A2RUG3 117 aa4.73□□□□□ -1.65
NR1I3-221ENST00000505944 A8MWL6 223 aa4.73□□□□□ -1.65
NR1I3-221ENST00000505944 NXPH4O95158 308 aa4.73□□□□□ -1.65
NR1I3-221ENST00000505944 GAS8-AS1O95177 125 aa4.73□□□□□ -1.65
NR1I3-221ENST00000505944 CRYGDP07320 174 aa4.73□□□□□ -1.65
NR1I3-221ENST00000505944 OR5AL1P0C617 328 aa4.73□□□□□ -1.65
NR1I3-221ENST00000505944 INAFM2P0DMQ5 153 aa4.73□□□□□ -1.65
NR1I3-221ENST00000505944 NTF3P20783 257 aa4.73□□□□□ -1.65
NR1I3-221ENST00000505944 CCL18P55774 89 aa4.73□□□□□ -1.65
NR1I3-221ENST00000505944 ZNF56Q15929 161 aa4.73□□□□□ -1.65
NR1I3-221ENST00000505944 DNLZQ5SXM8 178 aa4.73□□□□□ -1.65
NR1I3-221ENST00000505944 UFSP1Q6NVU6 142 aa4.73□□□□□ -1.65
NR1I3-221ENST00000505944 SYT8Q8NBV8 401 aa4.73□□□□□ -1.65
NR1I3-221ENST00000505944 SEC11CQ9BY50 192 aa4.73□□□□□ -1.65
NR1I3-221ENST00000505944 RPS10P5Q9NQ39 176 aa4.73□□□□□ -1.65
NR1I3-221ENST00000505944 CARHSP1Q9Y2V2 147 aaKnown RBP4.73□□□□□ -1.65
NR1I3-221ENST00000505944 SRRM2Q9UQ35 2752 aaKnown RBP4.73□□□□□ -1.65
NR1I3-221ENST00000505944 A0A1W2PPQ1 181 aa4.72□□□□□ -1.65
NR1I3-221ENST00000505944 C7orf77A4D0Y5 90 aa4.72□□□□□ -1.65
NR1I3-221ENST00000505944 GAGE12JA6NER3 117 aa4.72□□□□□ -1.65
NR1I3-221ENST00000505944 F5H697 171 aa4.72□□□□□ -1.65
NR1I3-221ENST00000505944 SMKR1H3BMG3 65 aa4.72□□□□□ -1.65
NR1I3-221ENST00000505944 CXCL1P09341 107 aa4.72□□□□□ -1.65
NR1I3-221ENST00000505944 GYPEP15421 78 aa4.72□□□□□ -1.65
NR1I3-221ENST00000505944 GATA1P15976 413 aaPredicted RBP4.72□□□□□ -1.65
NR1I3-221ENST00000505944 CAMPP49913 170 aa4.72□□□□□ -1.65
NR1I3-221ENST00000505944 GAGE1Q13065 139 aa4.72□□□□□ -1.65
NR1I3-221ENST00000505944 GAGE4Q13068 117 aa4.72□□□□□ -1.65
NR1I3-221ENST00000505944 GAGE5Q13069 117 aa4.72□□□□□ -1.65
NR1I3-221ENST00000505944 GAGE13Q4V321 117 aa4.72□□□□□ -1.65
NR1I3-221ENST00000505944 CT83Q5H943 113 aa4.72□□□□□ -1.65
NR1I3-221ENST00000505944 SPATA12Q7Z6I5 190 aa4.72□□□□□ -1.65
NR1I3-221ENST00000505944 SLC25A29Q8N8R3 303 aa4.72□□□□□ -1.65
NR1I3-221ENST00000505944 FRZBQ92765 325 aa4.72□□□□□ -1.65
NR1I3-221ENST00000505944 CDIP1Q9H305 208 aa4.72□□□□□ -1.65
NR1I3-221ENST00000505944 IGHV3-38A0A0C4DH36 116 aa4.71□□□□□ -1.66
NR1I3-221ENST00000505944 A0A1B0GUT8 65 aa4.71□□□□□ -1.66
NR1I3-221ENST00000505944 SMIM27A0A1W2PRY6 76 aa4.71□□□□□ -1.66
NR1I3-221ENST00000505944 SCO1O75880 301 aa4.71□□□□□ -1.66
NR1I3-221ENST00000505944 NCR2O95944 276 aa4.71□□□□□ -1.66
NR1I3-221ENST00000505944 MT-ND4LP03901 98 aa4.71□□□□□ -1.66
NR1I3-221ENST00000505944 CRYBA4P53673 196 aa4.71□□□□□ -1.66
NR1I3-221ENST00000505944 LINC00315P59091 139 aa4.71□□□□□ -1.66
NR1I3-221ENST00000505944 CACNG7P62955 275 aa4.71□□□□□ -1.66
NR1I3-221ENST00000505944 PNRC1Q12796 327 aaPredicted RBP4.71□□□□□ -1.66
NR1I3-221ENST00000505944 C10orf91Q5T1B1 145 aa4.71□□□□□ -1.66
NR1I3-221ENST00000505944 SUMO4Q6EEV6 95 aa4.71□□□□□ -1.66
NR1I3-221ENST00000505944 NEGR1Q7Z3B1 354 aa4.71□□□□□ -1.66
NR1I3-221ENST00000505944 CBLN2Q8IUK8 224 aa4.71□□□□□ -1.66
NR1I3-221ENST00000505944 ZNRF2Q8NHG8 242 aa4.71□□□□□ -1.66
NR1I3-221ENST00000505944 RPL39LQ96EH5 51 aaKnown RBP4.71□□□□□ -1.66
NR1I3-221ENST00000505944 AP1S3Q96PC3 154 aa4.71□□□□□ -1.66
NR1I3-221ENST00000505944 HHLA3Q9XRX5 114 aa4.71□□□□□ -1.66
NR1I3-221ENST00000505944 FAT1Q14517 4588 aa4.71□□□□□ -1.66
NR1I3-221ENST00000505944 A8MWV9 139 aa4.7□□□□□ -1.66
NR1I3-221ENST00000505944 K7EQD1 137 aa4.7□□□□□ -1.66
NR1I3-221ENST00000505944 SMIM17P0DL12 118 aa4.7□□□□□ -1.66
NR1I3-221ENST00000505944 RAB4BP61018 213 aa4.7□□□□□ -1.66
NR1I3-221ENST00000505944 AMN1Q8IY45 258 aa4.7□□□□□ -1.66
NR1I3-221ENST00000505944 BORCS7Q96B45 105 aa4.7□□□□□ -1.66
NR1I3-221ENST00000505944 NAT8BQ9UHF3 227 aa4.7□□□□□ -1.66
NR1I3-221ENST00000505944 KIF25-AS1Q9Y6Z4 181 aa4.7□□□□□ -1.66
NR1I3-221ENST00000505944 TGIF2-C20orf24A0A0A6YYL0 155 aa4.69□□□□□ -1.66
NR1I3-221ENST00000505944 F2Z2F3 143 aa4.69□□□□□ -1.66
NR1I3-221ENST00000505944 RPS10P46783 165 aaKnown RBP4.69□□□□□ -1.66
NR1I3-221ENST00000505944 NDUFA5Q16718 116 aa4.69□□□□□ -1.66
NR1I3-221ENST00000505944 PTH2Q96A98 100 aa4.69□□□□□ -1.66
NR1I3-221ENST00000505944 RNF185Q96GF1 192 aa4.69□□□□□ -1.66
NR1I3-221ENST00000505944 C18orf15Q96N68 181 aa4.69□□□□□ -1.66
NR1I3-221ENST00000505944 GFRA4Q9GZZ7 299 aa4.69□□□□□ -1.66
NR1I3-221ENST00000505944 PRO0255Q9UI72 69 aa4.69□□□□□ -1.66
NR1I3-221ENST00000505944 VPS13BQ7Z7G8 4022 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 MYCBP2O75592 4640 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 A0A1B0GXF2 115 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 RHODO00212 210 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 PPP1R2P9O14990 202 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 ATP6V1G1O75348 118 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 SNAPINO95295 136 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 TRGC1P0CF51 173 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 SRIP30626 198 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 RIGQ13278 110 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 RHEBQ15382 184 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 ESRGQ1W209 222 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 SVBPQ8N300 66 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 GATD1Q8NB37 220 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 NEXN-AS1Q8NBZ9 246 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 IMMP2LQ96T52 175 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 CNFNQ9BYD5 112 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 DPH3P1Q9H4G8 78 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 PLA2G2DQ9UNK4 145 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 ICOSQ9Y6W8 199 aa4.68□□□□□ -1.66
NR1I3-221ENST00000505944 M0QY20 66 aa4.67□□□□□ -1.66
NR1I3-221ENST00000505944 RAB4AP20338 218 aa4.67□□□□□ -1.66
NR1I3-221ENST00000505944 HBBP68871 147 aa4.67□□□□□ -1.66
NR1I3-221ENST00000505944 RHOHQ15669 191 aa4.67□□□□□ -1.66
NR1I3-221ENST00000505944 KIAA1644Q3SXP7 199 aa4.67□□□□□ -1.66
NR1I3-221ENST00000505944 MRPL51Q4U2R6 128 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms