RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 FOXC2Q99958 501 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 SMIM7Q9BQ49 75 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 SEC11CQ9BY50 192 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 MS4A6AQ9H2W1 248 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 RPP21Q9H633 154 aaKnown RBP1.54□□□□□ -2.16
RIF1-212ENST00000498041 FKBP11Q9NYL4 201 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 PEF1Q9UBV8 284 aaKnown RBP1.54□□□□□ -2.16
RIF1-212ENST00000498041 VPREB3Q9UKI3 123 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 KLF12Q9Y4X4 402 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 ARL2-SNX15V9GYD0 113 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 HERC2O95714 4834 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 SONP18583 2426 aaKnown RBP1.54□□□□□ -2.16
RIF1-212ENST00000498041 TRAV12-3A0A0B4J271 114 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 LOC389332A0A1B0GUA5 103 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 A0A1B0GVX0 72 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 SERTM2A0A1B0GWG4 89 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 C19orf71A6NCJ1 209 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 PCP4L1A6NKN8 68 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 C17orf112F2Z3M2 114 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 GATCO43716 136 aaKnown RBP1.53□□□□□ -2.16
RIF1-212ENST00000498041 HIST1H2BKO60814 126 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 HIST1H2BJP06899 126 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 PET100P0DJ07 73 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 HIST1H1EP10412 219 aaKnown RBP1.53□□□□□ -2.16
RIF1-212ENST00000498041 HIST1H1BP16401 226 aaKnown RBP1.53□□□□□ -2.16
RIF1-212ENST00000498041 RAB5AP20339 215 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 HIST1H2BOP23527 126 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 HIST1H2BBP33778 126 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 PSMB3P49720 205 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 HIST1H2BDP58876 126 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 YPEL3P61236 119 aaPredicted RBP1.53□□□□□ -2.16
RIF1-212ENST00000498041 HIST1H2BCP62807 126 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 SERF2P84101 59 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 HIST1H1AQ02539 215 aaPredicted RBP1.53□□□□□ -2.16
RIF1-212ENST00000498041 PSG3Q16557 428 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 HIST2H2BEQ16778 126 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 KLK9Q2XQG4 91 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 DEFB114Q30KQ6 69 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 PSMG4Q5JS54 123 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.53□□□□□ -2.16
RIF1-212ENST00000498041 Q5W150 140 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 MORN3Q6PF18 240 aaPredicted RBP1.53□□□□□ -2.16
RIF1-212ENST00000498041 SLC25A34Q6PIV7 304 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 LYZL1Q6UWQ5 148 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 AMTNQ6UX39 209 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 TMEM136Q6ZRR5 245 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 Q86TA4 180 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 C1orf158Q8N1D5 194 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 LRRC75A-AS1Q8N1F1 130 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 ZFAND2AQ8N6M9 145 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 NUP35Q8NFH5 326 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 OR4B1Q8NGF8 309 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 VSTM2AQ8TAG5 236 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 MYOZ3Q8TDC0 251 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 DCANP1Q8TF63 244 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 HIST1H2BHQ93079 126 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 EEF1AKMT3Q96AZ1 226 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 RPL39LQ96EH5 51 aaKnown RBP1.53□□□□□ -2.16
RIF1-212ENST00000498041 HIST1H2BNQ99877 126 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 HIST1H2BMQ99879 126 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 RNF5Q99942 180 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 PMCHL2Q9BQD1 86 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 PRO1933Q9H354 126 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 MANBALQ9NQG1 85 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 KCNIP2Q9NS61 270 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 NAT8Q9UHE5 227 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 RABAC1Q9UI14 185 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 NAGKQ9UJ70 344 aa1.53□□□□□ -2.16
RIF1-212ENST00000498041 USP9YO00507 2555 aaPredicted RBP1.53□□□□□ -2.17
RIF1-212ENST00000498041 SVEP1Q4LDE5 3571 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 OOSP1A8MZH6 123 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 KRBOX1C9JBD0 128 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 FNDC10F2Z333 226 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 K7EMI3 77 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 TCF21O43680 179 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 NPYP01303 97 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 IGHV3-53P01767 116 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 LGALS1P09382 135 aaKnown RBP1.52□□□□□ -2.17
RIF1-212ENST00000498041 RNASE3P12724 160 aaKnown RBP1.52□□□□□ -2.17
RIF1-212ENST00000498041 FABP4P15090 132 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 FUSP35637 526 aaKnown RBP eCLIP1.52□□□□□ -2.17
RIF1-212ENST00000498041 FLI1Q01543 452 aaPredicted RBP1.52□□□□□ -2.17
RIF1-212ENST00000498041 KPRPQ5T749 579 aaPredicted RBP1.52□□□□□ -2.17
RIF1-212ENST00000498041 CEMP1Q6PRD7 247 aaPredicted RBP1.52□□□□□ -2.17
RIF1-212ENST00000498041 UQCC3Q6UW78 93 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 ZNF493Q6ZR52 646 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 AMN1Q8IY45 258 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 ATOH7Q8N100 152 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 Q8N2B8 174 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 ZNF738Q8NE65 137 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 OR2D3Q8NGH3 330 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 OR10AG1Q8NH19 301 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 SFRP2Q96HF1 295 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 FAM19A4Q96LR4 140 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 CHAC1Q9BUX1 264 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 GGACTQ9BVM4 153 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 TTTY13Q9BZ97 58 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 SMCO4Q9NRQ5 59 aa1.52□□□□□ -2.17
RIF1-212ENST00000498041 MRPL16Q9NX20 251 aaKnown RBP1.52□□□□□ -2.17
RIF1-212ENST00000498041 IL36BQ9NZH7 164 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms