RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 C16orf90A8MZG2 172 aa10.45□□□□□ -0.74
NUP50-219ENST00000497960 F5H697 171 aa10.45□□□□□ -0.74
NUP50-219ENST00000497960 K7EP13 123 aa10.45□□□□□ -0.74
NUP50-219ENST00000497960 EVI2AP22794 236 aa10.45□□□□□ -0.74
NUP50-219ENST00000497960 TIRAPP58753 221 aa10.45□□□□□ -0.74
NUP50-219ENST00000497960 RHEBQ15382 184 aa10.45□□□□□ -0.74
NUP50-219ENST00000497960 CLRN3Q8NCR9 226 aa10.45□□□□□ -0.74
NUP50-219ENST00000497960 RAB4BP61018 213 aa10.44□□□□□ -0.74
NUP50-219ENST00000497960 Q6ZSN1 163 aa10.44□□□□□ -0.74
NUP50-219ENST00000497960 WFDC10BQ8IUB3 73 aa10.44□□□□□ -0.74
NUP50-219ENST00000497960 CTDSP1Q9GZU7 261 aa10.44□□□□□ -0.74
NUP50-219ENST00000497960 PKHD1P08F94 4074 aa10.43□□□□□ -0.74
NUP50-219ENST00000497960 DNAH10OSP0CZ25 163 aa10.43□□□□□ -0.74
NUP50-219ENST00000497960 MRPL54Q6P161 138 aaKnown RBP10.43□□□□□ -0.74
NUP50-219ENST00000497960 NFE4Q86UQ8 179 aa10.43□□□□□ -0.74
NUP50-219ENST00000497960 SVBPQ8N300 66 aa10.43□□□□□ -0.74
NUP50-219ENST00000497960 RPS10P5Q9NQ39 176 aa10.43□□□□□ -0.74
NUP50-219ENST00000497960 KIF25-AS1Q9Y6Z4 181 aa10.43□□□□□ -0.74
NUP50-219ENST00000497960 KIAA1109Q2LD37 5005 aa10.43□□□□□ -0.74
NUP50-219ENST00000497960 DNAH11Q96DT5 4516 aa10.43□□□□□ -0.74
NUP50-219ENST00000497960 TRAV8-6A0A0B4J262 113 aa10.42□□□□□ -0.74
NUP50-219ENST00000497960 C7orf77A4D0Y5 90 aa10.42□□□□□ -0.74
NUP50-219ENST00000497960 GAGE12JA6NER3 117 aa10.42□□□□□ -0.74
NUP50-219ENST00000497960 SNAPINO95295 136 aa10.42□□□□□ -0.74
NUP50-219ENST00000497960 GAGE1Q13065 139 aa10.42□□□□□ -0.74
NUP50-219ENST00000497960 GAGE4Q13068 117 aa10.42□□□□□ -0.74
NUP50-219ENST00000497960 GAGE5Q13069 117 aa10.42□□□□□ -0.74
NUP50-219ENST00000497960 GAGE13Q4V321 117 aa10.42□□□□□ -0.74
NUP50-219ENST00000497960 KCNIP4Q6PIL6 250 aa10.42□□□□□ -0.74
NUP50-219ENST00000497960 SPATA12Q7Z6I5 190 aa10.42□□□□□ -0.74
NUP50-219ENST00000497960 C10orf126Q8N4M7 172 aa10.42□□□□□ -0.74
NUP50-219ENST00000497960 HERC2O95714 4834 aa10.41□□□□□ -0.74
NUP50-219ENST00000497960 IGHV3-38A0A0C4DH36 116 aa10.41□□□□□ -0.74
NUP50-219ENST00000497960 A0A1B0GW15 77 aa10.41□□□□□ -0.74
NUP50-219ENST00000497960 H7C1H1 209 aa10.41□□□□□ -0.74
NUP50-219ENST00000497960 HBBP68871 147 aa10.41□□□□□ -0.74
NUP50-219ENST00000497960 SUMO4Q6EEV6 95 aa10.41□□□□□ -0.74
NUP50-219ENST00000497960 ATP6V0E2Q8NHE4 81 aa10.41□□□□□ -0.74
NUP50-219ENST00000497960 A0A087WWC5 75 aa10.4□□□□□ -0.74
NUP50-219ENST00000497960 EREGO14944 169 aa10.4□□□□□ -0.74
NUP50-219ENST00000497960 S100A8P05109 93 aa10.4□□□□□ -0.74
NUP50-219ENST00000497960 S100PP25815 95 aa10.4□□□□□ -0.74
NUP50-219ENST00000497960 CAMPP49913 170 aa10.4□□□□□ -0.74
NUP50-219ENST00000497960 RPL36AP83881 106 aaKnown RBP10.4□□□□□ -0.74
NUP50-219ENST00000497960 OR10J3Q5JRS4 329 aa10.4□□□□□ -0.74
NUP50-219ENST00000497960 Q6ZRN7 208 aaPredicted RBP10.4□□□□□ -0.74
NUP50-219ENST00000497960 ATP5L2Q7Z4Y8 100 aa10.4□□□□□ -0.74
NUP50-219ENST00000497960 RPL36ALQ969Q0 106 aaKnown RBP10.4□□□□□ -0.74
NUP50-219ENST00000497960 TMEM191AQ9H0A3 160 aa10.4□□□□□ -0.74
NUP50-219ENST00000497960 GTSF1LQ9H1H1 148 aa10.4□□□□□ -0.74
NUP50-219ENST00000497960 TNFRSF18Q9Y5U5 241 aa10.4□□□□□ -0.74
NUP50-219ENST00000497960 DYNC1H1Q14204 4646 aaKnown RBP10.39□□□□□ -0.75
NUP50-219ENST00000497960 TRBV10-1A0A0K0K1A3 114 aa10.39□□□□□ -0.75
NUP50-219ENST00000497960 LELP1Q5T871 98 aa10.39□□□□□ -0.75
NUP50-219ENST00000497960 IMMP2LQ96T52 175 aa10.39□□□□□ -0.75
NUP50-219ENST00000497960 TRAV26-2A0A0B4J265 109 aa10.38□□□□□ -0.75
NUP50-219ENST00000497960 A0A1B0GXF2 115 aa10.38□□□□□ -0.75
NUP50-219ENST00000497960 LINC01556Q5JQF7 62 aa10.38□□□□□ -0.75
NUP50-219ENST00000497960 AMN1Q8IY45 258 aa10.38□□□□□ -0.75
NUP50-219ENST00000497960 NEXN-AS1Q8NBZ9 246 aa10.38□□□□□ -0.75
NUP50-219ENST00000497960 BTF3L4Q96K17 158 aa10.38□□□□□ -0.75
NUP50-219ENST00000497960 URGCP-MRPS24S4R325 110 aa10.38□□□□□ -0.75
NUP50-219ENST00000497960 PKD1P98161 4303 aa10.38□□□□□ -0.75
NUP50-219ENST00000497960 LINC00694P0DN24 101 aa10.37□□□□□ -0.75
NUP50-219ENST00000497960 RASL11AQ6T310 242 aa10.37□□□□□ -0.75
NUP50-219ENST00000497960 TMEM242Q9NWH2 141 aa10.37□□□□□ -0.75
NUP50-219ENST00000497960 Q9UF83 564 aa10.37□□□□□ -0.75
NUP50-219ENST00000497960 TRBV7-3A0A075B6L6 115 aa10.36□□□□□ -0.75
NUP50-219ENST00000497960 M0QY20 66 aa10.36□□□□□ -0.75
NUP50-219ENST00000497960 KRTAP10-2P60368 255 aa10.36□□□□□ -0.75
NUP50-219ENST00000497960 TRAV9-1A0A075B6T8 112 aa10.35□□□□□ -0.75
NUP50-219ENST00000497960 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.35□□□□□ -0.75
NUP50-219ENST00000497960 GATD1Q8NB37 220 aa10.35□□□□□ -0.75
NUP50-219ENST00000497960 RNF185Q96GF1 192 aa10.35□□□□□ -0.75
NUP50-219ENST00000497960 IGHV3-30P01768 117 aa10.34□□□□□ -0.75
NUP50-219ENST00000497960 IGHV3-33P01772 117 aa10.34□□□□□ -0.75
NUP50-219ENST00000497960 IGHV3-30-3P0DP02 117 aa10.34□□□□□ -0.75
NUP50-219ENST00000497960 IGHV3-30-5P0DP03 117 aa10.34□□□□□ -0.75
NUP50-219ENST00000497960 RAB4AP20338 218 aa10.34□□□□□ -0.75
NUP50-219ENST00000497960 UBE2D3P61077 147 aa10.34□□□□□ -0.75
NUP50-219ENST00000497960 UBE2D2P62837 147 aa10.34□□□□□ -0.75
NUP50-219ENST00000497960 FAM104BQ5XKR9 115 aa10.34□□□□□ -0.75
NUP50-219ENST00000497960 MRAP2Q96G30 205 aa10.34□□□□□ -0.75
NUP50-219ENST00000497960 DNAJC30Q96LL9 226 aa10.34□□□□□ -0.75
NUP50-219ENST00000497960 PGPEP1Q9NXJ5 209 aa10.34□□□□□ -0.75
NUP50-219ENST00000497960 IBA57-AS1B1ANH7 110 aa10.33□□□□□ -0.76
NUP50-219ENST00000497960 CDK2AP2O75956 126 aa10.33□□□□□ -0.76
NUP50-219ENST00000497960 NCR2O95944 276 aa10.33□□□□□ -0.76
NUP50-219ENST00000497960 RPL39LQ96EH5 51 aaKnown RBP10.33□□□□□ -0.76
NUP50-219ENST00000497960 NIT2Q9NQR4 276 aa10.33□□□□□ -0.76
NUP50-219ENST00000497960 A0A087WTM6 91 aa10.32□□□□□ -0.76
NUP50-219ENST00000497960 SMKR1H3BMG3 65 aa10.32□□□□□ -0.76
NUP50-219ENST00000497960 PSCAO43653 123 aa10.32□□□□□ -0.76
NUP50-219ENST00000497960 MRPL51Q4U2R6 128 aaKnown RBP10.32□□□□□ -0.76
NUP50-219ENST00000497960 FRZBQ92765 325 aa10.32□□□□□ -0.76
NUP50-219ENST00000497960 CDPF1Q6NVV7 123 aa10.31□□□□□ -0.76
NUP50-219ENST00000497960 ATRAIDQ6UW56 229 aa10.31□□□□□ -0.76
NUP50-219ENST00000497960 Q9HAA7 133 aa10.31□□□□□ -0.76
NUP50-219ENST00000497960 CKS2P33552 79 aa10.3□□□□□ -0.76
NUP50-219ENST00000497960 DAZ4Q86SG3 579 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms