RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 STX12Q86Y82 276 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 BPIFA4PQ86YQ2 179 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 C6orf223Q8N319 242 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 OR10J6PQ8NGY7 276 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 ATP5SQ99766 215 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 SLC50A1Q9BRV3 221 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 CCDC32Q9BV29 185 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 SAMD10Q9BYL1 202 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 OR51M1Q9H341 326 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 BATF3Q9NR55 127 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 ZNF492Q9P255 531 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 TIMM9Q9Y5J7 89 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 DNAH8Q96JB1 4490 aa1.84□□□□□ -2.12
PTCD3-218ENST00000493430 FAT1Q14517 4588 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 MYCBP2O75592 4640 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.83□□□□□ -2.12
PTCD3-218ENST00000493430 TRGV2A0A075B6R0 118 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 IGHV1OR15-1A0A075B7D0 117 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 FXYD6-FXYD2A0A087WZ82 144 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 SPRR5A0A1B0GTR4 108 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 PGPA6NDG6 321 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 LYRM9A8MSI8 78 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 HSBP1L1C9JCN9 74 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 H3BVH4 76 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 H7BYZ3 331 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 SPINK4O60575 86 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 SLC25A5P05141 298 aaKnown RBP1.83□□□□□ -2.12
PTCD3-218ENST00000493430 CD5P06127 495 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 FABP1P07148 127 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 HIST1H1EP10412 219 aaKnown RBP1.83□□□□□ -2.12
PTCD3-218ENST00000493430 M6PRP20645 277 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 RPL12P30050 165 aaKnown RBP1.83□□□□□ -2.12
PTCD3-218ENST00000493430 CRYBA4P53673 196 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 TCL1AP56279 114 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 SELENOTP62341 195 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 LGALS9BQ3B8N2 356 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 CLPSL2Q6UWE3 100 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 PRNTQ86SH4 94 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 EIF4E3Q8N5X7 224 aaKnown RBP1.83□□□□□ -2.12
PTCD3-218ENST00000493430 RXFP4Q8TDU9 374 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 ZC2HC1AQ96GY0 325 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 DERL1Q9BUN8 251 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 SLC25A31Q9H0C2 315 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 PKHD1L1Q86WI1 4243 aa1.83□□□□□ -2.12
PTCD3-218ENST00000493430 TRGV4A0A0C4DH28 118 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 TMEM189A5PLL7 270 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 RBFOX3A6NFN3 312 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 SMIM9A6NGZ8 99 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 FNDC10F2Z333 226 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 ARPC5O15511 151 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 MPDU1O75352 247 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 GCGP01275 180 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 GZMBP10144 247 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 RNASE3P12724 160 aaKnown RBP1.82□□□□□ -2.12
PTCD3-218ENST00000493430 CRISP2P16562 243 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 PVALBP20472 110 aaPredicted RBP1.82□□□□□ -2.12
PTCD3-218ENST00000493430 GCHFRP30047 84 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 TSPOP30536 169 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 CDC34P49427 236 aaPredicted RBP1.82□□□□□ -2.12
PTCD3-218ENST00000493430 CRIP1P50238 77 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 ZNF138P52744 262 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 TAS2R30P59541 319 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 DAZ2Q13117 558 aaKnown RBP1.82□□□□□ -2.12
PTCD3-218ENST00000493430 FAM74A1Q5RGS3 127 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 TMEM78Q5T7P6 136 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 LYPD5Q6UWN5 251 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 DAZ4Q86SG3 579 aaKnown RBP1.82□□□□□ -2.12
PTCD3-218ENST00000493430 Q86TA4 180 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 OR2T35Q8NGX2 323 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 LYPD6BQ8NI32 183 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 GPR82Q96P67 336 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 PFDN5Q99471 154 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 MARVELD1Q9BSK0 173 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 NMES1Q9C002 83 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 TREM1Q9NP99 234 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 DAZ3Q9NR90 486 aaKnown RBP1.82□□□□□ -2.12
PTCD3-218ENST00000493430 TMEM14CQ9P0S9 112 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 MRPS16Q9Y3D3 137 aaKnown RBP1.82□□□□□ -2.12
PTCD3-218ENST00000493430 ARL2-SNX15V9GYD0 113 aa1.82□□□□□ -2.12
PTCD3-218ENST00000493430 A0A087WTM6 91 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 A0A1B0GVG6 124 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 SIVA1O15304 175 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 SH2D1AO60880 128 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 CFDP00746 253 aaPredicted RBP1.81□□□□□ -2.12
PTCD3-218ENST00000493430 TCRAP04437 139 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 CXCL2P19875 107 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 S100A11P31949 105 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 CCL18P55774 89 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 HBG1P69891 147 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 HBG2P69892 147 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 CCL20P78556 96 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 KHDC3LQ587J8 217 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 SOHLH1Q5JUK2 328 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 FAM74A4Q5TZK3 123 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 Q5VSD8 79 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 CFAP126Q5VTH2 177 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 TMEM256Q8N2U0 113 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 SLC25A29Q8N8R3 303 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 C15orf53Q8NAA6 179 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 INO80EQ8NBZ0 244 aaPredicted RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms