RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 A0A0J9YX75 114 aa9.24□□□□□ -0.93
AFF3-215ENST00000498090 TRBV27A0A0K0K1C4 114 aa9.24□□□□□ -0.93
AFF3-215ENST00000498090 TMEM238LA0A1B0GVL6 79 aa9.24□□□□□ -0.93
AFF3-215ENST00000498090 A0A1B0GWB2 263 aa9.24□□□□□ -0.93
AFF3-215ENST00000498090 A6NJY4 79 aa9.24□□□□□ -0.93
AFF3-215ENST00000498090 NDUFA7O95182 113 aa9.24□□□□□ -0.93
AFF3-215ENST00000498090 CD7P09564 240 aa9.24□□□□□ -0.93
AFF3-215ENST00000498090 NHP2Q9NX24 153 aaKnown RBP9.24□□□□□ -0.93
AFF3-215ENST00000498090 TRBV7-3A0A075B6L6 115 aa9.23□□□□□ -0.93
AFF3-215ENST00000498090 K7EQG2 157 aa9.23□□□□□ -0.93
AFF3-215ENST00000498090 LGALS1P09382 135 aaKnown RBP9.23□□□□□ -0.93
AFF3-215ENST00000498090 DEFB1P60022 68 aa9.23□□□□□ -0.93
AFF3-215ENST00000498090 PMVKQ15126 192 aa9.23□□□□□ -0.93
AFF3-215ENST00000498090 KRTAP21-3Q3LHN1 58 aa9.23□□□□□ -0.93
AFF3-215ENST00000498090 SUMO4Q6EEV6 95 aa9.23□□□□□ -0.93
AFF3-215ENST00000498090 ZFP2Q6ZN57 461 aa9.23□□□□□ -0.93
AFF3-215ENST00000498090 LINC01006Q8NI28 216 aa9.23□□□□□ -0.93
AFF3-215ENST00000498090 IGHV3-16A0A0C4DH30 117 aa9.23□□□□□ -0.93
AFF3-215ENST00000498090 IGIPA6NJ69 53 aa9.23□□□□□ -0.93
AFF3-215ENST00000498090 RHOHQ15669 191 aa9.23□□□□□ -0.93
AFF3-215ENST00000498090 C12orf74Q32Q52 190 aa9.23□□□□□ -0.93
AFF3-215ENST00000498090 TRGV11A0A075B6L2 103 aa9.22□□□□□ -0.93
AFF3-215ENST00000498090 TRAV12-3A0A0B4J271 114 aa9.22□□□□□ -0.93
AFF3-215ENST00000498090 IGLL5B9A064 214 aa9.22□□□□□ -0.93
AFF3-215ENST00000498090 FOXI2Q6ZQN5 318 aa9.22□□□□□ -0.93
AFF3-215ENST00000498090 UBE2E2Q96LR5 201 aa9.22□□□□□ -0.93
AFF3-215ENST00000498090 PRADC1Q9BSG0 188 aa9.22□□□□□ -0.93
AFF3-215ENST00000498090 TP53TG1Q9Y2A0 90 aa9.22□□□□□ -0.93
AFF3-215ENST00000498090 IGHV1OR15-1A0A075B7D0 117 aa9.21□□□□□ -0.93
AFF3-215ENST00000498090 F5H697 171 aa9.21□□□□□ -0.93
AFF3-215ENST00000498090 F8W1H4 67 aa9.21□□□□□ -0.93
AFF3-215ENST00000498090 G3V4G9 280 aa9.21□□□□□ -0.93
AFF3-215ENST00000498090 TCTEX1D4Q5JR98 221 aa9.21□□□□□ -0.93
AFF3-215ENST00000498090 HIST2H2BDQ6DRA6 164 aa9.21□□□□□ -0.93
AFF3-215ENST00000498090 TRPT1Q86TN4 253 aaKnown RBP9.21□□□□□ -0.93
AFF3-215ENST00000498090 ZNF479Q96JC4 524 aa9.21□□□□□ -0.93
AFF3-215ENST00000498090 SDHAF1A6NFY7 115 aa9.2□□□□□ -0.94
AFF3-215ENST00000498090 ZNF688P0C7X2 276 aa9.2□□□□□ -0.94
AFF3-215ENST00000498090 NSUN5P1Q3KNT7 163 aa9.2□□□□□ -0.94
AFF3-215ENST00000498090 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.2□□□□□ -0.94
AFF3-215ENST00000498090 NAA38Q9BRA0 125 aaKnown RBP9.2□□□□□ -0.94
AFF3-215ENST00000498090 EDA2RQ9HAV5 297 aa9.2□□□□□ -0.94
AFF3-215ENST00000498090 TRAV2A0A0B4J234 112 aa9.2□□□□□ -0.94
AFF3-215ENST00000498090 C11orf86A6NJI1 115 aa9.2□□□□□ -0.94
AFF3-215ENST00000498090 ZNF815PA8K554 130 aa9.2□□□□□ -0.94
AFF3-215ENST00000498090 K7ERJ3 54 aa9.2□□□□□ -0.94
AFF3-215ENST00000498090 SPRY2O43597 315 aa9.2□□□□□ -0.94
AFF3-215ENST00000498090 PROK1P58294 105 aa9.2□□□□□ -0.94
AFF3-215ENST00000498090 ZNF256Q9Y2P7 627 aaPredicted RBP9.2□□□□□ -0.94
AFF3-215ENST00000498090 CRYGDP07320 174 aa9.19□□□□□ -0.94
AFF3-215ENST00000498090 RRN3P1Q2M238 152 aa9.19□□□□□ -0.94
AFF3-215ENST00000498090 PIK3CD-AS1Q5SR53 167 aa9.19□□□□□ -0.94
AFF3-215ENST00000498090 COL6A5A8TX70 2615 aa9.18□□□□□ -0.94
AFF3-215ENST00000498090 IGLV4-69A0A075B6H9 119 aa9.18□□□□□ -0.94
AFF3-215ENST00000498090 A0A087WWL8 130 aa9.18□□□□□ -0.94
AFF3-215ENST00000498090 M0QY20 66 aa9.18□□□□□ -0.94
AFF3-215ENST00000498090 COTL1Q14019 142 aa9.18□□□□□ -0.94
AFF3-215ENST00000498090 ZNF876PQ49A33 203 aa9.18□□□□□ -0.94
AFF3-215ENST00000498090 SCGB1D4Q6XE38 83 aa9.18□□□□□ -0.94
AFF3-215ENST00000498090 C18orf65Q6ZTR6 163 aa9.18□□□□□ -0.94
AFF3-215ENST00000498090 Q8N1Y9 231 aa9.18□□□□□ -0.94
AFF3-215ENST00000498090 MDFIQ99750 246 aa9.18□□□□□ -0.94
AFF3-215ENST00000498090 J3QR89 54 aa9.17□□□□□ -0.94
AFF3-215ENST00000498090 TSHBP01222 138 aa9.17□□□□□ -0.94
AFF3-215ENST00000498090 CD28P10747 220 aa9.17□□□□□ -0.94
AFF3-215ENST00000498090 ZNF56Q15929 161 aa9.17□□□□□ -0.94
AFF3-215ENST00000498090 SPANXB1Q9NS25 103 aaPredicted RBP9.17□□□□□ -0.94
AFF3-215ENST00000498090 DNHD1Q96M86 4753 aa9.17□□□□□ -0.94
AFF3-215ENST00000498090 EDN2P20800 178 aa9.16□□□□□ -0.94
AFF3-215ENST00000498090 SYNJ2BPP57105 145 aa9.16□□□□□ -0.94
AFF3-215ENST00000498090 KRTAP10-3P60369 221 aa9.16□□□□□ -0.94
AFF3-215ENST00000498090 LYRM7Q5U5X0 104 aa9.16□□□□□ -0.94
AFF3-215ENST00000498090 NFE4Q86UQ8 179 aa9.16□□□□□ -0.94
AFF3-215ENST00000498090 C11orf44Q8N8P7 122 aa9.16□□□□□ -0.94
AFF3-215ENST00000498090 A8MTW9 85 aa9.16□□□□□ -0.94
AFF3-215ENST00000498090 I3L3M4 83 aa9.16□□□□□ -0.94
AFF3-215ENST00000498090 SAP30O75446 220 aa9.16□□□□□ -0.94
AFF3-215ENST00000498090 HOXD3P31249 432 aaPredicted RBP9.16□□□□□ -0.94
AFF3-215ENST00000498090 CRYBA4P53673 196 aa9.16□□□□□ -0.94
AFF3-215ENST00000498090 SRSF9Q13242 221 aaKnown RBP eCLIP9.16□□□□□ -0.94
AFF3-215ENST00000498090 PTH2Q96A98 100 aa9.16□□□□□ -0.94
AFF3-215ENST00000498090 JPT2Q9H910 190 aa9.16□□□□□ -0.94
AFF3-215ENST00000498090 MDFICQ9P1T7 246 aa9.16□□□□□ -0.94
AFF3-215ENST00000498090 KRTAP24-1Q3LI83 254 aa9.15□□□□□ -0.94
AFF3-215ENST00000498090 FAM74A4Q5TZK3 123 aa9.15□□□□□ -0.94
AFF3-215ENST00000498090 AMTNQ6UX39 209 aa9.15□□□□□ -0.94
AFF3-215ENST00000498090 UBE2D1P51668 147 aa9.14□□□□□ -0.95
AFF3-215ENST00000498090 SPINK13Q1W4C9 94 aa9.14□□□□□ -0.95
AFF3-215ENST00000498090 CD300EQ496F6 205 aaPredicted RBP9.14□□□□□ -0.95
AFF3-215ENST00000498090 KHDC1LQ5JSQ8 128 aa9.14□□□□□ -0.95
AFF3-215ENST00000498090 CITED2Q99967 270 aaPredicted RBP9.14□□□□□ -0.95
AFF3-215ENST00000498090 PEMTQ9UBM1 199 aa9.14□□□□□ -0.95
AFF3-215ENST00000498090 TRAV12-2A0A075B6T6 113 aa9.13□□□□□ -0.95
AFF3-215ENST00000498090 C20orf203Q8NBC4 194 aa9.13□□□□□ -0.95
AFF3-215ENST00000498090 WFDC12Q8WWY7 111 aa9.13□□□□□ -0.95
AFF3-215ENST00000498090 A0A0J9YY99 117 aa9.13□□□□□ -0.95
AFF3-215ENST00000498090 ADARB2-AS1A8MUL3 147 aa9.13□□□□□ -0.95
AFF3-215ENST00000498090 RPL39P62891 51 aaKnown RBP9.13□□□□□ -0.95
AFF3-215ENST00000498090 C21orf62-AS1Q17RA5 79 aa9.13□□□□□ -0.95
AFF3-215ENST00000498090 DEFB136Q30KP8 78 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms