RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 ANGP03950 147 aaKnown RBP8.19□□□□□ -1.1
SKA1-205ENST00000494518 RPL37AP61513 92 aaKnown RBP8.19□□□□□ -1.1
SKA1-205ENST00000494518 Q0VG73 95 aa8.19□□□□□ -1.1
SKA1-205ENST00000494518 COX8CQ7Z4L0 72 aa8.19□□□□□ -1.1
SKA1-205ENST00000494518 NEXN-AS1Q8NBZ9 246 aa8.19□□□□□ -1.1
SKA1-205ENST00000494518 OR10AG1Q8NH19 301 aa8.19□□□□□ -1.1
SKA1-205ENST00000494518 CHCHD5Q9BSY4 110 aa8.19□□□□□ -1.1
SKA1-205ENST00000494518 NKX6-2Q9C056 277 aaPredicted RBP8.19□□□□□ -1.1
SKA1-205ENST00000494518 LTAP01374 205 aa8.18□□□□□ -1.1
SKA1-205ENST00000494518 FHITP49789 147 aa8.18□□□□□ -1.1
SKA1-205ENST00000494518 HNRNPA3P51991 378 aaKnown RBP8.18□□□□□ -1.1
SKA1-205ENST00000494518 C14orf177Q52M58 125 aa8.18□□□□□ -1.1
SKA1-205ENST00000494518 SERTAD4-AS1Q5TG53 156 aa8.18□□□□□ -1.1
SKA1-205ENST00000494518 STOML3Q8TAV4 291 aa8.18□□□□□ -1.1
SKA1-205ENST00000494518 KRTAP4-8A0A0G2JLE6 195 aa8.17□□□□□ -1.1
SKA1-205ENST00000494518 OXTP01178 125 aa8.17□□□□□ -1.1
SKA1-205ENST00000494518 PRSS1P07477 247 aa8.17□□□□□ -1.1
SKA1-205ENST00000494518 RAB4BP61018 213 aa8.17□□□□□ -1.1
SKA1-205ENST00000494518 GAGE6Q13070 117 aa8.17□□□□□ -1.1
SKA1-205ENST00000494518 OR10G8Q8NGN5 311 aa8.17□□□□□ -1.1
SKA1-205ENST00000494518 TRBV6-1A0A0K0K1D8 114 aa8.16□□□□□ -1.1
SKA1-205ENST00000494518 F5H697 171 aa8.16□□□□□ -1.1
SKA1-205ENST00000494518 ARPC5O15511 151 aa8.16□□□□□ -1.1
SKA1-205ENST00000494518 PAGE4O60829 102 aa8.16□□□□□ -1.1
SKA1-205ENST00000494518 PRR27Q6MZM9 219 aa8.16□□□□□ -1.1
SKA1-205ENST00000494518 CYTL1Q9NRR1 136 aa8.16□□□□□ -1.1
SKA1-205ENST00000494518 PLA2G2DQ9UNK4 145 aa8.16□□□□□ -1.1
SKA1-205ENST00000494518 G3V3Q6 166 aa8.15□□□□□ -1.1
SKA1-205ENST00000494518 PANO1I0J062 215 aa8.15□□□□□ -1.1
SKA1-205ENST00000494518 NTM-AS1Q6ZSK4 140 aa8.15□□□□□ -1.1
SKA1-205ENST00000494518 DAZAP1Q96EP5 407 aaKnown RBP8.15□□□□□ -1.1
SKA1-205ENST00000494518 ZNF471Q9BX82 626 aaPredicted RBP8.15□□□□□ -1.1
SKA1-205ENST00000494518 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.15□□□□□ -1.1
SKA1-205ENST00000494518 SMLR1H3BR10 107 aa8.14□□□□□ -1.11
SKA1-205ENST00000494518 RBX1P62877 108 aa8.14□□□□□ -1.11
SKA1-205ENST00000494518 SPANXN1Q5VSR9 72 aa8.14□□□□□ -1.11
SKA1-205ENST00000494518 LINC00269Q8N2A0 174 aa8.14□□□□□ -1.11
SKA1-205ENST00000494518 IGLV10-54A0A075B6I4 117 aa8.13□□□□□ -1.11
SKA1-205ENST00000494518 MIAQ16674 131 aa8.13□□□□□ -1.11
SKA1-205ENST00000494518 BAGE2Q86Y30 109 aa8.13□□□□□ -1.11
SKA1-205ENST00000494518 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.13□□□□□ -1.11
SKA1-205ENST00000494518 FAM213BQ8TBF2 198 aa8.13□□□□□ -1.11
SKA1-205ENST00000494518 DERL1Q9BUN8 251 aa8.13□□□□□ -1.11
SKA1-205ENST00000494518 SNAI2O43623 268 aa8.12□□□□□ -1.11
SKA1-205ENST00000494518 MGPP08493 103 aa8.12□□□□□ -1.11
SKA1-205ENST00000494518 KRTAP26-1Q6PEX3 210 aa8.12□□□□□ -1.11
SKA1-205ENST00000494518 C9orf163Q8N9P6 203 aa8.12□□□□□ -1.11
SKA1-205ENST00000494518 SFT2D1Q8WV19 159 aa8.12□□□□□ -1.11
SKA1-205ENST00000494518 TCEAL7Q9BRU2 100 aa8.12□□□□□ -1.11
SKA1-205ENST00000494518 TRBV25-1A0A075B6N4 114 aa8.11□□□□□ -1.11
SKA1-205ENST00000494518 PFDN1O60925 122 aa8.11□□□□□ -1.11
SKA1-205ENST00000494518 SMIM17P0DL12 118 aa8.11□□□□□ -1.11
SKA1-205ENST00000494518 GZMBP10144 247 aa8.11□□□□□ -1.11
SKA1-205ENST00000494518 MLST8Q9BVC4 326 aa8.11□□□□□ -1.11
SKA1-205ENST00000494518 TPPP3Q9BW30 176 aa8.11□□□□□ -1.11
SKA1-205ENST00000494518 CXCL1P09341 107 aa8.1□□□□□ -1.11
SKA1-205ENST00000494518 RAB5CP51148 216 aa8.1□□□□□ -1.11
SKA1-205ENST00000494518 PKIAP61925 76 aa8.1□□□□□ -1.11
SKA1-205ENST00000494518 DGAT2L7PQ6IED9 249 aa8.1□□□□□ -1.11
SKA1-205ENST00000494518 AP1S3Q96PC3 154 aa8.1□□□□□ -1.11
SKA1-205ENST00000494518 PRR34Q9NV39 138 aa8.1□□□□□ -1.11
SKA1-205ENST00000494518 VAX2Q9UIW0 290 aa8.1□□□□□ -1.11
SKA1-205ENST00000494518 KIF25-AS1Q9Y6Z4 181 aa8.1□□□□□ -1.11
SKA1-205ENST00000494518 TNXBP22105 4242 aa8.09□□□□□ -1.11
SKA1-205ENST00000494518 TMEM238LA0A1B0GVL6 79 aa8.09□□□□□ -1.11
SKA1-205ENST00000494518 hDV102S1A0JD36 115 aa8.09□□□□□ -1.11
SKA1-205ENST00000494518 S100A9P06702 114 aaKnown RBP8.09□□□□□ -1.11
SKA1-205ENST00000494518 OR5AL1P0C617 328 aa8.09□□□□□ -1.11
SKA1-205ENST00000494518 REG3AQ06141 175 aa8.09□□□□□ -1.11
SKA1-205ENST00000494518 TMEM97Q5BJF2 176 aa8.09□□□□□ -1.11
SKA1-205ENST00000494518 KRTAP19-1Q8IUB9 90 aa8.09□□□□□ -1.11
SKA1-205ENST00000494518 IGHV1-24A0A0C4DH33 117 aa8.08□□□□□ -1.12
SKA1-205ENST00000494518 CHTF8P0CG12 524 aa8.08□□□□□ -1.12
SKA1-205ENST00000494518 RPL35P42766 123 aaKnown RBP8.08□□□□□ -1.12
SKA1-205ENST00000494518 NKX2-5P52952 324 aaPredicted RBP8.08□□□□□ -1.12
SKA1-205ENST00000494518 SUMO4Q6EEV6 95 aa8.08□□□□□ -1.12
SKA1-205ENST00000494518 SDIM1Q6ZPB5 146 aa8.08□□□□□ -1.12
SKA1-205ENST00000494518 KCNRGQ8N5I3 272 aa8.08□□□□□ -1.12
SKA1-205ENST00000494518 C20orf203Q8NBC4 194 aa8.08□□□□□ -1.12
SKA1-205ENST00000494518 MBD3L1Q8WWY6 194 aa8.08□□□□□ -1.12
SKA1-205ENST00000494518 GFRA4Q9GZZ7 299 aa8.08□□□□□ -1.12
SKA1-205ENST00000494518 IGLV4-60A0A075B6I1 120 aa8.07□□□□□ -1.12
SKA1-205ENST00000494518 IQCJQ1A5X6 159 aa8.07□□□□□ -1.12
SKA1-205ENST00000494518 TMUB2Q71RG4 321 aa8.07□□□□□ -1.12
SKA1-205ENST00000494518 M0QY20 66 aa8.06□□□□□ -1.12
SKA1-205ENST00000494518 SLPIP03973 132 aa8.06□□□□□ -1.12
SKA1-205ENST00000494518 MT1HL1P0DM35 61 aa8.06□□□□□ -1.12
SKA1-205ENST00000494518 DPH3Q96FX2 82 aa8.06□□□□□ -1.12
SKA1-205ENST00000494518 CENPWQ5EE01 88 aa8.05□□□□□ -1.12
SKA1-205ENST00000494518 FER1L6-AS1Q8NA97 138 aa8.05□□□□□ -1.12
SKA1-205ENST00000494518 CLRN3Q8NCR9 226 aa8.05□□□□□ -1.12
SKA1-205ENST00000494518 OR2D3Q8NGH3 330 aa8.05□□□□□ -1.12
SKA1-205ENST00000494518 TMEM243Q9BU79 118 aa8.05□□□□□ -1.12
SKA1-205ENST00000494518 BATF3Q9NR55 127 aa8.05□□□□□ -1.12
SKA1-205ENST00000494518 LRP2P98164 4655 aa8.05□□□□□ -1.12
SKA1-205ENST00000494518 IGHV3-64A0A075B6Q5 118 aa8.04□□□□□ -1.12
SKA1-205ENST00000494518 IGKV3OR2-268A0A0C4DH90 116 aa8.04□□□□□ -1.12
SKA1-205ENST00000494518 A0A0D9SG52 128 aa8.04□□□□□ -1.12
SKA1-205ENST00000494518 UMAD1C9J7I0 102 aa8.04□□□□□ -1.12
SKA1-205ENST00000494518 IGLC6P0CF74 106 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms