RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 NXPH4O95158 308 aa6.21□□□□□ -1.41
VPS13B-206ENST00000496144 FCER1GP30273 86 aa6.21□□□□□ -1.41
VPS13B-206ENST00000496144 ICOSQ9Y6W8 199 aa6.21□□□□□ -1.41
VPS13B-206ENST00000496144 TRGV1A0A0A0MS02 117 aa6.21□□□□□ -1.42
VPS13B-206ENST00000496144 SPANXN1Q5VSR9 72 aa6.21□□□□□ -1.42
VPS13B-206ENST00000496144 TRAV26-2A0A0B4J265 109 aa6.21□□□□□ -1.42
VPS13B-206ENST00000496144 GATA1P15976 413 aaPredicted RBP6.21□□□□□ -1.42
VPS13B-206ENST00000496144 TRPT1Q86TN4 253 aaKnown RBP6.21□□□□□ -1.42
VPS13B-206ENST00000496144 CSMD2Q7Z408 3487 aa6.21□□□□□ -1.42
VPS13B-206ENST00000496144 NBPF19A0A087WUL8 3843 aa6.21□□□□□ -1.42
VPS13B-206ENST00000496144 SPINK13Q1W4C9 94 aa6.2□□□□□ -1.42
VPS13B-206ENST00000496144 ODF3L2Q3SX64 289 aa6.2□□□□□ -1.42
VPS13B-206ENST00000496144 NSD1Q96L73 2696 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-206ENST00000496144 FBN2P35556 2912 aa6.2□□□□□ -1.42
VPS13B-206ENST00000496144 TCAPO15273 167 aa6.19□□□□□ -1.42
VPS13B-206ENST00000496144 RNASE3P12724 160 aaKnown RBP6.19□□□□□ -1.42
VPS13B-206ENST00000496144 BATFQ16520 125 aa6.19□□□□□ -1.42
VPS13B-206ENST00000496144 OTOGQ6ZRI0 2925 aa6.19□□□□□ -1.42
VPS13B-206ENST00000496144 PMCHL2Q9BQD1 86 aa6.19□□□□□ -1.42
VPS13B-206ENST00000496144 KIR3DS1Q14943 382 aa6.19□□□□□ -1.42
VPS13B-206ENST00000496144 DPH3P1Q9H4G8 78 aa6.19□□□□□ -1.42
VPS13B-206ENST00000496144 M0R2N4 97 aa6.19□□□□□ -1.42
VPS13B-206ENST00000496144 GNRH2O43555 120 aa6.19□□□□□ -1.42
VPS13B-206ENST00000496144 LAGE3Q14657 143 aa6.19□□□□□ -1.42
VPS13B-206ENST00000496144 COL5A1-AS1Q5SY13 56 aa6.19□□□□□ -1.42
VPS13B-206ENST00000496144 IFI27L1Q96BM0 104 aa6.19□□□□□ -1.42
VPS13B-206ENST00000496144 C7orf71A4D174 169 aa6.19□□□□□ -1.42
VPS13B-206ENST00000496144 LINC00476Q8WZB0 136 aa6.19□□□□□ -1.42
VPS13B-206ENST00000496144 M0R381 172 aa6.18□□□□□ -1.42
VPS13B-206ENST00000496144 COX8AP10176 69 aa6.18□□□□□ -1.42
VPS13B-206ENST00000496144 FAM222AQ5U5X8 452 aa6.18□□□□□ -1.42
VPS13B-206ENST00000496144 SLC25A34Q6PIV7 304 aa6.18□□□□□ -1.42
VPS13B-206ENST00000496144 TACC2O95359 2948 aa6.18□□□□□ -1.42
VPS13B-206ENST00000496144 A0A0J9YX75 114 aa6.18□□□□□ -1.42
VPS13B-206ENST00000496144 GAGE12BA1L429 117 aa6.18□□□□□ -1.42
VPS13B-206ENST00000496144 H3BMM0 161 aa6.18□□□□□ -1.42
VPS13B-206ENST00000496144 GAGE7O76087 117 aa6.18□□□□□ -1.42
VPS13B-206ENST00000496144 GAGE12FP0CL80 117 aa6.18□□□□□ -1.42
VPS13B-206ENST00000496144 GAGE12GP0CL81 117 aa6.18□□□□□ -1.42
VPS13B-206ENST00000496144 GAGE12IP0CL82 117 aa6.18□□□□□ -1.42
VPS13B-206ENST00000496144 RASL10AQ92737 203 aa6.18□□□□□ -1.42
VPS13B-206ENST00000496144 TP73-AS1Q9UF72 201 aa6.18□□□□□ -1.42
VPS13B-206ENST00000496144 PHLDA3Q9Y5J5 127 aa6.18□□□□□ -1.42
VPS13B-206ENST00000496144 PAX4O43316 350 aa6.18□□□□□ -1.42
VPS13B-206ENST00000496144 MRPL23Q16540 153 aaKnown RBP6.17□□□□□ -1.42
VPS13B-206ENST00000496144 OR4C5Q8NGB2 326 aa6.17□□□□□ -1.42
VPS13B-206ENST00000496144 STPG4Q8N801 248 aa6.17□□□□□ -1.42
VPS13B-206ENST00000496144 C20orf78Q9BR46 151 aa6.17□□□□□ -1.42
VPS13B-206ENST00000496144 NOP10Q9NPE3 64 aaKnown RBP6.17□□□□□ -1.42
VPS13B-206ENST00000496144 TRAV12-3A0A0B4J271 114 aa6.17□□□□□ -1.42
VPS13B-206ENST00000496144 FGF6P10767 208 aa6.17□□□□□ -1.42
VPS13B-206ENST00000496144 HINT1P49773 126 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-206ENST00000496144 GAGE1Q13065 139 aa6.16□□□□□ -1.42
VPS13B-206ENST00000496144 C9orf85Q96MD7 179 aa6.16□□□□□ -1.42
VPS13B-206ENST00000496144 SPXQ9BT56 116 aa6.16□□□□□ -1.42
VPS13B-206ENST00000496144 TM2D2Q9BX73 214 aa6.16□□□□□ -1.42
VPS13B-206ENST00000496144 ANK3Q12955 4377 aaKnown RBP6.16□□□□□ -1.42
VPS13B-206ENST00000496144 TMEM263Q8WUH6 116 aaKnown RBP6.16□□□□□ -1.42
VPS13B-206ENST00000496144 AP1S3Q96PC3 154 aa6.16□□□□□ -1.42
VPS13B-206ENST00000496144 ZNF469Q96JG9 3925 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-206ENST00000496144 IGHV3-16A0A0C4DH30 117 aa6.16□□□□□ -1.42
VPS13B-206ENST00000496144 K7EMI3 77 aa6.16□□□□□ -1.42
VPS13B-206ENST00000496144 TOMM6Q96B49 74 aa6.16□□□□□ -1.42
VPS13B-206ENST00000496144 PRSS29PA6NIE9 313 aa6.16□□□□□ -1.42
VPS13B-206ENST00000496144 ODF1Q14990 250 aa6.16□□□□□ -1.42
VPS13B-206ENST00000496144 C10orf126Q8N4M7 172 aa6.16□□□□□ -1.42
VPS13B-206ENST00000496144 SMIM2Q9BVW6 85 aa6.16□□□□□ -1.42
VPS13B-206ENST00000496144 EDA2RQ9HAV5 297 aa6.16□□□□□ -1.42
VPS13B-206ENST00000496144 KIF25-AS1Q9Y6Z4 181 aa6.16□□□□□ -1.42
VPS13B-206ENST00000496144 ATP5LO75964 103 aa6.15□□□□□ -1.42
VPS13B-206ENST00000496144 MGPP08493 103 aa6.15□□□□□ -1.42
VPS13B-206ENST00000496144 C2orf91Q6ZV80 131 aa6.15□□□□□ -1.42
VPS13B-206ENST00000496144 C14orf178Q8N769 122 aaPredicted RBP6.15□□□□□ -1.42
VPS13B-206ENST00000496144 DKK2Q9UBU2 259 aa6.15□□□□□ -1.42
VPS13B-206ENST00000496144 CELSR2Q9HCU4 2923 aa6.15□□□□□ -1.42
VPS13B-206ENST00000496144 DPH3Q96FX2 82 aa6.15□□□□□ -1.42
VPS13B-206ENST00000496144 AZU1P20160 251 aa6.15□□□□□ -1.43
VPS13B-206ENST00000496144 RPL39LQ96EH5 51 aaKnown RBP6.15□□□□□ -1.43
VPS13B-206ENST00000496144 C18orf15Q96N68 181 aa6.15□□□□□ -1.43
VPS13B-206ENST00000496144 CRPP02741 224 aa6.15□□□□□ -1.43
VPS13B-206ENST00000496144 LINC00315P59091 139 aa6.15□□□□□ -1.43
VPS13B-206ENST00000496144 ZNF25P17030 456 aaPredicted RBP6.14□□□□□ -1.43
VPS13B-206ENST00000496144 ANKRD39Q53RE8 183 aa6.14□□□□□ -1.43
VPS13B-206ENST00000496144 IGKCP01834 107 aa6.14□□□□□ -1.43
VPS13B-206ENST00000496144 G0S2P27469 103 aa6.14□□□□□ -1.43
VPS13B-206ENST00000496144 SMAGPQ0VAQ4 97 aa6.14□□□□□ -1.43
VPS13B-206ENST00000496144 BVES-AS1Q5T3Y7 98 aa6.14□□□□□ -1.43
VPS13B-206ENST00000496144 DLEU1O43261 78 aa6.14□□□□□ -1.43
VPS13B-206ENST00000496144 RPL32P62910 135 aaKnown RBP6.14□□□□□ -1.43
VPS13B-206ENST00000496144 ZNF124Q15973 351 aa6.14□□□□□ -1.43
VPS13B-206ENST00000496144 ORMDL2Q53FV1 153 aa6.14□□□□□ -1.43
VPS13B-206ENST00000496144 Q6ZTC4 211 aa6.14□□□□□ -1.43
VPS13B-206ENST00000496144 PPP1R17O96001 155 aa6.14□□□□□ -1.43
VPS13B-206ENST00000496144 SUMO2P61956 95 aaKnown RBP6.14□□□□□ -1.43
VPS13B-206ENST00000496144 A0A0J9YY99 117 aa6.14□□□□□ -1.43
VPS13B-206ENST00000496144 A8MTW9 85 aa6.14□□□□□ -1.43
VPS13B-206ENST00000496144 SIVA1O15304 175 aa6.14□□□□□ -1.43
VPS13B-206ENST00000496144 CIDEAO60543 219 aa6.14□□□□□ -1.43
VPS13B-206ENST00000496144 AMTNQ6UX39 209 aa6.14□□□□□ -1.43
VPS13B-206ENST00000496144 WNK1Q9H4A3 2382 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms