RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 LINC01545Q5VT33 79 aa4.43□□□□□ -1.7
CPSF7-213ENST00000494016 TEX29Q8N6K0 151 aa4.43□□□□□ -1.7
CPSF7-213ENST00000494016 POM121L12Q8N7R1 296 aa4.43□□□□□ -1.7
CPSF7-213ENST00000494016 Q8N8P6 123 aa4.43□□□□□ -1.7
CPSF7-213ENST00000494016 OR11H1Q8NG94 326 aa4.43□□□□□ -1.7
CPSF7-213ENST00000494016 OR1N2Q8NGR9 330 aa4.43□□□□□ -1.7
CPSF7-213ENST00000494016 OR2K2Q8NGT1 345 aa4.43□□□□□ -1.7
CPSF7-213ENST00000494016 ODF3Q96PU9 254 aa4.43□□□□□ -1.7
CPSF7-213ENST00000494016 MAP1LC3CQ9BXW4 147 aa4.43□□□□□ -1.7
CPSF7-213ENST00000494016 LAMTOR2Q9Y2Q5 125 aa4.43□□□□□ -1.7
CPSF7-213ENST00000494016 KIF25-AS1Q9Y6Z4 181 aa4.43□□□□□ -1.7
CPSF7-213ENST00000494016 MEGF8Q7Z7M0 2845 aa4.43□□□□□ -1.7
CPSF7-213ENST00000494016 MUC4Q99102 2169 aa4.43□□□□□ -1.7
CPSF7-213ENST00000494016 TRAV12-3A0A0B4J271 114 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 hDV102S1A0JD36 115 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 C20orf202A1L168 122 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 C7orf71A4D174 169 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 OR4C46A6NHA9 309 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 M0R143 59 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 SIVA1O15304 175 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 NXPH4O95158 308 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 FCER1GP30273 86 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 LEPP41159 167 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 ASIPP42127 132 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 LINC00315P59091 139 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 SPANXN1Q5VSR9 72 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 AMTNQ6UX39 209 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 SMIM15Q7Z3B0 74 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 C4orf3Q8WVX3 66 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 DLX4Q92988 240 aaPredicted RBP4.42□□□□□ -1.7
CPSF7-213ENST00000494016 DUX3Q96PT4 197 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 MAP1LC3AQ9H492 121 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 Q9H8V8 135 aa4.42□□□□□ -1.7
CPSF7-213ENST00000494016 TIMM8BQ9Y5J9 83 aaPredicted RBP4.42□□□□□ -1.7
CPSF7-213ENST00000494016 TRAV2A0A0B4J234 112 aa4.41□□□□□ -1.7
CPSF7-213ENST00000494016 TRAV26-2A0A0B4J265 109 aa4.41□□□□□ -1.7
CPSF7-213ENST00000494016 A0A1B0GV90 55 aa4.41□□□□□ -1.7
CPSF7-213ENST00000494016 KNCNA6PVL3 124 aa4.41□□□□□ -1.7
CPSF7-213ENST00000494016 A8MTW9 85 aa4.41□□□□□ -1.7
CPSF7-213ENST00000494016 DUSP14O95147 198 aaKnown RBP4.41□□□□□ -1.7
CPSF7-213ENST00000494016 IGKV3-20P01619 116 aa4.41□□□□□ -1.7
CPSF7-213ENST00000494016 HBDP02042 147 aa4.41□□□□□ -1.7
CPSF7-213ENST00000494016 SNRPD3P62318 126 aaKnown RBP4.41□□□□□ -1.7
CPSF7-213ENST00000494016 DEFB114Q30KQ6 69 aa4.41□□□□□ -1.7
CPSF7-213ENST00000494016 MRPL52Q86TS9 123 aaKnown RBP4.41□□□□□ -1.7
CPSF7-213ENST00000494016 C14orf178Q8N769 122 aaPredicted RBP4.41□□□□□ -1.7
CPSF7-213ENST00000494016 RASL10AQ92737 203 aa4.41□□□□□ -1.7
CPSF7-213ENST00000494016 MRAP2Q96G30 205 aa4.41□□□□□ -1.7
CPSF7-213ENST00000494016 PMCHL2Q9BQD1 86 aa4.41□□□□□ -1.7
CPSF7-213ENST00000494016 C16orf95Q9H693 158 aa4.41□□□□□ -1.7
CPSF7-213ENST00000494016 NXT2Q9NPJ8 142 aaKnown RBP4.41□□□□□ -1.7
CPSF7-213ENST00000494016 MDFICQ9P1T7 246 aa4.41□□□□□ -1.7
CPSF7-213ENST00000494016 UQCR10Q9UDW1 63 aa4.41□□□□□ -1.7
CPSF7-213ENST00000494016 AGRNO00468 2067 aa4.41□□□□□ -1.7
CPSF7-213ENST00000494016 PKD1L1Q8TDX9 2849 aa4.4□□□□□ -1.7
CPSF7-213ENST00000494016 TGP01266 2768 aa4.4□□□□□ -1.7
CPSF7-213ENST00000494016 TRAV12-2A0A075B6T6 113 aa4.4□□□□□ -1.71
CPSF7-213ENST00000494016 IGHV3-16A0A0C4DH30 117 aa4.4□□□□□ -1.71
CPSF7-213ENST00000494016 RBMY1BA6NDE4 496 aaKnown RBP4.4□□□□□ -1.71
CPSF7-213ENST00000494016 RBMY1EA6NEQ0 496 aaKnown RBP4.4□□□□□ -1.71
CPSF7-213ENST00000494016 M0R381 172 aa4.4□□□□□ -1.71
CPSF7-213ENST00000494016 RBMY1DP0C7P1 496 aaKnown RBP4.4□□□□□ -1.71
CPSF7-213ENST00000494016 CD28P10747 220 aa4.4□□□□□ -1.71
CPSF7-213ENST00000494016 S100A4P26447 101 aaKnown RBP4.4□□□□□ -1.71
CPSF7-213ENST00000494016 LGALS9BQ3B8N2 356 aa4.4□□□□□ -1.71
CPSF7-213ENST00000494016 LGALS9CQ6DKI2 356 aa4.4□□□□□ -1.71
CPSF7-213ENST00000494016 FOXI2Q6ZQN5 318 aa4.4□□□□□ -1.71
CPSF7-213ENST00000494016 KLHL30-AS1Q8NEE0 82 aa4.4□□□□□ -1.71
CPSF7-213ENST00000494016 IFI27L1Q96BM0 104 aa4.4□□□□□ -1.71
CPSF7-213ENST00000494016 C9orf85Q96MD7 179 aa4.4□□□□□ -1.71
CPSF7-213ENST00000494016 DPH3P1Q9H4G8 78 aa4.4□□□□□ -1.71
CPSF7-213ENST00000494016 JPT2Q9H910 190 aa4.4□□□□□ -1.71
CPSF7-213ENST00000494016 ST20Q9HBF5 79 aa4.4□□□□□ -1.71
CPSF7-213ENST00000494016 MRPS16Q9Y3D3 137 aaKnown RBP4.4□□□□□ -1.71
CPSF7-213ENST00000494016 PHLDA3Q9Y5J5 127 aa4.4□□□□□ -1.71
CPSF7-213ENST00000494016 IGHV1OR15-1A0A075B7D0 117 aa4.39□□□□□ -1.71
CPSF7-213ENST00000494016 H3BMM0 161 aa4.39□□□□□ -1.71
CPSF7-213ENST00000494016 TCAPO15273 167 aa4.39□□□□□ -1.71
CPSF7-213ENST00000494016 CD7P09564 240 aa4.39□□□□□ -1.71
CPSF7-213ENST00000494016 RBMY1A1P0DJD3 496 aaKnown RBP4.39□□□□□ -1.71
CPSF7-213ENST00000494016 RBMY1CP0DJD4 496 aa4.39□□□□□ -1.71
CPSF7-213ENST00000494016 TSPOP30536 169 aa4.39□□□□□ -1.71
CPSF7-213ENST00000494016 DEFB131AP59861 70 aa4.39□□□□□ -1.71
CPSF7-213ENST00000494016 LAGE3Q14657 143 aa4.39□□□□□ -1.71
CPSF7-213ENST00000494016 RBMY1FQ15415 496 aaKnown RBP4.39□□□□□ -1.71
CPSF7-213ENST00000494016 MRPL23Q16540 153 aaKnown RBP4.39□□□□□ -1.71
CPSF7-213ENST00000494016 SPINK13Q1W4C9 94 aa4.39□□□□□ -1.71
CPSF7-213ENST00000494016 Q6ZN92 141 aa4.39□□□□□ -1.71
CPSF7-213ENST00000494016 TMEM61Q8N0U2 210 aa4.39□□□□□ -1.71
CPSF7-213ENST00000494016 LINC01006Q8NI28 216 aa4.39□□□□□ -1.71
CPSF7-213ENST00000494016 C20orf78Q9BR46 151 aa4.39□□□□□ -1.71
CPSF7-213ENST00000494016 TENM1Q9UKZ4 2725 aa4.39□□□□□ -1.71
CPSF7-213ENST00000494016 CCL24O00175 119 aa4.38□□□□□ -1.71
CPSF7-213ENST00000494016 CRYGDP07320 174 aa4.38□□□□□ -1.71
CPSF7-213ENST00000494016 SMIM17P0DL12 118 aa4.38□□□□□ -1.71
CPSF7-213ENST00000494016 HLA-DRB4P13762 266 aa4.38□□□□□ -1.71
CPSF7-213ENST00000494016 NUTF2P61970 127 aaKnown RBP4.38□□□□□ -1.71
CPSF7-213ENST00000494016 STPG4Q8N801 248 aa4.38□□□□□ -1.71
CPSF7-213ENST00000494016 RPL39LQ96EH5 51 aaKnown RBP4.38□□□□□ -1.71
CPSF7-213ENST00000494016 C18orf15Q96N68 181 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms