RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 ARAP1Q96P48 1450 aa-1.02□□□□□ -2.57
SMN2-205ENST00000505346 CNFNQ9BYD5 112 aa-1.02□□□□□ -2.57
SMN2-205ENST00000505346 TAS2R8Q9NYW2 309 aa-1.02□□□□□ -2.57
SMN2-205ENST00000505346 MED23Q9ULK4 1368 aa-1.02□□□□□ -2.57
SMN2-205ENST00000505346 PGRMC1O00264 195 aaKnown RBP-1.03□□□□□ -2.57
SMN2-205ENST00000505346 FAM107AO95990 144 aa-1.03□□□□□ -2.57
SMN2-205ENST00000505346 G0S2P27469 103 aa-1.03□□□□□ -2.57
SMN2-205ENST00000505346 KRTAP6-2Q3LI66 62 aa-1.03□□□□□ -2.57
SMN2-205ENST00000505346 SNX29P2Q8IUI4 249 aa-1.03□□□□□ -2.57
SMN2-205ENST00000505346 V9GYV3 84 aa-1.03□□□□□ -2.57
SMN2-205ENST00000505346 MUC17Q685J3 4493 aa-1.03□□□□□ -2.57
SMN2-205ENST00000505346 USF3Q68DE3 2245 aa-1.04□□□□□ -2.58
SMN2-205ENST00000505346 E7EQ34 232 aa-1.04□□□□□ -2.58
SMN2-205ENST00000505346 HIST1H1BP16401 226 aaKnown RBP-1.04□□□□□ -2.58
SMN2-205ENST00000505346 PSPHP78330 225 aa-1.04□□□□□ -2.58
SMN2-205ENST00000505346 TRIQKQ629K1 86 aa-1.04□□□□□ -2.58
SMN2-205ENST00000505346 MNS1Q8NEH6 495 aa-1.04□□□□□ -2.58
SMN2-205ENST00000505346 DYNLRB2Q8TF09 96 aa-1.04□□□□□ -2.58
SMN2-205ENST00000505346 CCDC115Q96NT0 180 aa-1.04□□□□□ -2.58
SMN2-205ENST00000505346 TACC2O95359 2948 aa-1.04□□□□□ -2.58
SMN2-205ENST00000505346 DNAH6Q9C0G6 4158 aa-1.05□□□□□ -2.58
SMN2-205ENST00000505346 SIPA1L3O60292 1781 aaPredicted RBP-1.05□□□□□ -2.58
SMN2-205ENST00000505346 DEGS1O15121 323 aa-1.05□□□□□ -2.58
SMN2-205ENST00000505346 E2F6O75461 281 aa-1.05□□□□□ -2.58
SMN2-205ENST00000505346 SPRR1AP35321 89 aa-1.05□□□□□ -2.58
SMN2-205ENST00000505346 SPRR2AP35326 72 aa-1.05□□□□□ -2.58
SMN2-205ENST00000505346 MRPS15P82914 257 aaKnown RBP-1.05□□□□□ -2.58
SMN2-205ENST00000505346 BATF3Q9NR55 127 aa-1.05□□□□□ -2.58
SMN2-205ENST00000505346 DNAJC15Q9Y5T4 150 aa-1.05□□□□□ -2.58
SMN2-205ENST00000505346 DNAH3Q8TD57 4116 aa-1.05□□□□□ -2.58
SMN2-205ENST00000505346 MUC22E2RYF6 1773 aaPredicted RBP-1.06□□□□□ -2.58
SMN2-205ENST00000505346 LAMC1P11047 1609 aa-1.06□□□□□ -2.58
SMN2-205ENST00000505346 TRAV2A0A0B4J234 112 aa-1.06□□□□□ -2.58
SMN2-205ENST00000505346 A0A0D9SFI3 127 aa-1.06□□□□□ -2.58
SMN2-205ENST00000505346 PFDN1O60925 122 aa-1.06□□□□□ -2.58
SMN2-205ENST00000505346 TMEM91Q6ZNR0 172 aa-1.06□□□□□ -2.58
SMN2-205ENST00000505346 NDUFA11Q86Y39 141 aa-1.06□□□□□ -2.58
SMN2-205ENST00000505346 PCBD2Q9H0N5 130 aa-1.06□□□□□ -2.58
SMN2-205ENST00000505346 NOP16Q9Y3C1 178 aaKnown RBP-1.06□□□□□ -2.58
SMN2-205ENST00000505346 RIF1Q5UIP0 2472 aaKnown RBP-1.06□□□□□ -2.58
SMN2-205ENST00000505346 TRAV12-3A0A0B4J271 114 aa-1.07□□□□□ -2.58
SMN2-205ENST00000505346 TRAV22A0A0B4J277 110 aa-1.07□□□□□ -2.58
SMN2-205ENST00000505346 MT-ND4LP03901 98 aa-1.07□□□□□ -2.58
SMN2-205ENST00000505346 SPINK8P0C7L1 97 aa-1.07□□□□□ -2.58
SMN2-205ENST00000505346 GNG10P50151 68 aa-1.07□□□□□ -2.58
SMN2-205ENST00000505346 Q8IZM0 81 aa-1.07□□□□□ -2.58
SMN2-205ENST00000505346 GVINP1Q7Z2Y8 2422 aa-1.07□□□□□ -2.58
SMN2-205ENST00000505346 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.07□□□□□ -2.58
SMN2-205ENST00000505346 ROCK1Q13464 1354 aa-1.08□□□□□ -2.58
SMN2-205ENST00000505346 ITPR1Q14643 2758 aa-1.08□□□□□ -2.58
SMN2-205ENST00000505346 SPCS2Q15005 226 aa-1.08□□□□□ -2.58
SMN2-205ENST00000505346 CDC26Q8NHZ8 85 aa-1.08□□□□□ -2.58
SMN2-205ENST00000505346 ERG28Q9UKR5 140 aa-1.08□□□□□ -2.58
SMN2-205ENST00000505346 MTORP42345 2549 aa-1.08□□□□□ -2.58
SMN2-205ENST00000505346 ANKRD11Q6UB99 2663 aaPredicted RBP-1.08□□□□□ -2.58
SMN2-205ENST00000505346 SRCAPQ6ZRS2 3230 aa-1.08□□□□□ -2.58
SMN2-205ENST00000505346 CUBNO60494 3623 aa-1.08□□□□□ -2.58
SMN2-205ENST00000505346 IFT172Q9UG01 1749 aa-1.09□□□□□ -2.58
SMN2-205ENST00000505346 ZMYM4Q5VZL5 1548 aa-1.09□□□□□ -2.58
SMN2-205ENST00000505346 CCDC168Q8NDH2 2452 aa-1.09□□□□□ -2.58
SMN2-205ENST00000505346 PLECQ15149 4684 aaKnown RBP-1.09□□□□□ -2.58
SMN2-205ENST00000505346 PKHD1L1Q86WI1 4243 aa-1.09□□□□□ -2.58
SMN2-205ENST00000505346 TRAV1-2A0A0B4J238 106 aa-1.09□□□□□ -2.58
SMN2-205ENST00000505346 TRBV10-3A0A0K0K1G6 114 aa-1.09□□□□□ -2.58
SMN2-205ENST00000505346 OR9Q1Q8NGQ5 310 aa-1.09□□□□□ -2.58
SMN2-205ENST00000505346 ATP6V0E2Q8NHE4 81 aa-1.09□□□□□ -2.58
SMN2-205ENST00000505346 ATPIF1Q9UII2 106 aa-1.09□□□□□ -2.58
SMN2-205ENST00000505346 OVOS2A0A0G2JMS6 1433 aa-1.09□□□□□ -2.58
SMN2-205ENST00000505346 MYO7BQ6PIF6 2116 aa-1.09□□□□□ -2.58
SMN2-205ENST00000505346 DNAH2Q9P225 4427 aa-1.09□□□□□ -2.58
SMN2-205ENST00000505346 GCN1Q92616 2671 aaKnown RBP-1.1□□□□□ -2.58
SMN2-205ENST00000505346 PLXNB2O15031 1838 aa-1.1□□□□□ -2.59
SMN2-205ENST00000505346 EDDM3BP56851 147 aa-1.1□□□□□ -2.59
SMN2-205ENST00000505346 DEFA5Q01523 94 aa-1.1□□□□□ -2.59
SMN2-205ENST00000505346 KRTAP19-6Q3LI70 58 aa-1.1□□□□□ -2.59
SMN2-205ENST00000505346 CLLU1Q5K131 121 aa-1.1□□□□□ -2.59
SMN2-205ENST00000505346 BANF2Q9H503 90 aa-1.1□□□□□ -2.59
SMN2-205ENST00000505346 CALML5Q9NZT1 146 aa-1.1□□□□□ -2.59
SMN2-205ENST00000505346 HTTP42858 3142 aa-1.1□□□□□ -2.59
SMN2-205ENST00000505346 A0A0C4DFX4 3053 aa-1.1□□□□□ -2.59
SMN2-205ENST00000505346 SPTA1P02549 2419 aa-1.1□□□□□ -2.59
SMN2-205ENST00000505346 UHRF1BP1LA0JNW5 1464 aa-1.11□□□□□ -2.59
SMN2-205ENST00000505346 TEX15Q9BXT5 2789 aa-1.11□□□□□ -2.59
SMN2-205ENST00000505346 DPM2O94777 84 aa-1.11□□□□□ -2.59
SMN2-205ENST00000505346 TNFP01375 233 aa-1.11□□□□□ -2.59
SMN2-205ENST00000505346 PAEPP09466 180 aa-1.11□□□□□ -2.59
SMN2-205ENST00000505346 HAMPP81172 84 aa-1.11□□□□□ -2.59
SMN2-205ENST00000505346 SCP2D1Q9UJQ7 156 aa-1.11□□□□□ -2.59
SMN2-205ENST00000505346 MYH13Q9UKX3 1938 aa-1.11□□□□□ -2.59
SMN2-205ENST00000505346 WNK3Q9BYP7 1800 aa-1.12□□□□□ -2.59
SMN2-205ENST00000505346 ACACAQ13085 2346 aa-1.12□□□□□ -2.59
SMN2-205ENST00000505346 J3QLW9 94 aa-1.12□□□□□ -2.59
SMN2-205ENST00000505346 HLA-DRB4P13762 266 aa-1.12□□□□□ -2.59
SMN2-205ENST00000505346 TMEM128Q5BJH2 165 aa-1.12□□□□□ -2.59
SMN2-205ENST00000505346 SAMD13Q5VXD3 122 aa-1.12□□□□□ -2.59
SMN2-205ENST00000505346 PPP1R2P3Q6NXS1 205 aa-1.12□□□□□ -2.59
SMN2-205ENST00000505346 TMEM35BQ8NCS4 154 aa-1.12□□□□□ -2.59
SMN2-205ENST00000505346 LSM2Q9Y333 95 aaKnown RBP-1.12□□□□□ -2.59
SMN2-205ENST00000505346 HLA-DRB4X5D2U9 266 aa-1.12□□□□□ -2.59
SMN2-205ENST00000505346 LRRK2Q5S007 2527 aa-1.12□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms