RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 GAGE6Q13070 117 aa13.64□□□□□ -0.23
PFDN4-205ENST00000493356 TMEM97Q5BJF2 176 aa13.64□□□□□ -0.23
PFDN4-205ENST00000493356 RPL7L1Q6DKI1 246 aaKnown RBP13.64□□□□□ -0.23
PFDN4-205ENST00000493356 TNXBP22105 4242 aa13.63□□□□□ -0.23
PFDN4-205ENST00000493356 A0A087WYN8 130 aa13.62□□□□□ -0.23
PFDN4-205ENST00000493356 hDV102S1A0JD36 115 aa13.62□□□□□ -0.23
PFDN4-205ENST00000493356 RNF185Q96GF1 192 aa13.62□□□□□ -0.23
PFDN4-205ENST00000493356 DERL1Q9BUN8 251 aa13.62□□□□□ -0.23
PFDN4-205ENST00000493356 ZNF471Q9BX82 626 aaPredicted RBP13.62□□□□□ -0.23
PFDN4-205ENST00000493356 ALG5Q9Y673 324 aa13.62□□□□□ -0.23
PFDN4-205ENST00000493356 IGLV10-54A0A075B6I4 117 aa13.61□□□□□ -0.23
PFDN4-205ENST00000493356 CHTF8P0CG12 524 aa13.61□□□□□ -0.23
PFDN4-205ENST00000493356 TRBV25-1A0A075B6N4 114 aa13.6□□□□□ -0.23
PFDN4-205ENST00000493356 IGHV3-64A0A075B6Q5 118 aa13.6□□□□□ -0.23
PFDN4-205ENST00000493356 A6NHS1 94 aa13.6□□□□□ -0.23
PFDN4-205ENST00000493356 F5H697 171 aa13.6□□□□□ -0.23
PFDN4-205ENST00000493356 CXCL1P09341 107 aa13.6□□□□□ -0.23
PFDN4-205ENST00000493356 REG3AQ06141 175 aa13.6□□□□□ -0.23
PFDN4-205ENST00000493356 Q5BKY6 102 aa13.6□□□□□ -0.23
PFDN4-205ENST00000493356 DPH3Q96FX2 82 aa13.6□□□□□ -0.23
PFDN4-205ENST00000493356 TCEAL7Q9BRU2 100 aa13.6□□□□□ -0.23
PFDN4-205ENST00000493356 BORCS7-ASMTA0A0B4J1R7 106 aa13.59□□□□□ -0.23
PFDN4-205ENST00000493356 MUC21A0A0G2JKD1 596 aa13.59□□□□□ -0.23
PFDN4-205ENST00000493356 MUC21A0A140T8X8 626 aa13.59□□□□□ -0.23
PFDN4-205ENST00000493356 SNAI2O43623 268 aa13.59□□□□□ -0.23
PFDN4-205ENST00000493356 SLPIP03973 132 aa13.59□□□□□ -0.23
PFDN4-205ENST00000493356 IQCJQ1A5X6 159 aa13.59□□□□□ -0.23
PFDN4-205ENST00000493356 SPACA4Q8TDM5 124 aa13.59□□□□□ -0.23
PFDN4-205ENST00000493356 SSBP4Q9BWG4 385 aaPredicted RBP13.59□□□□□ -0.23
PFDN4-205ENST00000493356 MAP1LC3B2A6NCE7 125 aa13.58□□□□□ -0.24
PFDN4-205ENST00000493356 AKR1C3P42330 323 aa13.58□□□□□ -0.24
PFDN4-205ENST00000493356 FHITP49789 147 aa13.58□□□□□ -0.24
PFDN4-205ENST00000493356 AKR1C8PQ5T2L2 129 aa13.58□□□□□ -0.24
PFDN4-205ENST00000493356 MAP1LC3BQ9GZQ8 125 aa13.58□□□□□ -0.24
PFDN4-205ENST00000493356 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.57□□□□□ -0.24
PFDN4-205ENST00000493356 OR5AL1P0C617 328 aa13.57□□□□□ -0.24
PFDN4-205ENST00000493356 SPANXN1Q5VSR9 72 aa13.57□□□□□ -0.24
PFDN4-205ENST00000493356 CST9LP1Q5W188 147 aa13.57□□□□□ -0.24
PFDN4-205ENST00000493356 C20orf203Q8NBC4 194 aa13.57□□□□□ -0.24
PFDN4-205ENST00000493356 INO80EQ8NBZ0 244 aaPredicted RBP13.57□□□□□ -0.24
PFDN4-205ENST00000493356 AP5S1Q9NUS5 200 aa13.57□□□□□ -0.24
PFDN4-205ENST00000493356 KIF25-AS1Q9Y6Z4 181 aa13.57□□□□□ -0.24
PFDN4-205ENST00000493356 TRAV8-4A0A0B4J246 113 aa13.56□□□□□ -0.24
PFDN4-205ENST00000493356 IGHV1-24A0A0C4DH33 117 aa13.56□□□□□ -0.24
PFDN4-205ENST00000493356 PHOX2AO14813 284 aa13.56□□□□□ -0.24
PFDN4-205ENST00000493356 P01737 135 aa13.56□□□□□ -0.24
PFDN4-205ENST00000493356 DPH3P1Q9H4G8 78 aa13.56□□□□□ -0.24
PFDN4-205ENST00000493356 PLAC8Q9NZF1 115 aa13.56□□□□□ -0.24
PFDN4-205ENST00000493356 SSTP61278 116 aa13.55□□□□□ -0.24
PFDN4-205ENST00000493356 STOML3Q8TAV4 291 aa13.55□□□□□ -0.24
PFDN4-205ENST00000493356 LINC01600Q96MT4 127 aa13.54□□□□□ -0.24
PFDN4-205ENST00000493356 MED28Q9H204 178 aa13.54□□□□□ -0.24
PFDN4-205ENST00000493356 SMIM17P0DL12 118 aa13.53□□□□□ -0.24
PFDN4-205ENST00000493356 C7orf33Q8WU49 177 aa13.53□□□□□ -0.24
PFDN4-205ENST00000493356 AP1S3Q96PC3 154 aa13.53□□□□□ -0.24
PFDN4-205ENST00000493356 MLST8Q9BVC4 326 aa13.53□□□□□ -0.24
PFDN4-205ENST00000493356 IGLV4-60A0A075B6I1 120 aa13.52□□□□□ -0.25
PFDN4-205ENST00000493356 RAB5CP51148 216 aa13.52□□□□□ -0.25
PFDN4-205ENST00000493356 ODF1Q14990 250 aa13.52□□□□□ -0.25
PFDN4-205ENST00000493356 GFRA4Q9GZZ7 299 aa13.52□□□□□ -0.25
PFDN4-205ENST00000493356 FXYD6-FXYD2A0A087WZ82 144 aa13.51□□□□□ -0.25
PFDN4-205ENST00000493356 A0A1B0GUV1 79 aa13.51□□□□□ -0.25
PFDN4-205ENST00000493356 PAGE4O60829 102 aa13.51□□□□□ -0.25
PFDN4-205ENST00000493356 GIPP09681 153 aaPredicted RBP13.51□□□□□ -0.25
PFDN4-205ENST00000493356 GZMBP10144 247 aa13.51□□□□□ -0.25
PFDN4-205ENST00000493356 M0QY20 66 aa13.5□□□□□ -0.25
PFDN4-205ENST00000493356 S100A9P06702 114 aaKnown RBP13.5□□□□□ -0.25
PFDN4-205ENST00000493356 BAGE2Q86Y30 109 aa13.49□□□□□ -0.25
PFDN4-205ENST00000493356 TMEM243Q9BU79 118 aa13.49□□□□□ -0.25
PFDN4-205ENST00000493356 SCO2A0A1W2PP80 73 aa13.48□□□□□ -0.25
PFDN4-205ENST00000493356 COX6A2Q02221 97 aa13.48□□□□□ -0.25
PFDN4-205ENST00000493356 C15orf56Q8N910 161 aa13.48□□□□□ -0.25
PFDN4-205ENST00000493356 H7C1H1 209 aa13.47□□□□□ -0.25
PFDN4-205ENST00000493356 MGPP08493 103 aa13.47□□□□□ -0.25
PFDN4-205ENST00000493356 PRR3P79522 188 aaKnown RBP13.47□□□□□ -0.25
PFDN4-205ENST00000493356 SUMO4Q6EEV6 95 aa13.47□□□□□ -0.25
PFDN4-205ENST00000493356 GTSF1Q8WW33 167 aa13.47□□□□□ -0.25
PFDN4-205ENST00000493356 WDR73Q6P4I2 378 aa13.46□□□□□ -0.25
PFDN4-205ENST00000493356 CYTL1Q9NRR1 136 aa13.46□□□□□ -0.25
PFDN4-205ENST00000493356 NKX2-5P52952 324 aaPredicted RBP13.45□□□□□ -0.26
PFDN4-205ENST00000493356 MAJINQ3KP22 176 aa13.45□□□□□ -0.26
PFDN4-205ENST00000493356 PRSS3P2Q8NHM4 247 aa13.45□□□□□ -0.26
PFDN4-205ENST00000493356 A0A0J9YXV3 536 aa13.44□□□□□ -0.26
PFDN4-205ENST00000493356 NDUFS6O75380 124 aaKnown RBP13.44□□□□□ -0.26
PFDN4-205ENST00000493356 RPS10P46783 165 aaKnown RBP13.44□□□□□ -0.26
PFDN4-205ENST00000493356 IGKV2-24A0A0C4DH68 120 aa13.43□□□□□ -0.26
PFDN4-205ENST00000493356 SULT1A2P50226 295 aa13.43□□□□□ -0.26
PFDN4-205ENST00000493356 CFAP161Q6P656 301 aa13.43□□□□□ -0.26
PFDN4-205ENST00000493356 PGLYRP4Q96LB8 373 aa13.43□□□□□ -0.26
PFDN4-205ENST00000493356 GAGE12HA6NDE8 117 aa13.42□□□□□ -0.26
PFDN4-205ENST00000493356 KRTAP10-8P60410 259 aa13.42□□□□□ -0.26
PFDN4-205ENST00000493356 RASL11AQ6T310 242 aa13.42□□□□□ -0.26
PFDN4-205ENST00000493356 STPG4Q8N801 248 aa13.42□□□□□ -0.26
PFDN4-205ENST00000493356 TPPP3Q9BW30 176 aa13.42□□□□□ -0.26
PFDN4-205ENST00000493356 A0A1B0GV50 99 aa13.41□□□□□ -0.26
PFDN4-205ENST00000493356 G3V3Q6 166 aa13.41□□□□□ -0.26
PFDN4-205ENST00000493356 UBE2L6O14933 153 aa13.41□□□□□ -0.26
PFDN4-205ENST00000493356 PFDN1O60925 122 aa13.41□□□□□ -0.26
PFDN4-205ENST00000493356 IGLC6P0CF74 106 aa13.41□□□□□ -0.26
PFDN4-205ENST00000493356 HIGD2BQ4VC39 106 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms