RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 KLHL30-AS1Q8NEE0 82 aa8.25□□□□□ -1.09
CHMP3-209ENST00000494623 PRRC2AP48634 2157 aaKnown RBP8.25□□□□□ -1.09
CHMP3-209ENST00000494623 TAL2Q16559 108 aa8.25□□□□□ -1.09
CHMP3-209ENST00000494623 TRPT1Q86TN4 253 aaKnown RBP8.25□□□□□ -1.09
CHMP3-209ENST00000494623 Q8N2B8 174 aa8.25□□□□□ -1.09
CHMP3-209ENST00000494623 DLX4Q92988 240 aaPredicted RBP8.25□□□□□ -1.09
CHMP3-209ENST00000494623 TMEM141Q96I45 108 aa8.25□□□□□ -1.09
CHMP3-209ENST00000494623 IGLV4-69A0A075B6H9 119 aa8.24□□□□□ -1.09
CHMP3-209ENST00000494623 ZNF815PA8K554 130 aa8.24□□□□□ -1.09
CHMP3-209ENST00000494623 H3BMM0 161 aa8.24□□□□□ -1.09
CHMP3-209ENST00000494623 PHLDA1Q8WV24 401 aaPredicted RBP8.24□□□□□ -1.09
CHMP3-209ENST00000494623 OPRPNQ99935 248 aaPredicted RBP8.24□□□□□ -1.09
CHMP3-209ENST00000494623 PEMTQ9UBM1 199 aa8.24□□□□□ -1.09
CHMP3-209ENST00000494623 ZNF469Q96JG9 3925 aaPredicted RBP8.24□□□□□ -1.09
CHMP3-209ENST00000494623 EPG5Q9HCE0 2579 aa8.24□□□□□ -1.09
CHMP3-209ENST00000494623 RIPPLY3P57055 190 aa8.24□□□□□ -1.09
CHMP3-209ENST00000494623 C12orf74Q32Q52 190 aa8.24□□□□□ -1.09
CHMP3-209ENST00000494623 RBMY1BA6NDE4 496 aaKnown RBP8.23□□□□□ -1.09
CHMP3-209ENST00000494623 RBMY1EA6NEQ0 496 aaKnown RBP8.23□□□□□ -1.09
CHMP3-209ENST00000494623 LINC01549A6NIU2 74 aa8.23□□□□□ -1.09
CHMP3-209ENST00000494623 RBMY1DP0C7P1 496 aaKnown RBP8.23□□□□□ -1.09
CHMP3-209ENST00000494623 PROK1P58294 105 aa8.23□□□□□ -1.09
CHMP3-209ENST00000494623 SCGB1D4Q6XE38 83 aa8.23□□□□□ -1.09
CHMP3-209ENST00000494623 DYNLRB2Q8TF09 96 aa8.23□□□□□ -1.09
CHMP3-209ENST00000494623 TIMM17AQ99595 171 aa8.23□□□□□ -1.09
CHMP3-209ENST00000494623 TRBV7-3A0A075B6L6 115 aa8.23□□□□□ -1.09
CHMP3-209ENST00000494623 TMEM170BQ5T4T1 132 aa8.23□□□□□ -1.09
CHMP3-209ENST00000494623 KRTAP1-3Q8IUG1 177 aa8.23□□□□□ -1.09
CHMP3-209ENST00000494623 C11orf44Q8N8P7 122 aa8.23□□□□□ -1.09
CHMP3-209ENST00000494623 C4orf3Q8WVX3 66 aa8.23□□□□□ -1.09
CHMP3-209ENST00000494623 PLEKHB2Q96CS7 222 aa8.23□□□□□ -1.09
CHMP3-209ENST00000494623 APCP25054 2843 aa8.23□□□□□ -1.09
CHMP3-209ENST00000494623 P0DMU3 169 aa8.23□□□□□ -1.09
CHMP3-209ENST00000494623 FAM231AP0DMU4 169 aa8.23□□□□□ -1.09
CHMP3-209ENST00000494623 FAM231CP0DMU5 169 aa8.23□□□□□ -1.09
CHMP3-209ENST00000494623 SONP18583 2426 aaKnown RBP8.22□□□□□ -1.09
CHMP3-209ENST00000494623 IGLL5B9A064 214 aa8.22□□□□□ -1.09
CHMP3-209ENST00000494623 I3L3M4 83 aa8.22□□□□□ -1.09
CHMP3-209ENST00000494623 PAPPA-AS1Q5QFB9 102 aa8.22□□□□□ -1.09
CHMP3-209ENST00000494623 ZNRF2Q8NHG8 242 aa8.22□□□□□ -1.09
CHMP3-209ENST00000494623 HERVK_113P61574 105 aa8.22□□□□□ -1.09
CHMP3-209ENST00000494623 WFDC11Q8NEX6 87 aa8.22□□□□□ -1.09
CHMP3-209ENST00000494623 SRSF9Q13242 221 aaKnown RBP eCLIP8.21□□□□□ -1.09
CHMP3-209ENST00000494623 HIST2H2BCQ6DN03 193 aa8.21□□□□□ -1.09
CHMP3-209ENST00000494623 OR5A1Q8NGJ0 315 aa8.21□□□□□ -1.09
CHMP3-209ENST00000494623 MAP6D1Q9H9H5 199 aa8.21□□□□□ -1.09
CHMP3-209ENST00000494623 NBPF19A0A087WUL8 3843 aa8.21□□□□□ -1.1
CHMP3-209ENST00000494623 A0A1W2PRX2 142 aa8.21□□□□□ -1.1
CHMP3-209ENST00000494623 SAP30O75446 220 aa8.21□□□□□ -1.1
CHMP3-209ENST00000494623 RHOHQ15669 191 aa8.21□□□□□ -1.1
CHMP3-209ENST00000494623 DEFB114Q30KQ6 69 aa8.21□□□□□ -1.1
CHMP3-209ENST00000494623 NSUN5P1Q3KNT7 163 aa8.21□□□□□ -1.1
CHMP3-209ENST00000494623 Q6ZSV7 163 aa8.21□□□□□ -1.1
CHMP3-209ENST00000494623 LINC01587Q99440 93 aa8.21□□□□□ -1.1
CHMP3-209ENST00000494623 C20orf203Q8NBC4 194 aa8.2□□□□□ -1.1
CHMP3-209ENST00000494623 ZNF479Q96JC4 524 aa8.2□□□□□ -1.1
CHMP3-209ENST00000494623 Q9UF83 564 aa8.19□□□□□ -1.1
CHMP3-209ENST00000494623 TRAV2A0A0B4J234 112 aa8.19□□□□□ -1.1
CHMP3-209ENST00000494623 K7ERU9 68 aa8.19□□□□□ -1.1
CHMP3-209ENST00000494623 M0R2P5 195 aa8.19□□□□□ -1.1
CHMP3-209ENST00000494623 TNFRSF18Q9Y5U5 241 aa8.19□□□□□ -1.1
CHMP3-209ENST00000494623 ITPR3Q14573 2671 aa8.19□□□□□ -1.1
CHMP3-209ENST00000494623 CHD6Q8TD26 2715 aa8.19□□□□□ -1.1
CHMP3-209ENST00000494623 A8MTW9 85 aa8.18□□□□□ -1.1
CHMP3-209ENST00000494623 TSPEAR-AS2P59090 65 aa8.18□□□□□ -1.1
CHMP3-209ENST00000494623 Q6ZSN1 163 aa8.18□□□□□ -1.1
CHMP3-209ENST00000494623 RAX2Q96IS3 184 aa8.18□□□□□ -1.1
CHMP3-209ENST00000494623 VCX2Q9H322 139 aa8.18□□□□□ -1.1
CHMP3-209ENST00000494623 CCDC168Q8NDH2 2452 aa8.18□□□□□ -1.1
CHMP3-209ENST00000494623 DNAJC9-AS1A6NH13 148 aa8.18□□□□□ -1.1
CHMP3-209ENST00000494623 ZNF415Q09FC8 603 aa8.18□□□□□ -1.1
CHMP3-209ENST00000494623 SPAG8Q99932 426 aaPredicted RBP8.18□□□□□ -1.1
CHMP3-209ENST00000494623 NF1P21359 2839 aa8.17□□□□□ -1.1
CHMP3-209ENST00000494623 IGHV3-64A0A075B6Q5 118 aa8.17□□□□□ -1.1
CHMP3-209ENST00000494623 A0A0J9YY99 117 aa8.17□□□□□ -1.1
CHMP3-209ENST00000494623 A8MWV9 139 aa8.17□□□□□ -1.1
CHMP3-209ENST00000494623 CD28P10747 220 aa8.17□□□□□ -1.1
CHMP3-209ENST00000494623 RRN3P1Q2M238 152 aa8.17□□□□□ -1.1
CHMP3-209ENST00000494623 MRPL16Q9NX20 251 aaKnown RBP8.17□□□□□ -1.1
CHMP3-209ENST00000494623 XCL2Q9UBD3 114 aa8.17□□□□□ -1.1
CHMP3-209ENST00000494623 WNK1Q9H4A3 2382 aa8.17□□□□□ -1.1
CHMP3-209ENST00000494623 AKAP9Q99996 3911 aa8.17□□□□□ -1.1
CHMP3-209ENST00000494623 IGLV4-3A0A075B6K6 122 aa8.16□□□□□ -1.1
CHMP3-209ENST00000494623 A0A0J9YXV3 536 aa8.16□□□□□ -1.1
CHMP3-209ENST00000494623 CEMP1Q6PRD7 247 aaPredicted RBP8.16□□□□□ -1.1
CHMP3-209ENST00000494623 TMEM86BQ8N661 226 aa8.16□□□□□ -1.1
CHMP3-209ENST00000494623 IGHV3OR16-12A0A075B7B8 117 aa8.16□□□□□ -1.1
CHMP3-209ENST00000494623 A0A1B0GWB2 263 aa8.16□□□□□ -1.1
CHMP3-209ENST00000494623 J3QQQ9 107 aa8.16□□□□□ -1.1
CHMP3-209ENST00000494623 LGALS3P17931 250 aaKnown RBP8.16□□□□□ -1.1
CHMP3-209ENST00000494623 CFAP126Q5VTH2 177 aa8.16□□□□□ -1.1
CHMP3-209ENST00000494623 NFE4Q86UQ8 179 aa8.16□□□□□ -1.1
CHMP3-209ENST00000494623 ESM1Q9NQ30 184 aa8.16□□□□□ -1.1
CHMP3-209ENST00000494623 H3BMG7 143 aa8.16□□□□□ -1.1
CHMP3-209ENST00000494623 INSP01308 110 aa8.16□□□□□ -1.1
CHMP3-209ENST00000494623 APOMO95445 188 aa8.15□□□□□ -1.1
CHMP3-209ENST00000494623 RPL24P83731 157 aaKnown RBP8.15□□□□□ -1.1
CHMP3-209ENST00000494623 RNASE13Q5GAN3 156 aaKnown RBP8.15□□□□□ -1.1
CHMP3-209ENST00000494623 PGPEP1Q9NXJ5 209 aa8.15□□□□□ -1.1
CHMP3-209ENST00000494623 CUBNO60494 3623 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms