RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 RBMY1DP0C7P1 496 aaKnown RBP2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 RBMY1A1P0DJD3 496 aaKnown RBP2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 RBMY1CP0DJD4 496 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 B3GALT5-AS1P59052 145 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 UBE2D3P61077 147 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 UBE2D2P62837 147 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 FAM231DQ6ZW35 169 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 Q86TA4 180 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 RHPN1-AS1Q9BWJ2 59 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 SLC25A2Q9BXI2 301 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 XCL2Q9UBD3 114 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 ITPR1Q14643 2758 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 CRPP02741 224 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 MRPL51Q4U2R6 128 aaKnown RBP2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 SMCR5Q8TEV8 140 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 GAFA1Q96PS6 74 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 A0A096LPF7 62 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 LTAP01374 205 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 P0DMU3 169 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 FAM231AP0DMU4 169 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 FAM231CP0DMU5 169 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 DEFB131AP59861 70 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 TMEM30BQ3MIR4 351 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 FAM104BQ5XKR9 115 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 RUSC1-AS1Q66K80 236 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 ZNF575Q86XF7 245 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 TRGV9Q99603 122 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 DPH3P1Q9H4G8 78 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 MSRB1Q9NZV6 116 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 PKIGQ9Y2B9 76 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 BPESC1Q9GZL8 116 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 V9GYY9 64 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 ATMQ13315 3056 aa2.83□□□□□ -1.96
PCDH11X-208ENST00000504220 BUB1B-PAK6H3BSN5 160 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 VCYO14598 125 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 SLC25A20O43772 301 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 PLA2G2AP14555 144 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 DEFB1P60022 68 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 HAMPP81172 84 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 C9orf153Q5TBE3 101 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 KLHL30-AS1Q8NEE0 82 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 NTN5Q8WTR8 489 aaPredicted RBP2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 COPS9Q8WXC6 57 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 A0A0G2JNJ9 132 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 WI2-2373I1.2A0A1W2PRP0 233 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 SDHAF1A6NFY7 115 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 SAA4P35542 130 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 CLPSL2Q6UWE3 100 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 TIMM21Q9BVV7 248 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 ZMAT4Q9H898 229 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 Q9UFV3 132 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 KLF12Q9Y4X4 402 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 ATP6V0E1O15342 81 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 LYPD5Q6UWN5 251 aa2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 MBD3L2Q8NHZ7 208 aaPredicted RBP2.82□□□□□ -1.96
PCDH11X-208ENST00000504220 E7EQL1 145 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 CRIP2P52943 208 aaPredicted RBP2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 ZFP2Q6ZN57 461 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 Q6ZRU5 148 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 PRR25Q96S07 402 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 SHANK2-AS3Q9BTD1 123 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 TMEM14BQ9NUH8 114 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 HECTD1Q9ULT8 2610 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 TRBV19A0A075B6N1 114 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 GNRH2O43555 120 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 HOXD3P31249 432 aaPredicted RBP2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 RPL36AP83881 106 aaKnown RBP2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 RPL36ALQ969Q0 106 aaKnown RBP2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 PRSS22Q9GZN4 317 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 C22orf24Q9Y442 160 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 LY96Q9Y6Y9 160 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 MGAM2Q2M2H8 2515 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 TRBV6-6A0A0A6YYG2 114 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 A0A1B0GXF2 115 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 SMIM27A0A1W2PRY6 76 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 H3BMM0 161 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 PMVKQ15126 192 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 HIST2H2BCQ6DN03 193 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 HIST2H2BDQ6DRA6 164 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 LY6G5BQ8NDX9 201 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 PLEKHB2Q96CS7 222 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 DSCR8Q96T75 97 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 ESM1Q9NQ30 184 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 NDUFA4L2Q9NRX3 87 aa2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 MAP1AP78559 2803 aaPredicted RBP2.81□□□□□ -1.96
PCDH11X-208ENST00000504220 IGLV3-9A0A075B6K5 115 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 TCL1BO95988 128 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 TAL2Q16559 108 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 C17orf58Q2M2W7 97 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 C12orf74Q32Q52 190 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 DAND5Q8N907 189 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 ZNF747Q9BV97 191 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 FGF23Q9GZV9 251 aaPredicted RBP2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 TRBV7-3A0A075B6L6 115 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 LGALS1P09382 135 aaKnown RBP2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 EGR2P11161 476 aaPredicted RBP2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 PSMB8P28062 276 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 DEFB121Q5J5C9 76 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 C9orf139Q6ZV77 190 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms