RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 CDPF1Q6NVV7 123 aa9.56□□□□□ -0.88
LMNA-220ENST00000504687 DNAJC30Q96LL9 226 aa9.56□□□□□ -0.88
LMNA-220ENST00000504687 C18orf15Q96N68 181 aa9.56□□□□□ -0.88
LMNA-220ENST00000504687 IGHV3OR16-12A0A075B7B8 117 aa9.55□□□□□ -0.88
LMNA-220ENST00000504687 TRAV4A0A0B4J268 109 aa9.55□□□□□ -0.88
LMNA-220ENST00000504687 LINC00612Q8N6U2 182 aa9.55□□□□□ -0.88
LMNA-220ENST00000504687 C20orf202A1L168 122 aa9.54□□□□□ -0.88
LMNA-220ENST00000504687 SDHAF1A6NFY7 115 aa9.54□□□□□ -0.88
LMNA-220ENST00000504687 ATP5LO75964 103 aa9.54□□□□□ -0.88
LMNA-220ENST00000504687 LINC01545Q5VT33 79 aa9.54□□□□□ -0.88
LMNA-220ENST00000504687 LINC00173Q6ZV60 143 aa9.54□□□□□ -0.88
LMNA-220ENST00000504687 MRPL16Q9NX20 251 aaKnown RBP9.54□□□□□ -0.88
LMNA-220ENST00000504687 STAB1Q9NY15 2570 aa9.53□□□□□ -0.88
LMNA-220ENST00000504687 RHOHQ15669 191 aa9.53□□□□□ -0.88
LMNA-220ENST00000504687 TOMM6Q96B49 74 aa9.53□□□□□ -0.88
LMNA-220ENST00000504687 IFI27L1Q96BM0 104 aa9.53□□□□□ -0.88
LMNA-220ENST00000504687 KIR2DL4Q99706 377 aa9.53□□□□□ -0.88
LMNA-220ENST00000504687 X6R8D5 127 aa9.53□□□□□ -0.88
LMNA-220ENST00000504687 TRGV1A0A0A0MS02 117 aa9.52□□□□□ -0.89
LMNA-220ENST00000504687 TRBV10-1A0A0K0K1A3 114 aa9.52□□□□□ -0.89
LMNA-220ENST00000504687 PKIAP61925 76 aa9.52□□□□□ -0.89
LMNA-220ENST00000504687 LGALS9CQ6DKI2 356 aa9.52□□□□□ -0.89
LMNA-220ENST00000504687 OR4C5Q8NGB2 326 aa9.52□□□□□ -0.89
LMNA-220ENST00000504687 I3L3M4 83 aa9.51□□□□□ -0.89
LMNA-220ENST00000504687 Q6ZTI0 123 aa9.51□□□□□ -0.89
LMNA-220ENST00000504687 NOP10Q9NPE3 64 aaKnown RBP9.51□□□□□ -0.89
LMNA-220ENST00000504687 NUDT3O95989 172 aa9.5□□□□□ -0.89
LMNA-220ENST00000504687 IGHV4-30-4P0DP06 118 aa9.5□□□□□ -0.89
LMNA-220ENST00000504687 ZNF664Q8N3J9 261 aa9.5□□□□□ -0.89
LMNA-220ENST00000504687 VWFP04275 2813 aa9.49□□□□□ -0.89
LMNA-220ENST00000504687 LYRM9A8MSI8 78 aa9.49□□□□□ -0.89
LMNA-220ENST00000504687 TSTD3H0UI37 97 aa9.49□□□□□ -0.89
LMNA-220ENST00000504687 OXLD1Q5BKU9 147 aa9.49□□□□□ -0.89
LMNA-220ENST00000504687 Q6ZSN1 163 aa9.49□□□□□ -0.89
LMNA-220ENST00000504687 ERASQ7Z444 233 aa9.49□□□□□ -0.89
LMNA-220ENST00000504687 NEXN-AS1Q8NBZ9 246 aa9.49□□□□□ -0.89
LMNA-220ENST00000504687 VAMP8Q9BV40 100 aa9.49□□□□□ -0.89
LMNA-220ENST00000504687 ZMAT4Q9H898 229 aa9.49□□□□□ -0.89
LMNA-220ENST00000504687 CYSLTR1Q9Y271 337 aa9.49□□□□□ -0.89
LMNA-220ENST00000504687 TP53TG1Q9Y2A0 90 aa9.49□□□□□ -0.89
LMNA-220ENST00000504687 TRAV9-2A0A087WT02 112 aa9.48□□□□□ -0.89
LMNA-220ENST00000504687 TRAV12-1A0A0B4J245 112 aa9.48□□□□□ -0.89
LMNA-220ENST00000504687 TRBV6-4A0A1B0GX49 114 aa9.48□□□□□ -0.89
LMNA-220ENST00000504687 TSHBP01222 138 aa9.48□□□□□ -0.89
LMNA-220ENST00000504687 NPSP0C0P6 89 aa9.48□□□□□ -0.89
LMNA-220ENST00000504687 MIFP14174 115 aa9.48□□□□□ -0.89
LMNA-220ENST00000504687 KRTAP10-11P60412 298 aa9.48□□□□□ -0.89
LMNA-220ENST00000504687 SAMD5Q5TGI4 173 aa9.48□□□□□ -0.89
LMNA-220ENST00000504687 C2orf66Q6UXQ4 117 aa9.48□□□□□ -0.89
LMNA-220ENST00000504687 RNF183Q96D59 192 aa9.48□□□□□ -0.89
LMNA-220ENST00000504687 ZNF479Q96JC4 524 aa9.48□□□□□ -0.89
LMNA-220ENST00000504687 TNFRSF18Q9Y5U5 241 aa9.48□□□□□ -0.89
LMNA-220ENST00000504687 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.47□□□□□ -0.89
LMNA-220ENST00000504687 TMEM141Q96I45 108 aa9.47□□□□□ -0.89
LMNA-220ENST00000504687 TIMM17AQ99595 171 aa9.47□□□□□ -0.89
LMNA-220ENST00000504687 IGIPA6NJ69 53 aa9.46□□□□□ -0.9
LMNA-220ENST00000504687 K7EQD1 137 aa9.46□□□□□ -0.9
LMNA-220ENST00000504687 TRBV7-3A0A075B6L6 115 aa9.45□□□□□ -0.9
LMNA-220ENST00000504687 TRGV2A0A075B6R0 118 aa9.45□□□□□ -0.9
LMNA-220ENST00000504687 IGHV3-73A0A0B4J1V6 119 aa9.45□□□□□ -0.9
LMNA-220ENST00000504687 P0DMU3 169 aa9.45□□□□□ -0.9
LMNA-220ENST00000504687 FAM231AP0DMU4 169 aa9.45□□□□□ -0.9
LMNA-220ENST00000504687 FAM231CP0DMU5 169 aa9.45□□□□□ -0.9
LMNA-220ENST00000504687 ODF1Q14990 250 aa9.45□□□□□ -0.9
LMNA-220ENST00000504687 C20orf203Q8NBC4 194 aa9.45□□□□□ -0.9
LMNA-220ENST00000504687 SCGB3A1Q96QR1 104 aa9.45□□□□□ -0.9
LMNA-220ENST00000504687 PYGO1Q9Y3Y4 419 aa9.45□□□□□ -0.9
LMNA-220ENST00000504687 GAGE12BA1L429 117 aa9.44□□□□□ -0.9
LMNA-220ENST00000504687 GAGE7O76087 117 aa9.44□□□□□ -0.9
LMNA-220ENST00000504687 GAGE12FP0CL80 117 aa9.44□□□□□ -0.9
LMNA-220ENST00000504687 GAGE12GP0CL81 117 aa9.44□□□□□ -0.9
LMNA-220ENST00000504687 GAGE12IP0CL82 117 aa9.44□□□□□ -0.9
LMNA-220ENST00000504687 CRYBA4P53673 196 aa9.44□□□□□ -0.9
LMNA-220ENST00000504687 RPL36AP83881 106 aaKnown RBP9.44□□□□□ -0.9
LMNA-220ENST00000504687 FHL2Q14192 279 aa9.44□□□□□ -0.9
LMNA-220ENST00000504687 DEFB135Q30KP9 77 aa9.44□□□□□ -0.9
LMNA-220ENST00000504687 DAZ4Q86SG3 579 aaKnown RBP9.44□□□□□ -0.9
LMNA-220ENST00000504687 Q8NAQ8 132 aa9.44□□□□□ -0.9
LMNA-220ENST00000504687 OR11H2Q8NH07 326 aa9.44□□□□□ -0.9
LMNA-220ENST00000504687 RPL36ALQ969Q0 106 aaKnown RBP9.44□□□□□ -0.9
LMNA-220ENST00000504687 DAZ3Q9NR90 486 aaKnown RBP9.44□□□□□ -0.9
LMNA-220ENST00000504687 A0A087WX48 190 aa9.43□□□□□ -0.9
LMNA-220ENST00000504687 TEX48A0A1B0GUV7 120 aa9.43□□□□□ -0.9
LMNA-220ENST00000504687 PRSS1P07477 247 aa9.43□□□□□ -0.9
LMNA-220ENST00000504687 SPATA45Q537H7 98 aa9.43□□□□□ -0.9
LMNA-220ENST00000504687 Q6ZN92 141 aa9.43□□□□□ -0.9
LMNA-220ENST00000504687 NEGR1Q7Z3B1 354 aa9.43□□□□□ -0.9
LMNA-220ENST00000504687 SLC25A29Q8N8R3 303 aa9.43□□□□□ -0.9
LMNA-220ENST00000504687 CMYA5Q8N3K9 4069 aa9.42□□□□□ -0.9
LMNA-220ENST00000504687 ANK2Q01484 3957 aa9.42□□□□□ -0.9
LMNA-220ENST00000504687 NOTCH3Q9UM47 2321 aa9.42□□□□□ -0.9
LMNA-220ENST00000504687 UBE2D3P61077 147 aa9.42□□□□□ -0.9
LMNA-220ENST00000504687 UBE2D2P62837 147 aa9.42□□□□□ -0.9
LMNA-220ENST00000504687 KPRPQ5T749 579 aaPredicted RBP9.42□□□□□ -0.9
LMNA-220ENST00000504687 DKK2Q9UBU2 259 aa9.42□□□□□ -0.9
LMNA-220ENST00000504687 PAM16Q9Y3D7 125 aa9.42□□□□□ -0.9
LMNA-220ENST00000504687 IGHV4-28A0A0C4DH34 117 aa9.41□□□□□ -0.9
LMNA-220ENST00000504687 PCP4L1A6NKN8 68 aa9.41□□□□□ -0.9
LMNA-220ENST00000504687 HSBP1L1C9JCN9 74 aa9.41□□□□□ -0.9
LMNA-220ENST00000504687 LINC00694P0DN24 101 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms