RNA–Protein interactions for RNA: ENST00000496636.1

SH3D21-204, Transcript of SH3 domain containing 21, humanhuman

TSL 3

Gene SH3D21, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-204ENST00000496636 IGHV3-30P01768 117 aa6.34□□□□□ -1.39
SH3D21-204ENST00000496636 IGHV3-33P01772 117 aa6.34□□□□□ -1.39
SH3D21-204ENST00000496636 IGHV3-30-3P0DP02 117 aa6.34□□□□□ -1.39
SH3D21-204ENST00000496636 IGHV3-30-5P0DP03 117 aa6.34□□□□□ -1.39
SH3D21-204ENST00000496636 LINC01620Q4KN68 170 aa6.34□□□□□ -1.39
SH3D21-204ENST00000496636 FAM231DQ6ZW35 169 aa6.34□□□□□ -1.39
SH3D21-204ENST00000496636 COX8CQ7Z4L0 72 aa6.34□□□□□ -1.39
SH3D21-204ENST00000496636 C15orf54Q8N8G6 183 aa6.34□□□□□ -1.39
SH3D21-204ENST00000496636 Q8N976 141 aa6.34□□□□□ -1.39
SH3D21-204ENST00000496636 OR4C5Q8NGB2 326 aa6.34□□□□□ -1.39
SH3D21-204ENST00000496636 RMI2Q96E14 147 aa6.34□□□□□ -1.39
SH3D21-204ENST00000496636 NDFIP1Q9BT67 221 aa6.34□□□□□ -1.39
SH3D21-204ENST00000496636 V9GYV3 84 aa6.34□□□□□ -1.39
SH3D21-204ENST00000496636 TRGV11A0A075B6L2 103 aa6.33□□□□□ -1.4
SH3D21-204ENST00000496636 LOC100131303A0A0U1RQF7 123 aa6.33□□□□□ -1.4
SH3D21-204ENST00000496636 COLCA2A8K830 154 aa6.33□□□□□ -1.4
SH3D21-204ENST00000496636 GATCO43716 136 aaKnown RBP6.33□□□□□ -1.4
SH3D21-204ENST00000496636 ZNF80P51504 273 aaPredicted RBP6.33□□□□□ -1.4
SH3D21-204ENST00000496636 SMUG1Q53HV7 270 aa6.33□□□□□ -1.4
SH3D21-204ENST00000496636 PRR9Q5T870 116 aa6.33□□□□□ -1.4
SH3D21-204ENST00000496636 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.33□□□□□ -1.4
SH3D21-204ENST00000496636 DAZAP1Q96EP5 407 aaKnown RBP6.33□□□□□ -1.4
SH3D21-204ENST00000496636 YPEL4Q96NS1 127 aa6.33□□□□□ -1.4
SH3D21-204ENST00000496636 IL36BQ9NZH7 164 aa6.33□□□□□ -1.4
SH3D21-204ENST00000496636 SH2D1AO60880 128 aa6.32□□□□□ -1.4
SH3D21-204ENST00000496636 GATA1P15976 413 aaPredicted RBP6.32□□□□□ -1.4
SH3D21-204ENST00000496636 HNRNPA3P51991 378 aaKnown RBP6.32□□□□□ -1.4
SH3D21-204ENST00000496636 ELOBQ15370 118 aa6.32□□□□□ -1.4
SH3D21-204ENST00000496636 RHOHQ15669 191 aa6.32□□□□□ -1.4
SH3D21-204ENST00000496636 Q6ZRU5 148 aa6.32□□□□□ -1.4
SH3D21-204ENST00000496636 IMMP2LQ96T52 175 aa6.32□□□□□ -1.4
SH3D21-204ENST00000496636 PRADC1Q9BSG0 188 aa6.32□□□□□ -1.4
SH3D21-204ENST00000496636 LENEPQ9Y5L5 61 aa6.32□□□□□ -1.4
SH3D21-204ENST00000496636 URGCP-MRPS24S4R325 110 aa6.32□□□□□ -1.4
SH3D21-204ENST00000496636 FABP5P3A8MUU1 101 aa6.31□□□□□ -1.4
SH3D21-204ENST00000496636 P01737 135 aa6.31□□□□□ -1.4
SH3D21-204ENST00000496636 S100PP25815 95 aa6.31□□□□□ -1.4
SH3D21-204ENST00000496636 ASIPP42127 132 aa6.31□□□□□ -1.4
SH3D21-204ENST00000496636 FAM162BQ5T6X4 162 aa6.31□□□□□ -1.4
SH3D21-204ENST00000496636 FAM159AQ6UWV7 190 aa6.31□□□□□ -1.4
SH3D21-204ENST00000496636 BAALCQ8WXS3 180 aa6.31□□□□□ -1.4
SH3D21-204ENST00000496636 GTSF1LQ9H1H1 148 aa6.31□□□□□ -1.4
SH3D21-204ENST00000496636 RPP21Q9H633 154 aaKnown RBP6.31□□□□□ -1.4
SH3D21-204ENST00000496636 TGIF2-C20orf24A0A0A6YYL0 155 aa6.3□□□□□ -1.4
SH3D21-204ENST00000496636 SMIM27A0A1W2PRY6 76 aa6.3□□□□□ -1.4
SH3D21-204ENST00000496636 M0R2P5 195 aa6.3□□□□□ -1.4
SH3D21-204ENST00000496636 CIDEAO60543 219 aa6.3□□□□□ -1.4
SH3D21-204ENST00000496636 CXCL1P09341 107 aa6.3□□□□□ -1.4
SH3D21-204ENST00000496636 C14orf177Q52M58 125 aa6.3□□□□□ -1.4
SH3D21-204ENST00000496636 MUC21Q5SSG8 566 aa6.3□□□□□ -1.4
SH3D21-204ENST00000496636 KCNIP4Q6PIL6 250 aa6.3□□□□□ -1.4
SH3D21-204ENST00000496636 Q6ZQT7 251 aa6.3□□□□□ -1.4
SH3D21-204ENST00000496636 OR2D3Q8NGH3 330 aa6.3□□□□□ -1.4
SH3D21-204ENST00000496636 TRBV6-4A0A1B0GX49 114 aa6.29□□□□□ -1.4
SH3D21-204ENST00000496636 A8MWL6 223 aa6.29□□□□□ -1.4
SH3D21-204ENST00000496636 GZMBP10144 247 aa6.29□□□□□ -1.4
SH3D21-204ENST00000496636 RPL19P84098 196 aaKnown RBP6.29□□□□□ -1.4
SH3D21-204ENST00000496636 CT83Q5H943 113 aa6.29□□□□□ -1.4
SH3D21-204ENST00000496636 Q6AWC8 147 aa6.29□□□□□ -1.4
SH3D21-204ENST00000496636 TSKUQ8WUA8 353 aa6.29□□□□□ -1.4
SH3D21-204ENST00000496636 C11orf21Q9P2W6 132 aa6.29□□□□□ -1.4
SH3D21-204ENST00000496636 TRBV24-1A0A075B6N3 115 aa6.28□□□□□ -1.4
SH3D21-204ENST00000496636 TMSB15BA0A087X1C1 80 aa6.28□□□□□ -1.4
SH3D21-204ENST00000496636 IGHV3-16A0A0C4DH30 117 aa6.28□□□□□ -1.4
SH3D21-204ENST00000496636 RAB5AP20339 215 aa6.28□□□□□ -1.4
SH3D21-204ENST00000496636 RPS20P60866 119 aaKnown RBP6.28□□□□□ -1.4
SH3D21-204ENST00000496636 SLC25A29Q8N8R3 303 aa6.28□□□□□ -1.4
SH3D21-204ENST00000496636 GTSF1Q8WW33 167 aa6.28□□□□□ -1.4
SH3D21-204ENST00000496636 IGKV2D-24A0A075B6R9 120 aa6.27□□□□□ -1.41
SH3D21-204ENST00000496636 TRAV9-1A0A075B6T8 112 aa6.27□□□□□ -1.41
SH3D21-204ENST00000496636 TRAV21A0A0B4J279 112 aa6.27□□□□□ -1.41
SH3D21-204ENST00000496636 IGKV3D-20A0A0C4DH25 116 aa6.27□□□□□ -1.41
SH3D21-204ENST00000496636 FOXA3P55318 350 aaPredicted RBP6.27□□□□□ -1.41
SH3D21-204ENST00000496636 LINC01559Q495D7 138 aa6.27□□□□□ -1.41
SH3D21-204ENST00000496636 DAZ4Q86SG3 579 aaKnown RBP6.27□□□□□ -1.41
SH3D21-204ENST00000496636 NUP35Q8NFH5 326 aa6.27□□□□□ -1.41
SH3D21-204ENST00000496636 BTF3L4Q96K17 158 aa6.27□□□□□ -1.41
SH3D21-204ENST00000496636 PGLYRP4Q96LB8 373 aa6.27□□□□□ -1.41
SH3D21-204ENST00000496636 GFRA4Q9GZZ7 299 aa6.27□□□□□ -1.41
SH3D21-204ENST00000496636 DAZ3Q9NR90 486 aaKnown RBP6.27□□□□□ -1.41
SH3D21-204ENST00000496636 NAT8BQ9UHF3 227 aa6.27□□□□□ -1.41
SH3D21-204ENST00000496636 XKRY2A2RUG3 117 aa6.26□□□□□ -1.41
SH3D21-204ENST00000496636 GRIFINA4D1Z8 144 aa6.26□□□□□ -1.41
SH3D21-204ENST00000496636 FAM231BA6NCW3 169 aa6.26□□□□□ -1.41
SH3D21-204ENST00000496636 HIGD1CA8MV81 97 aa6.26□□□□□ -1.41
SH3D21-204ENST00000496636 TYMSP04818 313 aa6.26□□□□□ -1.41
SH3D21-204ENST00000496636 Q8N3U1 123 aa6.26□□□□□ -1.41
SH3D21-204ENST00000496636 NAGKQ9UJ70 344 aa6.26□□□□□ -1.41
SH3D21-204ENST00000496636 RPS10P46783 165 aaKnown RBP6.25□□□□□ -1.41
SH3D21-204ENST00000496636 DPH3P1Q9H4G8 78 aa6.25□□□□□ -1.41
SH3D21-204ENST00000496636 GNRH2O43555 120 aa6.24□□□□□ -1.41
SH3D21-204ENST00000496636 IGLC6P0CF74 106 aa6.24□□□□□ -1.41
SH3D21-204ENST00000496636 MRPL54Q6P161 138 aaKnown RBP6.24□□□□□ -1.41
SH3D21-204ENST00000496636 LYZL1Q6UWQ5 148 aa6.24□□□□□ -1.41
SH3D21-204ENST00000496636 FER1L6-AS1Q8NA97 138 aa6.24□□□□□ -1.41
SH3D21-204ENST00000496636 KCNS1Q96KK3 526 aa6.24□□□□□ -1.41
SH3D21-204ENST00000496636 CHCHD7Q9BUK0 85 aa6.24□□□□□ -1.41
SH3D21-204ENST00000496636 TPPP3Q9BW30 176 aa6.24□□□□□ -1.41
SH3D21-204ENST00000496636 MUC21A0A0G2JKD1 596 aa6.23□□□□□ -1.41
SH3D21-204ENST00000496636 MUC21A0A140T8X8 626 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms