RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 RNF151Q2KHN1 245 aa12.18□□□□□ -0.46
VCAN-204ENST00000502527 KHDC1LQ5JSQ8 128 aa12.18□□□□□ -0.46
VCAN-204ENST00000502527 SCGB1D4Q6XE38 83 aa12.18□□□□□ -0.46
VCAN-204ENST00000502527 TMEM61Q8N0U2 210 aa12.18□□□□□ -0.46
VCAN-204ENST00000502527 IGLL5B9A064 214 aa12.17□□□□□ -0.46
VCAN-204ENST00000502527 HTN1P15515 57 aa12.17□□□□□ -0.46
VCAN-204ENST00000502527 EMP1P54849 157 aa12.17□□□□□ -0.46
VCAN-204ENST00000502527 TMEM86BQ8N661 226 aa12.17□□□□□ -0.46
VCAN-204ENST00000502527 EDA2RQ9HAV5 297 aa12.17□□□□□ -0.46
VCAN-204ENST00000502527 AGRNO00468 2067 aa12.17□□□□□ -0.46
VCAN-204ENST00000502527 DYNLRB2Q8TF09 96 aa12.17□□□□□ -0.46
VCAN-204ENST00000502527 CREBBPQ92793 2442 aa12.16□□□□□ -0.46
VCAN-204ENST00000502527 A0A1B0GWB2 263 aa12.16□□□□□ -0.46
VCAN-204ENST00000502527 KRTAP1-3Q8IUG1 177 aa12.16□□□□□ -0.46
VCAN-204ENST00000502527 TEX29Q8N6K0 151 aa12.16□□□□□ -0.46
VCAN-204ENST00000502527 C20orf203Q8NBC4 194 aa12.16□□□□□ -0.46
VCAN-204ENST00000502527 KLHL30-AS1Q8NEE0 82 aa12.16□□□□□ -0.46
VCAN-204ENST00000502527 DLX4Q92988 240 aaPredicted RBP12.16□□□□□ -0.46
VCAN-204ENST00000502527 DUX3Q96PT4 197 aa12.16□□□□□ -0.46
VCAN-204ENST00000502527 RBMY1BA6NDE4 496 aaKnown RBP12.15□□□□□ -0.46
VCAN-204ENST00000502527 RBMY1EA6NEQ0 496 aaKnown RBP12.15□□□□□ -0.46
VCAN-204ENST00000502527 RBMY1DP0C7P1 496 aaKnown RBP12.15□□□□□ -0.46
VCAN-204ENST00000502527 P0DMU3 169 aa12.15□□□□□ -0.46
VCAN-204ENST00000502527 FAM231AP0DMU4 169 aa12.15□□□□□ -0.46
VCAN-204ENST00000502527 FAM231CP0DMU5 169 aa12.15□□□□□ -0.46
VCAN-204ENST00000502527 TMEM170BQ5T4T1 132 aa12.15□□□□□ -0.46
VCAN-204ENST00000502527 ZNF479Q96JC4 524 aa12.15□□□□□ -0.46
VCAN-204ENST00000502527 SPAG8Q99932 426 aaPredicted RBP12.15□□□□□ -0.46
VCAN-204ENST00000502527 PIK3CD-AS1Q5SR53 167 aa12.15□□□□□ -0.46
VCAN-204ENST00000502527 ZNRF2Q8NHG8 242 aa12.15□□□□□ -0.46
VCAN-204ENST00000502527 NFE4Q86UQ8 179 aa12.14□□□□□ -0.47
VCAN-204ENST00000502527 PLEKHB2Q96CS7 222 aa12.14□□□□□ -0.47
VCAN-204ENST00000502527 MAP6D1Q9H9H5 199 aa12.14□□□□□ -0.47
VCAN-204ENST00000502527 A8MWV9 139 aa12.14□□□□□ -0.47
VCAN-204ENST00000502527 M0R2P5 195 aa12.14□□□□□ -0.47
VCAN-204ENST00000502527 ZNF415Q09FC8 603 aa12.14□□□□□ -0.47
VCAN-204ENST00000502527 SRSF9Q13242 221 aaKnown RBP eCLIP12.14□□□□□ -0.47
VCAN-204ENST00000502527 DEFB114Q30KQ6 69 aa12.14□□□□□ -0.47
VCAN-204ENST00000502527 ABCA12Q86UK0 2595 aa12.13□□□□□ -0.47
VCAN-204ENST00000502527 CFAP161Q6P656 301 aa12.13□□□□□ -0.47
VCAN-204ENST00000502527 PTH2Q96A98 100 aa12.13□□□□□ -0.47
VCAN-204ENST00000502527 RAX2Q96IS3 184 aa12.13□□□□□ -0.47
VCAN-204ENST00000502527 RRN3P1Q2M238 152 aa12.12□□□□□ -0.47
VCAN-204ENST00000502527 VPS25Q9BRG1 176 aa12.12□□□□□ -0.47
VCAN-204ENST00000502527 SORL1Q92673 2214 aa12.12□□□□□ -0.47
VCAN-204ENST00000502527 IGHV3-73A0A0B4J1V6 119 aa12.12□□□□□ -0.47
VCAN-204ENST00000502527 Q6ZSV7 163 aa12.12□□□□□ -0.47
VCAN-204ENST00000502527 OPRPNQ99935 248 aaPredicted RBP12.12□□□□□ -0.47
VCAN-204ENST00000502527 LINC00467Q9BRT7 94 aa12.12□□□□□ -0.47
VCAN-204ENST00000502527 TEX15Q9BXT5 2789 aa12.11□□□□□ -0.47
VCAN-204ENST00000502527 A0A0J9YY99 117 aa12.1□□□□□ -0.47
VCAN-204ENST00000502527 SAP30O75446 220 aa12.1□□□□□ -0.47
VCAN-204ENST00000502527 LINC01587Q99440 93 aa12.1□□□□□ -0.47
VCAN-204ENST00000502527 VCX2Q9H322 139 aa12.1□□□□□ -0.47
VCAN-204ENST00000502527 TNFRSF18Q9Y5U5 241 aa12.1□□□□□ -0.47
VCAN-204ENST00000502527 PCP4P48539 62 aa12.1□□□□□ -0.47
VCAN-204ENST00000502527 IGLV4-3A0A075B6K6 122 aa12.09□□□□□ -0.47
VCAN-204ENST00000502527 J3QQQ9 107 aa12.09□□□□□ -0.47
VCAN-204ENST00000502527 INSP01308 110 aa12.09□□□□□ -0.47
VCAN-204ENST00000502527 PROK1P58294 105 aa12.09□□□□□ -0.47
VCAN-204ENST00000502527 TSPEAR-AS2P59090 65 aa12.09□□□□□ -0.47
VCAN-204ENST00000502527 PYGO1Q9Y3Y4 419 aa12.09□□□□□ -0.47
VCAN-204ENST00000502527 DNAJC9-AS1A6NH13 148 aa12.09□□□□□ -0.47
VCAN-204ENST00000502527 PRM2P04554 102 aa12.09□□□□□ -0.47
VCAN-204ENST00000502527 LGALS3P17931 250 aaKnown RBP12.09□□□□□ -0.47
VCAN-204ENST00000502527 SPXQ9BT56 116 aa12.09□□□□□ -0.47
VCAN-204ENST00000502527 SPANXB1Q9NS25 103 aaPredicted RBP12.09□□□□□ -0.47
VCAN-204ENST00000502527 CLUHP3Q96NS8 147 aa12.08□□□□□ -0.48
VCAN-204ENST00000502527 TRAV25A0A0B4J276 109 aa12.07□□□□□ -0.48
VCAN-204ENST00000502527 TMEM223A0PJW6 202 aa12.07□□□□□ -0.48
VCAN-204ENST00000502527 RHODO00212 210 aa12.07□□□□□ -0.48
VCAN-204ENST00000502527 UBE2D1P51668 147 aa12.07□□□□□ -0.48
VCAN-204ENST00000502527 CFAP126Q5VTH2 177 aa12.07□□□□□ -0.48
VCAN-204ENST00000502527 F8W1H4 67 aa12.07□□□□□ -0.48
VCAN-204ENST00000502527 G3V4G9 280 aa12.07□□□□□ -0.48
VCAN-204ENST00000502527 LEPROTO15243 131 aa12.07□□□□□ -0.48
VCAN-204ENST00000502527 CD28P10747 220 aa12.07□□□□□ -0.48
VCAN-204ENST00000502527 SLC25A29Q8N8R3 303 aa12.07□□□□□ -0.48
VCAN-204ENST00000502527 C11orf72Q8NBR9 251 aa12.07□□□□□ -0.48
VCAN-204ENST00000502527 WFDC11Q8NEX6 87 aa12.07□□□□□ -0.48
VCAN-204ENST00000502527 MYO9AB2RTY4 2548 aa12.07□□□□□ -0.48
VCAN-204ENST00000502527 ZNF22P17026 224 aaPredicted RBP12.06□□□□□ -0.48
VCAN-204ENST00000502527 CRYBA4P53673 196 aa12.06□□□□□ -0.48
VCAN-204ENST00000502527 C21orf62-AS1Q17RA5 79 aa12.06□□□□□ -0.48
VCAN-204ENST00000502527 AMELXQ99217 191 aa12.06□□□□□ -0.48
VCAN-204ENST00000502527 PGPEP1Q9NXJ5 209 aa12.06□□□□□ -0.48
VCAN-204ENST00000502527 BEAN1Q3B7T3 259 aa12.06□□□□□ -0.48
VCAN-204ENST00000502527 HIST2H2BDQ6DRA6 164 aa12.06□□□□□ -0.48
VCAN-204ENST00000502527 MRPL16Q9NX20 251 aaKnown RBP12.06□□□□□ -0.48
VCAN-204ENST00000502527 A0A0J9YXV3 536 aa12.05□□□□□ -0.48
VCAN-204ENST00000502527 FHL3Q13643 280 aa12.04□□□□□ -0.48
VCAN-204ENST00000502527 Q6ZSN1 163 aa12.04□□□□□ -0.48
VCAN-204ENST00000502527 DNAJC30Q96LL9 226 aa12.04□□□□□ -0.48
VCAN-204ENST00000502527 APCP25054 2843 aa12.04□□□□□ -0.48
VCAN-204ENST00000502527 H3BMG7 143 aa12.04□□□□□ -0.48
VCAN-204ENST00000502527 IGHV3-30P01768 117 aa12.04□□□□□ -0.48
VCAN-204ENST00000502527 IGHV3-30-5P0DP03 117 aa12.04□□□□□ -0.48
VCAN-204ENST00000502527 ODF3L2Q3SX64 289 aa12.04□□□□□ -0.48
VCAN-204ENST00000502527 CCL24O00175 119 aa12.03□□□□□ -0.48
VCAN-204ENST00000502527 IGHV3-53P01767 116 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 355.1 ms