RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 FAM231CP0DMU5 169 aa15.15■□□□□ 0.02
C9orf3-222ENST00000496567 SRIP30626 198 aa15.15■□□□□ 0.02
C9orf3-222ENST00000496567 RPL36AP83881 106 aaKnown RBP15.15■□□□□ 0.02
C9orf3-222ENST00000496567 SH2D6Q7Z4S9 175 aa15.15■□□□□ 0.02
C9orf3-222ENST00000496567 RPL36ALQ969Q0 106 aaKnown RBP15.15■□□□□ 0.02
C9orf3-222ENST00000496567 TRAV26-2A0A0B4J265 109 aa15.14■□□□□ 0.01
C9orf3-222ENST00000496567 STARD9Q9P2P6 4700 aa15.14■□□□□ 0.01
C9orf3-222ENST00000496567 TRBV7-3A0A075B6L6 115 aa15.13■□□□□ 0.01
C9orf3-222ENST00000496567 GAGE12JA6NER3 117 aa15.13■□□□□ 0.01
C9orf3-222ENST00000496567 GAGE1Q13065 139 aa15.13■□□□□ 0.01
C9orf3-222ENST00000496567 GAGE4Q13068 117 aa15.13■□□□□ 0.01
C9orf3-222ENST00000496567 GAGE5Q13069 117 aa15.13■□□□□ 0.01
C9orf3-222ENST00000496567 MRPL51Q4U2R6 128 aaKnown RBP15.13■□□□□ 0.01
C9orf3-222ENST00000496567 GAGE13Q4V321 117 aa15.13■□□□□ 0.01
C9orf3-222ENST00000496567 TMEM136Q6ZRR5 245 aa15.13■□□□□ 0.01
C9orf3-222ENST00000496567 NEXN-AS1Q8NBZ9 246 aa15.13■□□□□ 0.01
C9orf3-222ENST00000496567 DNAJC30Q96LL9 226 aa15.13■□□□□ 0.01
C9orf3-222ENST00000496567 GNB1LQ9BYB4 327 aa15.13■□□□□ 0.01
C9orf3-222ENST00000496567 NIT2Q9NQR4 276 aa15.13■□□□□ 0.01
C9orf3-222ENST00000496567 Q9UF83 564 aa15.13■□□□□ 0.01
C9orf3-222ENST00000496567 NEGR1Q7Z3B1 354 aa15.12■□□□□ 0.01
C9orf3-222ENST00000496567 ZNRF2Q8NHG8 242 aa15.12■□□□□ 0.01
C9orf3-222ENST00000496567 TNFRSF18Q9Y5U5 241 aa15.12■□□□□ 0.01
C9orf3-222ENST00000496567 HLA-DQA1P01909 254 aa15.11■□□□□ 0.01
C9orf3-222ENST00000496567 PPP1R17O96001 155 aa15.11■□□□□ 0.01
C9orf3-222ENST00000496567 MT-ND6P03923 174 aa15.11■□□□□ 0.01
C9orf3-222ENST00000496567 TRGC2P03986 189 aa15.11■□□□□ 0.01
C9orf3-222ENST00000496567 PPBPP02775 128 aa15.1■□□□□ 0.01
C9orf3-222ENST00000496567 LINC00694P0DN24 101 aa15.1■□□□□ 0.01
C9orf3-222ENST00000496567 CKS2P33552 79 aa15.1■□□□□ 0.01
C9orf3-222ENST00000496567 TRAPPC1Q9Y5R8 145 aa15.1■□□□□ 0.01
C9orf3-222ENST00000496567 ATP6V0E2Q8NHE4 81 aa15.09■□□□□ 0.01
C9orf3-222ENST00000496567 UBE2D3P61077 147 aa15.08■□□□□ 0
C9orf3-222ENST00000496567 UBE2D2P62837 147 aa15.08■□□□□ 0
C9orf3-222ENST00000496567 FABP9Q0Z7S8 132 aa15.08■□□□□ 0
C9orf3-222ENST00000496567 OR10J3Q5JRS4 329 aa15.08■□□□□ 0
C9orf3-222ENST00000496567 RPL39LQ96EH5 51 aaKnown RBP15.08■□□□□ 0
C9orf3-222ENST00000496567 TMA7Q9Y2S6 64 aaKnown RBP15.08■□□□□ 0
C9orf3-222ENST00000496567 D6R8Y8 96 aa15.07■□□□□ 0
C9orf3-222ENST00000496567 SMKR1H3BMG3 65 aa15.07■□□□□ 0
C9orf3-222ENST00000496567 NCR2O95944 276 aa15.07■□□□□ 0
C9orf3-222ENST00000496567 APCSP02743 223 aa15.07■□□□□ 0
C9orf3-222ENST00000496567 ORMDL3Q8N138 153 aa15.07■□□□□ 0
C9orf3-222ENST00000496567 MRPL18Q9H0U6 180 aaKnown RBP15.07■□□□□ 0
C9orf3-222ENST00000496567 TENM2Q9NT68 2774 aa15.07■□□□□ 0
C9orf3-222ENST00000496567 PHOX2AO14813 284 aa15.07■□□□□ 0
C9orf3-222ENST00000496567 TRBV6-5A0A0K0K1A5 114 aa15.06■□□□□ 0
C9orf3-222ENST00000496567 C1orf196B1AJZ1 125 aa15.06■□□□□ 0
C9orf3-222ENST00000496567 GAS8-AS1O95177 125 aa15.06■□□□□ 0
C9orf3-222ENST00000496567 CCL18P55774 89 aa15.06■□□□□ 0
C9orf3-222ENST00000496567 DAZ4Q86SG3 579 aaKnown RBP15.06■□□□□ 0
C9orf3-222ENST00000496567 DAZ3Q9NR90 486 aaKnown RBP15.06■□□□□ 0
C9orf3-222ENST00000496567 GTSF1LQ9H1H1 148 aa15.05■□□□□ -0
C9orf3-222ENST00000496567 ST20Q9HBF5 79 aa15.05■□□□□ -0
C9orf3-222ENST00000496567 PLECQ15149 4684 aaKnown RBP15.05■□□□□ -0
C9orf3-222ENST00000496567 ESRGQ1W209 222 aa15.04■□□□□ -0
C9orf3-222ENST00000496567 LYPD5Q6UWN5 251 aa15.04■□□□□ -0
C9orf3-222ENST00000496567 NRACQ8N912 160 aa15.04■□□□□ -0
C9orf3-222ENST00000496567 TIRAPP58753 221 aa15.03■□□□□ -0
C9orf3-222ENST00000496567 PRELID3AQ96N28 172 aa15.03■□□□□ -0
C9orf3-222ENST00000496567 LAMTOR2Q9Y2Q5 125 aa15.03■□□□□ -0
C9orf3-222ENST00000496567 SDHAF1A6NFY7 115 aa15.02□□□□□ -0.01
C9orf3-222ENST00000496567 TNFRSF6BO95407 300 aa15.02□□□□□ -0.01
C9orf3-222ENST00000496567 KIAA1644Q3SXP7 199 aa15.02□□□□□ -0.01
C9orf3-222ENST00000496567 UBE2DNLQ8IWF7 75 aa15.02□□□□□ -0.01
C9orf3-222ENST00000496567 C20orf78Q9BR46 151 aa15.02□□□□□ -0.01
C9orf3-222ENST00000496567 RAB5BP61020 215 aa15.01□□□□□ -0.01
C9orf3-222ENST00000496567 SUMO2P61956 95 aaKnown RBP15.01□□□□□ -0.01
C9orf3-222ENST00000496567 TMEM97Q5BJF2 176 aa15.01□□□□□ -0.01
C9orf3-222ENST00000496567 IGHV3-38A0A0C4DH36 116 aa15□□□□□ -0.01
C9orf3-222ENST00000496567 LGALS9CQ6DKI2 356 aa15□□□□□ -0.01
C9orf3-222ENST00000496567 NPYP01303 97 aa14.99□□□□□ -0.01
C9orf3-222ENST00000496567 TMEM70Q9BUB7 260 aa14.99□□□□□ -0.01
C9orf3-222ENST00000496567 LINC00588Q9Y4M8 146 aa14.99□□□□□ -0.01
C9orf3-222ENST00000496567 POLR2KP53803 58 aaKnown RBP14.98□□□□□ -0.01
C9orf3-222ENST00000496567 MRPS16Q9Y3D3 137 aaKnown RBP14.98□□□□□ -0.01
C9orf3-222ENST00000496567 I3L3M4 83 aa14.98□□□□□ -0.01
C9orf3-222ENST00000496567 VCYO14598 125 aa14.98□□□□□ -0.01
C9orf3-222ENST00000496567 HIST1H2BKO60814 126 aa14.98□□□□□ -0.01
C9orf3-222ENST00000496567 HIST1H2BJP06899 126 aa14.98□□□□□ -0.01
C9orf3-222ENST00000496567 PMCHP20382 165 aa14.98□□□□□ -0.01
C9orf3-222ENST00000496567 HIST1H2BOP23527 126 aa14.98□□□□□ -0.01
C9orf3-222ENST00000496567 HIST1H2BBP33778 126 aa14.98□□□□□ -0.01
C9orf3-222ENST00000496567 HIST1H2BDP58876 126 aa14.98□□□□□ -0.01
C9orf3-222ENST00000496567 HIST1H2BCP62807 126 aa14.98□□□□□ -0.01
C9orf3-222ENST00000496567 HIST2H2BEQ16778 126 aa14.98□□□□□ -0.01
C9orf3-222ENST00000496567 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.98□□□□□ -0.01
C9orf3-222ENST00000496567 LELP1Q5T871 98 aa14.98□□□□□ -0.01
C9orf3-222ENST00000496567 HIST1H2BHQ93079 126 aa14.98□□□□□ -0.01
C9orf3-222ENST00000496567 HIST1H2BNQ99877 126 aa14.98□□□□□ -0.01
C9orf3-222ENST00000496567 HIST1H2BMQ99879 126 aa14.98□□□□□ -0.01
C9orf3-222ENST00000496567 TRBV27A0A0K0K1C4 114 aa14.97□□□□□ -0.01
C9orf3-222ENST00000496567 RPL32P62910 135 aaKnown RBP14.97□□□□□ -0.01
C9orf3-222ENST00000496567 COTL1Q14019 142 aa14.97□□□□□ -0.01
C9orf3-222ENST00000496567 MAP1LC3AQ9H492 121 aa14.96□□□□□ -0.01
C9orf3-222ENST00000496567 TRBV6-8A0A0A6YYG3 113 aa14.95□□□□□ -0.02
C9orf3-222ENST00000496567 TRAV8-6A0A0B4J262 113 aa14.95□□□□□ -0.02
C9orf3-222ENST00000496567 LINC00476Q8WZB0 136 aa14.95□□□□□ -0.02
C9orf3-222ENST00000496567 ALKBH7Q9BT30 221 aaPredicted RBP14.95□□□□□ -0.02
C9orf3-222ENST00000496567 UPK3BQ9BT76 320 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms