RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 ADCYAP1P18509 176 aa11.5□□□□□ -0.57
SYNE4-207ENST00000505054 SUMO4Q6EEV6 95 aa11.5□□□□□ -0.57
SYNE4-207ENST00000505054 NEXN-AS1Q8NBZ9 246 aa11.5□□□□□ -0.57
SYNE4-207ENST00000505054 KRTAP1-5Q9BYS1 174 aa11.5□□□□□ -0.57
SYNE4-207ENST00000505054 GTSF1LQ9H1H1 148 aa11.5□□□□□ -0.57
SYNE4-207ENST00000505054 DPH3P1Q9H4G8 78 aa11.5□□□□□ -0.57
SYNE4-207ENST00000505054 A0A1B0GUT8 65 aa11.49□□□□□ -0.57
SYNE4-207ENST00000505054 TMEM218A2RU14 115 aa11.49□□□□□ -0.57
SYNE4-207ENST00000505054 SIVA1O15304 175 aa11.49□□□□□ -0.57
SYNE4-207ENST00000505054 UBE2D3P61077 147 aa11.49□□□□□ -0.57
SYNE4-207ENST00000505054 UBE2D2P62837 147 aa11.49□□□□□ -0.57
SYNE4-207ENST00000505054 WFDC10BQ8IUB3 73 aa11.49□□□□□ -0.57
SYNE4-207ENST00000505054 NUP35Q8NFH5 326 aa11.49□□□□□ -0.57
SYNE4-207ENST00000505054 SMIM27A0A1W2PRY6 76 aa11.48□□□□□ -0.57
SYNE4-207ENST00000505054 C16orf90A8MZG2 172 aa11.48□□□□□ -0.57
SYNE4-207ENST00000505054 M0QY20 66 aa11.48□□□□□ -0.57
SYNE4-207ENST00000505054 RPL36AP83881 106 aaKnown RBP11.48□□□□□ -0.57
SYNE4-207ENST00000505054 PNRC1Q12796 327 aaPredicted RBP11.48□□□□□ -0.57
SYNE4-207ENST00000505054 RPL36ALQ969Q0 106 aaKnown RBP11.48□□□□□ -0.57
SYNE4-207ENST00000505054 TRBV7-3A0A075B6L6 115 aa11.47□□□□□ -0.57
SYNE4-207ENST00000505054 LELP1Q5T871 98 aa11.47□□□□□ -0.57
SYNE4-207ENST00000505054 BORCS7Q96B45 105 aa11.47□□□□□ -0.57
SYNE4-207ENST00000505054 NAT8BQ9UHF3 227 aa11.47□□□□□ -0.57
SYNE4-207ENST00000505054 TNP2Q05952 138 aa11.46□□□□□ -0.57
SYNE4-207ENST00000505054 MAPKAPK5-AS1Q8N8E1 139 aa11.46□□□□□ -0.57
SYNE4-207ENST00000505054 F8W036 122 aa11.45□□□□□ -0.58
SYNE4-207ENST00000505054 TTC32Q5I0X7 151 aa11.45□□□□□ -0.58
SYNE4-207ENST00000505054 OR10J3Q5JRS4 329 aa11.45□□□□□ -0.58
SYNE4-207ENST00000505054 SMIM15Q7Z3B0 74 aa11.45□□□□□ -0.58
SYNE4-207ENST00000505054 TRAV26-2A0A0B4J265 109 aa11.44□□□□□ -0.58
SYNE4-207ENST00000505054 H7C1H1 209 aa11.44□□□□□ -0.58
SYNE4-207ENST00000505054 DNAH10OSP0CZ25 163 aa11.44□□□□□ -0.58
SYNE4-207ENST00000505054 RASL11AQ6T310 242 aa11.44□□□□□ -0.58
SYNE4-207ENST00000505054 GATD1Q8NB37 220 aa11.44□□□□□ -0.58
SYNE4-207ENST00000505054 LRP1BQ9NZR2 4599 aa11.44□□□□□ -0.58
SYNE4-207ENST00000505054 TRAV8-6A0A0B4J262 113 aa11.43□□□□□ -0.58
SYNE4-207ENST00000505054 IGHV3-38A0A0C4DH36 116 aa11.43□□□□□ -0.58
SYNE4-207ENST00000505054 PPP1R2P9O14990 202 aa11.43□□□□□ -0.58
SYNE4-207ENST00000505054 RIGQ13278 110 aa11.43□□□□□ -0.58
SYNE4-207ENST00000505054 C6orf223Q8N319 242 aa11.43□□□□□ -0.58
SYNE4-207ENST00000505054 SEC11CQ9BY50 192 aa11.43□□□□□ -0.58
SYNE4-207ENST00000505054 TMEM191AQ9H0A3 160 aa11.43□□□□□ -0.58
SYNE4-207ENST00000505054 A0A087WWC5 75 aa11.42□□□□□ -0.58
SYNE4-207ENST00000505054 MT-ND4LP03901 98 aa11.42□□□□□ -0.58
SYNE4-207ENST00000505054 DNAJC30Q96LL9 226 aa11.42□□□□□ -0.58
SYNE4-207ENST00000505054 ANAPC16Q96DE5 110 aa11.41□□□□□ -0.58
SYNE4-207ENST00000505054 RNF185Q96GF1 192 aa11.41□□□□□ -0.58
SYNE4-207ENST00000505054 NIT2Q9NQR4 276 aa11.41□□□□□ -0.58
SYNE4-207ENST00000505054 TNFRSF18Q9Y5U5 241 aa11.41□□□□□ -0.58
SYNE4-207ENST00000505054 LINC01556Q5JQF7 62 aa11.4□□□□□ -0.58
SYNE4-207ENST00000505054 C10orf91Q5T1B1 145 aa11.4□□□□□ -0.58
SYNE4-207ENST00000505054 AMN1Q8IY45 258 aa11.4□□□□□ -0.58
SYNE4-207ENST00000505054 Q8N3U1 123 aa11.4□□□□□ -0.58
SYNE4-207ENST00000505054 RPL39LQ96EH5 51 aaKnown RBP11.4□□□□□ -0.58
SYNE4-207ENST00000505054 A0A1B0GXF2 115 aa11.39□□□□□ -0.59
SYNE4-207ENST00000505054 GAS8-AS1O95177 125 aa11.39□□□□□ -0.59
SYNE4-207ENST00000505054 MRPL54Q6P161 138 aaKnown RBP11.39□□□□□ -0.59
SYNE4-207ENST00000505054 DAZ4Q86SG3 579 aaKnown RBP11.39□□□□□ -0.59
SYNE4-207ENST00000505054 Q8N1X5 172 aa11.39□□□□□ -0.59
SYNE4-207ENST00000505054 DAZ3Q9NR90 486 aaKnown RBP11.39□□□□□ -0.59
SYNE4-207ENST00000505054 TRBV6-8A0A0A6YYG3 113 aa11.38□□□□□ -0.59
SYNE4-207ENST00000505054 RAB4AP20338 218 aa11.38□□□□□ -0.59
SYNE4-207ENST00000505054 CAMPP49913 170 aa11.38□□□□□ -0.59
SYNE4-207ENST00000505054 NTM-AS1Q6ZSK4 140 aa11.38□□□□□ -0.59
SYNE4-207ENST00000505054 FRZBQ92765 325 aa11.38□□□□□ -0.59
SYNE4-207ENST00000505054 CARHSP1Q9Y2V2 147 aaKnown RBP11.38□□□□□ -0.59
SYNE4-207ENST00000505054 APOBP04114 4563 aaKnown RBP11.37□□□□□ -0.59
SYNE4-207ENST00000505054 TRAV9-2A0A087WT02 112 aa11.37□□□□□ -0.59
SYNE4-207ENST00000505054 A0A1B0GW15 77 aa11.37□□□□□ -0.59
SYNE4-207ENST00000505054 K7EP13 123 aa11.37□□□□□ -0.59
SYNE4-207ENST00000505054 IGHV3-30P01768 117 aa11.37□□□□□ -0.59
SYNE4-207ENST00000505054 IGHV3-33P01772 117 aa11.37□□□□□ -0.59
SYNE4-207ENST00000505054 IGHV3-30-3P0DP02 117 aa11.37□□□□□ -0.59
SYNE4-207ENST00000505054 IGHV3-30-5P0DP03 117 aa11.37□□□□□ -0.59
SYNE4-207ENST00000505054 HBBP68871 147 aa11.37□□□□□ -0.59
SYNE4-207ENST00000505054 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.37□□□□□ -0.59
SYNE4-207ENST00000505054 BTF3P20290 206 aaKnown RBP11.36□□□□□ -0.59
SYNE4-207ENST00000505054 FAM104BQ5XKR9 115 aa11.36□□□□□ -0.59
SYNE4-207ENST00000505054 NIT1Q86X76 327 aa11.36□□□□□ -0.59
SYNE4-207ENST00000505054 MRAP2Q96G30 205 aa11.36□□□□□ -0.59
SYNE4-207ENST00000505054 NCR2O95944 276 aa11.35□□□□□ -0.59
SYNE4-207ENST00000505054 RPS10P46783 165 aaKnown RBP11.35□□□□□ -0.59
SYNE4-207ENST00000505054 TMEM97Q5BJF2 176 aa11.35□□□□□ -0.59
SYNE4-207ENST00000505054 Q6ZRN7 208 aaPredicted RBP11.35□□□□□ -0.59
SYNE4-207ENST00000505054 ATP5L2Q7Z4Y8 100 aa11.35□□□□□ -0.59
SYNE4-207ENST00000505054 C10orf126Q8N4M7 172 aa11.35□□□□□ -0.59
SYNE4-207ENST00000505054 TRBV6-5A0A0K0K1A5 114 aa11.34□□□□□ -0.59
SYNE4-207ENST00000505054 SMKR1H3BMG3 65 aa11.34□□□□□ -0.59
SYNE4-207ENST00000505054 MRPL51Q4U2R6 128 aaKnown RBP11.34□□□□□ -0.59
SYNE4-207ENST00000505054 SPATA12Q7Z6I5 190 aa11.34□□□□□ -0.59
SYNE4-207ENST00000505054 DEFB104AQ8WTQ1 72 aa11.34□□□□□ -0.59
SYNE4-207ENST00000505054 CTDSP1Q9GZU7 261 aa11.34□□□□□ -0.59
SYNE4-207ENST00000505054 SDHAF1A6NFY7 115 aa11.33□□□□□ -0.6
SYNE4-207ENST00000505054 IBA57-AS1B1ANH7 110 aa11.33□□□□□ -0.6
SYNE4-207ENST00000505054 S100A8P05109 93 aa11.33□□□□□ -0.6
SYNE4-207ENST00000505054 IQCJQ1A5X6 159 aa11.33□□□□□ -0.6
SYNE4-207ENST00000505054 KCNIP4Q6PIL6 250 aa11.32□□□□□ -0.6
SYNE4-207ENST00000505054 NRACQ8N912 160 aa11.32□□□□□ -0.6
SYNE4-207ENST00000505054 CLRN3Q8NCR9 226 aa11.32□□□□□ -0.6
SYNE4-207ENST00000505054 IMMP2LQ96T52 175 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms