RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 C10orf113Q5VZT2 155 aa5□□□□□ -1.61
HOXA9-206ENST00000497089 ZNF833PQ6ZTB9 187 aa5□□□□□ -1.61
HOXA9-206ENST00000497089 FAM167A-AS1Q96KT0 104 aa5□□□□□ -1.61
HOXA9-206ENST00000497089 S1PR3Q99500 378 aa5□□□□□ -1.61
HOXA9-206ENST00000497089 AAMDCQ9H7C9 122 aa5□□□□□ -1.61
HOXA9-206ENST00000497089 PRNDQ9UKY0 176 aa5□□□□□ -1.61
HOXA9-206ENST00000497089 A0A096LNJ9 63 aa4.99□□□□□ -1.61
HOXA9-206ENST00000497089 TRAV8-4A0A0B4J246 113 aa4.99□□□□□ -1.61
HOXA9-206ENST00000497089 RS1O15537 224 aa4.99□□□□□ -1.61
HOXA9-206ENST00000497089 PLNP26678 52 aa4.99□□□□□ -1.61
HOXA9-206ENST00000497089 IFI27P40305 119 aaPredicted RBP4.99□□□□□ -1.61
HOXA9-206ENST00000497089 UBE2D3P61077 147 aa4.99□□□□□ -1.61
HOXA9-206ENST00000497089 UBE2D2P62837 147 aa4.99□□□□□ -1.61
HOXA9-206ENST00000497089 EGFEM1PQ0D2K5 195 aa4.99□□□□□ -1.61
HOXA9-206ENST00000497089 C2orf83Q53S99 150 aa4.99□□□□□ -1.61
HOXA9-206ENST00000497089 SERTAD4-AS1Q5TG53 156 aa4.99□□□□□ -1.61
HOXA9-206ENST00000497089 RASL10AQ92737 203 aa4.99□□□□□ -1.61
HOXA9-206ENST00000497089 LINC01600Q96MT4 127 aa4.99□□□□□ -1.61
HOXA9-206ENST00000497089 A0A0A0MQY5 61 aa4.98□□□□□ -1.61
HOXA9-206ENST00000497089 TRAV8-2A0A0B4J237 113 aa4.98□□□□□ -1.61
HOXA9-206ENST00000497089 FCGR3BO75015 233 aa4.98□□□□□ -1.61
HOXA9-206ENST00000497089 DUSP14O95147 198 aaKnown RBP4.98□□□□□ -1.61
HOXA9-206ENST00000497089 PSMB8P28062 276 aa4.98□□□□□ -1.61
HOXA9-206ENST00000497089 FCER1GP30273 86 aa4.98□□□□□ -1.61
HOXA9-206ENST00000497089 SUB1P53999 127 aaKnown RBP eCLIP4.98□□□□□ -1.61
HOXA9-206ENST00000497089 BRWD1-AS2P59051 145 aa4.98□□□□□ -1.61
HOXA9-206ENST00000497089 MORN3Q6PF18 240 aaPredicted RBP4.98□□□□□ -1.61
HOXA9-206ENST00000497089 ANKRD29Q8N6D5 301 aa4.98□□□□□ -1.61
HOXA9-206ENST00000497089 NPBQ8NG41 125 aa4.98□□□□□ -1.61
HOXA9-206ENST00000497089 OR1L8Q8NGR8 309 aa4.98□□□□□ -1.61
HOXA9-206ENST00000497089 MYOZ3Q8TDC0 251 aa4.98□□□□□ -1.61
HOXA9-206ENST00000497089 FXYD5Q96DB9 178 aa4.98□□□□□ -1.61
HOXA9-206ENST00000497089 LINC01587Q99440 93 aa4.98□□□□□ -1.61
HOXA9-206ENST00000497089 MRPL20Q9BYC9 149 aaKnown RBP4.98□□□□□ -1.61
HOXA9-206ENST00000497089 NXT2Q9NPJ8 142 aaKnown RBP4.98□□□□□ -1.61
HOXA9-206ENST00000497089 HHLA3Q9XRX5 114 aa4.98□□□□□ -1.61
HOXA9-206ENST00000497089 LOC107984156A0A0G2JMH3 177 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 FAM240AA0A1B0GVK7 77 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 WI2-2373I1.2A0A1W2PRP0 233 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 NDUFA3O95167 84 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 PRB2P02812 416 aaPredicted RBP4.97□□□□□ -1.61
HOXA9-206ENST00000497089 PRSS1P07477 247 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 SAA2P0DJI9 122 aaPredicted RBP4.97□□□□□ -1.61
HOXA9-206ENST00000497089 ORM2P19652 201 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 RPL13AP40429 203 aaKnown RBP4.97□□□□□ -1.61
HOXA9-206ENST00000497089 PRCDQ00LT1 54 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 ZC2HC1BQ5TFG8 222 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 FAM104BQ5XKR9 115 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 C18orf65Q6ZTR6 163 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 Q86TA4 180 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 ARL17AQ8IVW1 177 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 KLHL30-AS1Q8NEE0 82 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 TMEM101Q96IK0 257 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 SGK494Q96LW2 274 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 KIR2DL4Q99706 377 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 RNF5Q99942 180 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 SLC25A39Q9BZJ4 359 aaPredicted RBP4.97□□□□□ -1.61
HOXA9-206ENST00000497089 IMUPQ9GZP8 106 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 OTORQ9NRC9 128 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 TMEM14BQ9NUH8 114 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 LINC00527Q9UJ94 153 aa4.97□□□□□ -1.61
HOXA9-206ENST00000497089 PRKDCP78527 4128 aaKnown RBP4.96□□□□□ -1.61
HOXA9-206ENST00000497089 IGKV2D-26A0A0A0MRZ7 120 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 IGHV7-81A0A0B4J1V7 117 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 TRAV2A0A0B4J234 112 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 TRAV4A0A0B4J268 109 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 TRBV7-7A0A0K0K1E9 115 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 PGPA6NDG6 321 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 CGB1A6NKQ9 187 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 C9JAW5 83 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 D6R8Y8 96 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 CCL24O00175 119 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 NBR2O15453 112 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 TCRAP04437 139 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 LGALS1P09382 135 aaKnown RBP4.96□□□□□ -1.62
HOXA9-206ENST00000497089 UBE2D1P51668 147 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 CRIP2P52943 208 aaPredicted RBP4.96□□□□□ -1.62
HOXA9-206ENST00000497089 C9orf153Q5TBE3 101 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 GTSCR1Q86UQ5 136 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 C15orf53Q8NAA6 179 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 ZNRF2Q8NHG8 242 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 C4orf3Q8WVX3 66 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 TRGV9Q99603 122 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 HIGD1AQ9Y241 93 aa4.96□□□□□ -1.62
HOXA9-206ENST00000497089 LOC389332A0A1B0GUA5 103 aa4.95□□□□□ -1.62
HOXA9-206ENST00000497089 K7EIL1 84 aa4.95□□□□□ -1.62
HOXA9-206ENST00000497089 M0R2P5 195 aa4.95□□□□□ -1.62
HOXA9-206ENST00000497089 UQCRQO14949 82 aa4.95□□□□□ -1.62
HOXA9-206ENST00000497089 ATP6V0E1O15342 81 aa4.95□□□□□ -1.62
HOXA9-206ENST00000497089 SLC25A20O43772 301 aa4.95□□□□□ -1.62
HOXA9-206ENST00000497089 ARMS2P0C7Q2 107 aa4.95□□□□□ -1.62
HOXA9-206ENST00000497089 CNTFRP26992 372 aa4.95□□□□□ -1.62
HOXA9-206ENST00000497089 EMP1P54849 157 aa4.95□□□□□ -1.62
HOXA9-206ENST00000497089 KRTAP10-11P60412 298 aa4.95□□□□□ -1.62
HOXA9-206ENST00000497089 GNG5P63218 68 aa4.95□□□□□ -1.62
HOXA9-206ENST00000497089 RPL39P5Q59GN2 51 aa4.95□□□□□ -1.62
HOXA9-206ENST00000497089 PIK3CD-AS1Q5SR53 167 aa4.95□□□□□ -1.62
HOXA9-206ENST00000497089 C10orf126Q8N4M7 172 aa4.95□□□□□ -1.62
HOXA9-206ENST00000497089 C3orf22Q8N5N4 141 aa4.95□□□□□ -1.62
HOXA9-206ENST00000497089 SRSF12Q8WXF0 261 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms