RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 CRYM-AS1A6NIL9 109 aa1.71□□□□□ -2.14
VPS36-206ENST00000497149 WFDC2Q14508 124 aa1.71□□□□□ -2.14
VPS36-206ENST00000497149 SPTSSBQ8NFR3 76 aa1.71□□□□□ -2.14
VPS36-206ENST00000497149 RGPD4Q7Z3J3 1758 aa1.71□□□□□ -2.14
VPS36-206ENST00000497149 CASZ1Q86V15 1759 aa1.71□□□□□ -2.14
VPS36-206ENST00000497149 ABCA3Q99758 1704 aa1.71□□□□□ -2.14
VPS36-206ENST00000497149 MARF1Q9Y4F3 1742 aaKnown RBP1.71□□□□□ -2.14
VPS36-206ENST00000497149 TRPM7Q96QT4 1865 aa1.71□□□□□ -2.14
VPS36-206ENST00000497149 PXDNLA1KZ92 1463 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 CUL9Q8IWT3 2517 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 A0A087WXM4 84 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 A0A0G2JQZ4 141 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 B4DSR2 109 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 HCG22E2RYF7 251 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 C5orf67F2Z3F1 127 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 SYS1-DBNDD2H3BUS1 97 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 H3BUT2 72 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 SIX6O95475 246 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 ASAH2BP0C7U1 165 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 SMIM13P0DJ93 91 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 CXCL8P10145 99 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 SPATA45Q537H7 98 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 FRMPD1Q5SYB0 1578 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 C18orf32Q8TCD1 76 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 TIMM21Q9BVV7 248 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 MED13Q9UHV7 2174 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 PI4KAP42356 2102 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 ESPL1Q14674 2120 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 PRDM15P57071 1507 aaPredicted RBP1.7□□□□□ -2.14
VPS36-206ENST00000497149 DOCK11Q5JSL3 2073 aa1.7□□□□□ -2.14
VPS36-206ENST00000497149 RTTNQ86VV8 2226 aa1.69□□□□□ -2.14
VPS36-206ENST00000497149 A0A087WWC5 75 aa1.69□□□□□ -2.14
VPS36-206ENST00000497149 TRAV12-1A0A0B4J245 112 aa1.69□□□□□ -2.14
VPS36-206ENST00000497149 LINC01600Q96MT4 127 aa1.69□□□□□ -2.14
VPS36-206ENST00000497149 LIMD2Q9BT23 127 aa1.69□□□□□ -2.14
VPS36-206ENST00000497149 CDC42SE1Q9NRR8 79 aa1.69□□□□□ -2.14
VPS36-206ENST00000497149 RGPD3A6NKT7 1758 aaPredicted RBP1.69□□□□□ -2.14
VPS36-206ENST00000497149 KIDINS220Q9ULH0 1771 aa1.69□□□□□ -2.14
VPS36-206ENST00000497149 GOLGA3Q08378 1498 aa1.69□□□□□ -2.14
VPS36-206ENST00000497149 NCOA2Q15596 1464 aa1.69□□□□□ -2.14
VPS36-206ENST00000497149 DLG5Q8TDM6 1919 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 HFM1A2PYH4 1435 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 BLMP54132 1417 aaPredicted RBP1.68□□□□□ -2.14
VPS36-206ENST00000497149 SCN11AQ9UI33 1791 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 TRAV23DV6A0A075B6W5 121 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 TMEM30CPA0ZSE6 113 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 NUPR1O60356 82 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 IGHV3-33P01772 117 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 ZNF791Q3KP31 576 aaPredicted RBP1.68□□□□□ -2.14
VPS36-206ENST00000497149 PSMG4Q5JS54 123 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 ZNF818PQ6ZRF7 136 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 CYP2G1PQ6ZSU1 146 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 CLECL1Q8IZS7 167 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 MANBALQ9NQG1 85 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 LINC00474Q9P2X8 69 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 PRO1854Q9UHT4 67 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 C22orf24Q9Y442 160 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 LHFPL6Q9Y693 200 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 KDM6BO15054 1643 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 NLRP1Q9C000 1473 aa1.68□□□□□ -2.14
VPS36-206ENST00000497149 ZC3H13Q5T200 1668 aaKnown RBP1.67□□□□□ -2.14
VPS36-206ENST00000497149 ROBO1Q9Y6N7 1651 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 EDC4Q6P2E9 1401 aaKnown RBP1.67□□□□□ -2.14
VPS36-206ENST00000497149 MGAMO43451 1857 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 TANC1Q9C0D5 1861 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 PLXNA1Q9UIW2 1896 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 PEAK1Q9H792 1746 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 TMSB15BA0A087X1C1 80 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 TRBV7-1A0A0A6YYK4 115 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 C7orf77A4D0Y5 90 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 UMAD1C9J7I0 102 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 F2Z2F3 143 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 COX6CP09669 75 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 TPRXLQ17RH7 258 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 C10orf128Q5T292 105 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 LINC00643Q86TS7 51 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 AMELYQ99218 206 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 DYNLRB1Q9NP97 96 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 PRO2289Q9P1D8 64 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 ATP10BO94823 1461 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 PRRC2BQ5JSZ5 2229 aaKnown RBP1.67□□□□□ -2.14
VPS36-206ENST00000497149 MUC6Q6W4X9 2439 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 CPAMD8Q8IZJ3 1885 aa1.67□□□□□ -2.14
VPS36-206ENST00000497149 DUOX2Q9NRD8 1548 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 ARHGEF12Q9NZN5 1544 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 MYO7AQ13402 2215 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 TRBV7-3A0A075B6L6 115 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 CXorf51AA0A1B0GTR3 108 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 LOC285095A0A1B0GVY8 99 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 PRB1P04280 392 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 CNBPP62633 177 aaKnown RBP1.66□□□□□ -2.14
VPS36-206ENST00000497149 KLKP1Q107X0 134 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 DEFB113Q30KQ7 82 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 TMEM170BQ5T4T1 132 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 LYPD5Q6UWN5 251 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.66□□□□□ -2.14
VPS36-206ENST00000497149 ZCCHC23Q6ZST2 131 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 Q6ZTI0 123 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 FAM167A-AS1Q96KT0 104 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 HIGD1BQ9P298 99 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms