RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 CCDC179H3BU77 68 aa8.32□□□□□ -1.08
AC055717.1-201ENST00000502221 GPHB5Q86YW7 130 aa8.32□□□□□ -1.08
AC055717.1-201ENST00000502221 EEF1AKMT3Q96AZ1 226 aa8.32□□□□□ -1.08
AC055717.1-201ENST00000502221 ODF3Q96PU9 254 aa8.32□□□□□ -1.08
AC055717.1-201ENST00000502221 AMELXQ99217 191 aa8.32□□□□□ -1.08
AC055717.1-201ENST00000502221 TP53TG1Q9Y2A0 90 aa8.32□□□□□ -1.08
AC055717.1-201ENST00000502221 TNFRSF18Q9Y5U5 241 aa8.32□□□□□ -1.08
AC055717.1-201ENST00000502221 C2CD3Q4AC94 2353 aa8.32□□□□□ -1.08
AC055717.1-201ENST00000502221 PLXNB1O43157 2135 aa8.32□□□□□ -1.08
AC055717.1-201ENST00000502221 TRBV6-5A0A0K0K1A5 114 aa8.31□□□□□ -1.08
AC055717.1-201ENST00000502221 TRBV7-7A0A0K0K1E9 115 aa8.31□□□□□ -1.08
AC055717.1-201ENST00000502221 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.31□□□□□ -1.08
AC055717.1-201ENST00000502221 DUSP14O95147 198 aaKnown RBP8.31□□□□□ -1.08
AC055717.1-201ENST00000502221 ATP5G1P05496 136 aa8.31□□□□□ -1.08
AC055717.1-201ENST00000502221 POLR2KP53803 58 aaKnown RBP8.31□□□□□ -1.08
AC055717.1-201ENST00000502221 RHOHQ15669 191 aa8.31□□□□□ -1.08
AC055717.1-201ENST00000502221 APRG1Q8IVJ8 170 aa8.31□□□□□ -1.08
AC055717.1-201ENST00000502221 SMIM20Q8N5G0 67 aa8.31□□□□□ -1.08
AC055717.1-201ENST00000502221 C14orf178Q8N769 122 aaPredicted RBP8.31□□□□□ -1.08
AC055717.1-201ENST00000502221 ABCA4P78363 2273 aa8.31□□□□□ -1.08
AC055717.1-201ENST00000502221 MALRD1Q5VYJ5 2156 aa8.31□□□□□ -1.08
AC055717.1-201ENST00000502221 MGPP08493 103 aa8.31□□□□□ -1.08
AC055717.1-201ENST00000502221 Q1RN00 199 aa8.31□□□□□ -1.08
AC055717.1-201ENST00000502221 RPL39LQ96EH5 51 aaKnown RBP8.31□□□□□ -1.08
AC055717.1-201ENST00000502221 C16orf92Q96LL3 132 aa8.31□□□□□ -1.08
AC055717.1-201ENST00000502221 TMEM223A0PJW6 202 aa8.3□□□□□ -1.08
AC055717.1-201ENST00000502221 TSHBP01222 138 aa8.3□□□□□ -1.08
AC055717.1-201ENST00000502221 C15orf32Q32M92 178 aa8.3□□□□□ -1.08
AC055717.1-201ENST00000502221 MEIG1Q5JSS6 88 aa8.3□□□□□ -1.08
AC055717.1-201ENST00000502221 FAM159AQ6UWV7 190 aa8.3□□□□□ -1.08
AC055717.1-201ENST00000502221 Q6ZS46 218 aa8.3□□□□□ -1.08
AC055717.1-201ENST00000502221 KRTAP1-3Q8IUG1 177 aa8.3□□□□□ -1.08
AC055717.1-201ENST00000502221 ITPR3Q14573 2671 aa8.3□□□□□ -1.08
AC055717.1-201ENST00000502221 TRBV27A0A0K0K1C4 114 aa8.3□□□□□ -1.08
AC055717.1-201ENST00000502221 CLPSL1A2RUU4 121 aa8.3□□□□□ -1.08
AC055717.1-201ENST00000502221 LINC01548A6NM66 108 aa8.3□□□□□ -1.08
AC055717.1-201ENST00000502221 E7EQL1 145 aa8.3□□□□□ -1.08
AC055717.1-201ENST00000502221 IGHV3-23P01764 117 aa8.3□□□□□ -1.08
AC055717.1-201ENST00000502221 C2orf82Q6UX34 121 aa8.3□□□□□ -1.08
AC055717.1-201ENST00000502221 TRPT1Q86TN4 253 aaKnown RBP8.3□□□□□ -1.08
AC055717.1-201ENST00000502221 WFDC11Q8NEX6 87 aa8.3□□□□□ -1.08
AC055717.1-201ENST00000502221 TMEM101Q96IK0 257 aa8.3□□□□□ -1.08
AC055717.1-201ENST00000502221 IGHV7-81A0A0B4J1V7 117 aa8.29□□□□□ -1.08
AC055717.1-201ENST00000502221 CRLF1O75462 422 aa8.29□□□□□ -1.08
AC055717.1-201ENST00000502221 NDPQ00604 133 aa8.29□□□□□ -1.08
AC055717.1-201ENST00000502221 SHISA2Q6UWI4 295 aa8.29□□□□□ -1.08
AC055717.1-201ENST00000502221 SMR3AQ99954 134 aa8.29□□□□□ -1.08
AC055717.1-201ENST00000502221 ARFGEF3Q5TH69 2177 aa8.29□□□□□ -1.08
AC055717.1-201ENST00000502221 DEFB113Q30KQ7 82 aa8.28□□□□□ -1.08
AC055717.1-201ENST00000502221 NSUN5P1Q3KNT7 163 aa8.28□□□□□ -1.08
AC055717.1-201ENST00000502221 MUSTN1Q8IVN3 82 aa8.28□□□□□ -1.08
AC055717.1-201ENST00000502221 ZFAND2AQ8N6M9 145 aa8.28□□□□□ -1.08
AC055717.1-201ENST00000502221 YAE1D1Q9NRH1 226 aa8.28□□□□□ -1.08
AC055717.1-201ENST00000502221 CD3EP07766 207 aa8.28□□□□□ -1.08
AC055717.1-201ENST00000502221 TSPEAR-AS2P59090 65 aa8.28□□□□□ -1.08
AC055717.1-201ENST00000502221 FAM19A4Q96LR4 140 aa8.28□□□□□ -1.08
AC055717.1-201ENST00000502221 KIF25-AS1Q9Y6Z4 181 aa8.28□□□□□ -1.08
AC055717.1-201ENST00000502221 CRIP2P52943 208 aaPredicted RBP8.27□□□□□ -1.09
AC055717.1-201ENST00000502221 ZNRF2Q8NHG8 242 aa8.27□□□□□ -1.09
AC055717.1-201ENST00000502221 ACANP16112 2415 aa8.26□□□□□ -1.09
AC055717.1-201ENST00000502221 TEX49A0A1B0GTD5 131 aa8.26□□□□□ -1.09
AC055717.1-201ENST00000502221 TGFAP01135 160 aa8.26□□□□□ -1.09
AC055717.1-201ENST00000502221 ANXA2RQ3ZCQ2 193 aa8.26□□□□□ -1.09
AC055717.1-201ENST00000502221 PLCE1Q9P212 2302 aa8.26□□□□□ -1.09
AC055717.1-201ENST00000502221 VMO1Q7Z5L0 202 aa8.26□□□□□ -1.09
AC055717.1-201ENST00000502221 ICOSQ9Y6W8 199 aa8.26□□□□□ -1.09
AC055717.1-201ENST00000502221 FAM223BA6NKX1 122 aa8.25□□□□□ -1.09
AC055717.1-201ENST00000502221 IGHV4-39P01824 125 aa8.25□□□□□ -1.09
AC055717.1-201ENST00000502221 LINC00315P59091 139 aa8.25□□□□□ -1.09
AC055717.1-201ENST00000502221 FAM223AQ8IWN6 122 aa8.25□□□□□ -1.09
AC055717.1-201ENST00000502221 Q8N9W7 124 aa8.25□□□□□ -1.09
AC055717.1-201ENST00000502221 H7C423 109 aa8.24□□□□□ -1.09
AC055717.1-201ENST00000502221 TRIAP1O43715 76 aa8.24□□□□□ -1.09
AC055717.1-201ENST00000502221 TIMM17BO60830 172 aa8.24□□□□□ -1.09
AC055717.1-201ENST00000502221 RNASE3P12724 160 aaKnown RBP8.24□□□□□ -1.09
AC055717.1-201ENST00000502221 PRR9Q5T870 116 aa8.24□□□□□ -1.09
AC055717.1-201ENST00000502221 CLEC19AQ6UXS0 136 aa8.24□□□□□ -1.09
AC055717.1-201ENST00000502221 CCDC140Q96MF4 163 aa8.24□□□□□ -1.09
AC055717.1-201ENST00000502221 A0A0J9YXY3 114 aa8.24□□□□□ -1.09
AC055717.1-201ENST00000502221 LST1O00453 97 aa8.24□□□□□ -1.09
AC055717.1-201ENST00000502221 RNASE4P34096 147 aaKnown RBP8.24□□□□□ -1.09
AC055717.1-201ENST00000502221 ZNF56Q15929 161 aa8.24□□□□□ -1.09
AC055717.1-201ENST00000502221 SUMO4Q6EEV6 95 aa8.24□□□□□ -1.09
AC055717.1-201ENST00000502221 COPS9Q8WXC6 57 aa8.24□□□□□ -1.09
AC055717.1-201ENST00000502221 DNAJC30Q96LL9 226 aa8.24□□□□□ -1.09
AC055717.1-201ENST00000502221 NF1P21359 2839 aa8.23□□□□□ -1.09
AC055717.1-201ENST00000502221 ZNF22P17026 224 aaPredicted RBP8.23□□□□□ -1.09
AC055717.1-201ENST00000502221 PRB3Q04118 309 aaPredicted RBP8.23□□□□□ -1.09
AC055717.1-201ENST00000502221 Q6ZQT7 251 aa8.23□□□□□ -1.09
AC055717.1-201ENST00000502221 SETD2Q9BYW2 2564 aaPredicted RBP8.23□□□□□ -1.09
AC055717.1-201ENST00000502221 UBTD1Q9HAC8 227 aa8.23□□□□□ -1.09
AC055717.1-201ENST00000502221 ZNF256Q9Y2P7 627 aaPredicted RBP8.23□□□□□ -1.09
AC055717.1-201ENST00000502221 PYGO1Q9Y3Y4 419 aa8.23□□□□□ -1.09
AC055717.1-201ENST00000502221 H7C2G1 150 aa8.22□□□□□ -1.09
AC055717.1-201ENST00000502221 CXCL5P42830 114 aa8.22□□□□□ -1.09
AC055717.1-201ENST00000502221 BEX4Q9NWD9 120 aaPredicted RBP8.22□□□□□ -1.09
AC055717.1-201ENST00000502221 FLNAP21333 2647 aaKnown RBP8.22□□□□□ -1.09
AC055717.1-201ENST00000502221 MTORP42345 2549 aa8.22□□□□□ -1.09
AC055717.1-201ENST00000502221 IGHV3OR16-8A0A075B7F1 116 aa8.22□□□□□ -1.09
AC055717.1-201ENST00000502221 IGHV3-35A0A0C4DH35 117 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms