RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 CORTO00230 105 aa0.61□□□□□ -2.31
TARDBP-210ENST00000496840 SIX6O95475 246 aa0.61□□□□□ -2.31
TARDBP-210ENST00000496840 TPPP2P59282 170 aa0.61□□□□□ -2.31
TARDBP-210ENST00000496840 C9orf153Q5TBE3 101 aa0.61□□□□□ -2.31
TARDBP-210ENST00000496840 SPATA8Q6RVD6 105 aa0.61□□□□□ -2.31
TARDBP-210ENST00000496840 AQP10Q96PS8 301 aa0.61□□□□□ -2.31
TARDBP-210ENST00000496840 MYH13Q9UKX3 1938 aa0.61□□□□□ -2.31
TARDBP-210ENST00000496840 CASKIN1Q8WXD9 1431 aa0.61□□□□□ -2.31
TARDBP-210ENST00000496840 NINQ8N4C6 2090 aa0.61□□□□□ -2.31
TARDBP-210ENST00000496840 PHLPP1O60346 1717 aa0.61□□□□□ -2.31
TARDBP-210ENST00000496840 KTN1Q86UP2 1357 aaKnown RBP0.6□□□□□ -2.31
TARDBP-210ENST00000496840 ACYP2P14621 99 aa0.6□□□□□ -2.31
TARDBP-210ENST00000496840 GNG4P50150 75 aa0.6□□□□□ -2.31
TARDBP-210ENST00000496840 MRPS10P82664 201 aaKnown RBP0.6□□□□□ -2.31
TARDBP-210ENST00000496840 C10orf128Q5T292 105 aa0.6□□□□□ -2.31
TARDBP-210ENST00000496840 Q96NJ1 140 aa0.6□□□□□ -2.31
TARDBP-210ENST00000496840 PLXNA2O75051 1894 aa0.6□□□□□ -2.31
TARDBP-210ENST00000496840 WDR7Q9Y4E6 1490 aa0.6□□□□□ -2.31
TARDBP-210ENST00000496840 MUC22E2RYF6 1773 aaPredicted RBP0.6□□□□□ -2.31
TARDBP-210ENST00000496840 ZNF462Q96JM2 2506 aa0.6□□□□□ -2.31
TARDBP-210ENST00000496840 TRGV1A0A0A0MS02 117 aa0.59□□□□□ -2.31
TARDBP-210ENST00000496840 OOSP1A8MZH6 123 aa0.59□□□□□ -2.31
TARDBP-210ENST00000496840 TNFP01375 233 aa0.59□□□□□ -2.31
TARDBP-210ENST00000496840 SMIM6P0DI80 62 aa0.59□□□□□ -2.31
TARDBP-210ENST00000496840 PPP3R1P63098 170 aa0.59□□□□□ -2.31
TARDBP-210ENST00000496840 WHAMMP3Q1A5X7 153 aa0.59□□□□□ -2.31
TARDBP-210ENST00000496840 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.59□□□□□ -2.31
TARDBP-210ENST00000496840 C8orf59Q8N0T1 100 aaPredicted RBP0.59□□□□□ -2.31
TARDBP-210ENST00000496840 TTC9CQ8N5M4 171 aa0.59□□□□□ -2.31
TARDBP-210ENST00000496840 BPESC1Q9GZL8 116 aa0.59□□□□□ -2.31
TARDBP-210ENST00000496840 FRAS1Q86XX4 4008 aa0.59□□□□□ -2.32
TARDBP-210ENST00000496840 A2ML1A8K2U0 1454 aa0.59□□□□□ -2.32
TARDBP-210ENST00000496840 BCL9LQ86UU0 1499 aa0.59□□□□□ -2.32
TARDBP-210ENST00000496840 AFDNP55196 1824 aaKnown RBP0.59□□□□□ -2.32
TARDBP-210ENST00000496840 ZNF142P52746 1687 aaPredicted RBP0.59□□□□□ -2.32
TARDBP-210ENST00000496840 SPAG17Q6Q759 2223 aa0.58□□□□□ -2.32
TARDBP-210ENST00000496840 MYH6P13533 1939 aa0.58□□□□□ -2.32
TARDBP-210ENST00000496840 SPTBP11277 2137 aa0.58□□□□□ -2.32
TARDBP-210ENST00000496840 GVQW2A0A096LPI5 108 aaPredicted RBP0.58□□□□□ -2.32
TARDBP-210ENST00000496840 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
TARDBP-210ENST00000496840 C5orf38Q86SI9 138 aa0.58□□□□□ -2.32
TARDBP-210ENST00000496840 SMIM11BQ8TCY0 68 aa0.58□□□□□ -2.32
TARDBP-210ENST00000496840 FAM103A1Q9BTL3 118 aaKnown RBP0.58□□□□□ -2.32
TARDBP-210ENST00000496840 PRR15LQ9BU68 103 aa0.58□□□□□ -2.32
TARDBP-210ENST00000496840 SCP2D1Q9UJQ7 156 aa0.58□□□□□ -2.32
TARDBP-210ENST00000496840 BCORL1Q5H9F3 1711 aa0.58□□□□□ -2.32
TARDBP-210ENST00000496840 ATG2AQ2TAZ0 1938 aa0.58□□□□□ -2.32
TARDBP-210ENST00000496840 AKAP11Q9UKA4 1901 aa0.58□□□□□ -2.32
TARDBP-210ENST00000496840 RBBP6Q7Z6E9 1792 aaKnown RBP0.57□□□□□ -2.32
TARDBP-210ENST00000496840 TRAV1-2A0A0B4J238 106 aa0.57□□□□□ -2.32
TARDBP-210ENST00000496840 TMEM14DPA8MWL7 114 aa0.57□□□□□ -2.32
TARDBP-210ENST00000496840 PPP1R17O96001 155 aa0.57□□□□□ -2.32
TARDBP-210ENST00000496840 S100PP25815 95 aa0.57□□□□□ -2.32
TARDBP-210ENST00000496840 SPINK7P58062 85 aa0.57□□□□□ -2.32
TARDBP-210ENST00000496840 VMO1Q7Z5L0 202 aa0.57□□□□□ -2.32
TARDBP-210ENST00000496840 SVBPQ8N300 66 aa0.57□□□□□ -2.32
TARDBP-210ENST00000496840 WFDC6Q9BQY6 131 aa0.57□□□□□ -2.32
TARDBP-210ENST00000496840 SPANXDQ9BXN6 97 aa0.57□□□□□ -2.32
TARDBP-210ENST00000496840 IER3IP1Q9Y5U9 82 aa0.57□□□□□ -2.32
TARDBP-210ENST00000496840 FOCADQ5VW36 1801 aa0.57□□□□□ -2.32
TARDBP-210ENST00000496840 SPEF2Q9C093 1822 aa0.57□□□□□ -2.32
TARDBP-210ENST00000496840 CPSF1Q10570 1443 aaKnown RBP0.56□□□□□ -2.32
TARDBP-210ENST00000496840 MYOM2P54296 1465 aa0.56□□□□□ -2.32
TARDBP-210ENST00000496840 LAMB1P07942 1786 aa0.56□□□□□ -2.32
TARDBP-210ENST00000496840 C20orf202A1L168 122 aa0.56□□□□□ -2.32
TARDBP-210ENST00000496840 FAM24AA6NFZ4 105 aa0.56□□□□□ -2.32
TARDBP-210ENST00000496840 PHGR1C9JFL3 82 aa0.56□□□□□ -2.32
TARDBP-210ENST00000496840 SSSCA1O60232 199 aa0.56□□□□□ -2.32
TARDBP-210ENST00000496840 SPAG11BQ08648 103 aa0.56□□□□□ -2.32
TARDBP-210ENST00000496840 SPAG11AQ6PDA7 123 aa0.56□□□□□ -2.32
TARDBP-210ENST00000496840 Q6ZRX8 168 aa0.56□□□□□ -2.32
TARDBP-210ENST00000496840 GTF2H5Q6ZYL4 71 aa0.56□□□□□ -2.32
TARDBP-210ENST00000496840 COMMD6Q7Z4G1 85 aa0.56□□□□□ -2.32
TARDBP-210ENST00000496840 BAGE3Q86Y29 109 aa0.56□□□□□ -2.32
TARDBP-210ENST00000496840 TSLPQ969D9 159 aa0.56□□□□□ -2.32
TARDBP-210ENST00000496840 CYP4F30PQ9H0H9 118 aa0.56□□□□□ -2.32
TARDBP-210ENST00000496840 R4GMQ9 66 aa0.56□□□□□ -2.32
TARDBP-210ENST00000496840 KDM6BO15054 1643 aa0.56□□□□□ -2.32
TARDBP-210ENST00000496840 PPIP5K1Q6PFW1 1433 aa0.55□□□□□ -2.32
TARDBP-210ENST00000496840 NALCNQ8IZF0 1738 aa0.55□□□□□ -2.32
TARDBP-210ENST00000496840 NRXN2Q9P2S2 1712 aa0.55□□□□□ -2.32
TARDBP-210ENST00000496840 CDK13Q14004 1512 aaKnown RBP0.55□□□□□ -2.32
TARDBP-210ENST00000496840 EIF4G3O43432 1585 aaKnown RBP0.55□□□□□ -2.32
TARDBP-210ENST00000496840 PRH1P02810 166 aa0.55□□□□□ -2.32
TARDBP-210ENST00000496840 IFITM1P13164 125 aa0.55□□□□□ -2.32
TARDBP-210ENST00000496840 GCHFRP30047 84 aa0.55□□□□□ -2.32
TARDBP-210ENST00000496840 CCL18P55774 89 aa0.55□□□□□ -2.32
TARDBP-210ENST00000496840 MYOZ3Q8TDC0 251 aa0.55□□□□□ -2.32
TARDBP-210ENST00000496840 LINC00474Q9P2X8 69 aa0.55□□□□□ -2.32
TARDBP-210ENST00000496840 LENEPQ9Y5L5 61 aa0.55□□□□□ -2.32
TARDBP-210ENST00000496840 ZDBF2Q9HCK1 2354 aa0.55□□□□□ -2.32
TARDBP-210ENST00000496840 LOC285556D6RIA3 1793 aa0.55□□□□□ -2.32
TARDBP-210ENST00000496840 ABCA4P78363 2273 aa0.54□□□□□ -2.32
TARDBP-210ENST00000496840 UBE2L5PA0A1B0GUS4 154 aa0.54□□□□□ -2.32
TARDBP-210ENST00000496840 M0R135 149 aa0.54□□□□□ -2.32
TARDBP-210ENST00000496840 UBE2L3P68036 154 aaKnown RBP0.54□□□□□ -2.32
TARDBP-210ENST00000496840 CGREF1Q99674 301 aa0.54□□□□□ -2.32
TARDBP-210ENST00000496840 TCEAL7Q9BRU2 100 aa0.54□□□□□ -2.32
TARDBP-210ENST00000496840 DPH3P1Q9H4G8 78 aa0.54□□□□□ -2.32
TARDBP-210ENST00000496840 V9GYH0 126 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms