RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 ANXA2RQ3ZCQ2 193 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 PRR9Q5T870 116 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 C9orf66Q5T8R8 295 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 GDF5OSQ5U4N7 250 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 ZNF493Q6ZR52 646 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 STHQ8IWL8 128 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 GATD1Q8NB37 220 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 MCRIP2Q9BUT9 160 aaKnown RBP3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 ZNF256Q9Y2P7 627 aaPredicted RBP3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 LAMTOR2Q9Y2Q5 125 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 PAM16Q9Y3D7 125 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 HERC1Q15751 4861 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 IGHV4-4A0A075B6R2 117 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 IGHV1OR15-1A0A075B7D0 117 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 SNAI2O43623 268 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 NUPR1O60356 82 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 ZNF324O75467 553 aaPredicted RBP3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 OR5AL1P0C617 328 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 IGLC3P0DOY3 106 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 NTF3P20783 257 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 KRTAP5-9P26371 169 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 AMTP48728 403 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 UBE2V1Q13404 147 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 KIAA1644Q3SXP7 199 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 SPATA45Q537H7 98 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 MUC21Q5SSG8 566 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 SPANXN1Q5VSR9 72 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 AMTNQ6UX39 209 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 Q6ZN92 141 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 TMEM191AQ9H0A3 160 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 TP53TG3Q9ULZ0 132 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 PHLDA3Q9Y5J5 127 aa3.88□□□□□ -1.79
HMGXB4-208ENST00000498325 STARD9Q9P2P6 4700 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 TRAV9-2A0A087WT02 112 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 LOC102724200A0A096LPH7 203 aaPredicted RBP3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 F5H697 171 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 H3BVH4 76 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 M0R2Z0 102 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 GNRH2O43555 120 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 CD7P09564 240 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 PMCHP20382 165 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 MT3P25713 68 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 SRIP30626 198 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 KRTDAPP60985 99 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 SLAQ13239 276 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 BATFQ16520 125 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 SPINK13Q1W4C9 94 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 ODF3L2Q3SX64 289 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 TDRG1Q3Y452 100 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 FAM104BQ5XKR9 115 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 Q8N976 141 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 ALKBH7Q9BT30 221 aaPredicted RBP3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 CNFNQ9BYD5 112 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 DNAH7Q8WXX0 4024 aa3.87□□□□□ -1.79
HMGXB4-208ENST00000498325 TRAV12-2A0A075B6T6 113 aa3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 MUC21A0A0G2JKD1 596 aa3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 MUC21A0A140T8X8 626 aa3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 CBY3A6NI87 242 aa3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 INSP01308 110 aa3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 PPBPP02775 128 aa3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 CKS2P33552 79 aa3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 FXYD7P58549 80 aa3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 NANOS2P60321 138 aaKnown RBP3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 DEFB121Q5J5C9 76 aa3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 MORN3Q6PF18 240 aaPredicted RBP3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 Q6ZQT7 251 aa3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 TRPT1Q86TN4 253 aaKnown RBP3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 GTSCR1Q86UQ5 136 aa3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 WFDC9Q8NEX5 89 aa3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 OR10AG1Q8NH19 301 aa3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 LINC00467Q9BRT7 94 aa3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 C1QTNF4Q9BXJ3 329 aa3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 ST20Q9HBF5 79 aa3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 SCRT2Q9NQ03 307 aa3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 TIMM8BQ9Y5J9 83 aaPredicted RBP3.86□□□□□ -1.79
HMGXB4-208ENST00000498325 IGHV3-16A0A0C4DH30 117 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 M0R381 172 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 CRXO43186 299 aaPredicted RBP3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 HSBP1O75506 76 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 C3orf79P0CE67 100 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 SMIM17P0DL12 118 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 RNASE3P12724 160 aaKnown RBP3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 RBX1P62877 108 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 MRPL51Q4U2R6 128 aaKnown RBP3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 NIT1Q86X76 327 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 AMN1Q8IY45 258 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 ORMDL3Q8N138 153 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 STPG4Q8N801 248 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 OR4C5Q8NGB2 326 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 MUC7Q8TAX7 377 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 C18orf32Q8TCD1 76 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 CHCHD1Q96BP2 118 aaKnown RBP3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 PRELID3AQ96N28 172 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 AP1S3Q96PC3 154 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 LINC01587Q99440 93 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 PMCHL2Q9BQD1 86 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 DPH3P1Q9H4G8 78 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 MSRB1Q9NZV6 116 aa3.85□□□□□ -1.79
HMGXB4-208ENST00000498325 MDFICQ9P1T7 246 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms