RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 CXorf1O96002 111 aa6.2□□□□□ -1.42
TNFRSF9-203ENST00000492571 MBP02144 154 aa6.2□□□□□ -1.42
TNFRSF9-203ENST00000492571 STAG3L2P0CL84 134 aa6.2□□□□□ -1.42
TNFRSF9-203ENST00000492571 STAG3L3P0CL85 134 aa6.2□□□□□ -1.42
TNFRSF9-203ENST00000492571 GCHFRP30047 84 aa6.2□□□□□ -1.42
TNFRSF9-203ENST00000492571 CNBPP62633 177 aaKnown RBP6.2□□□□□ -1.42
TNFRSF9-203ENST00000492571 LINC00269Q8N2A0 174 aa6.2□□□□□ -1.42
TNFRSF9-203ENST00000492571 GTSF1Q8WW33 167 aa6.2□□□□□ -1.42
TNFRSF9-203ENST00000492571 ARL2-SNX15V9GYD0 113 aa6.2□□□□□ -1.42
TNFRSF9-203ENST00000492571 GRIFINA4D1Z8 144 aa6.19□□□□□ -1.42
TNFRSF9-203ENST00000492571 KRBOX1C9JBD0 128 aa6.19□□□□□ -1.42
TNFRSF9-203ENST00000492571 INMT-MINDY4F8WBC2 141 aa6.19□□□□□ -1.42
TNFRSF9-203ENST00000492571 PANO1I0J062 215 aa6.19□□□□□ -1.42
TNFRSF9-203ENST00000492571 PHOX2AO14813 284 aa6.19□□□□□ -1.42
TNFRSF9-203ENST00000492571 RAB4BP61018 213 aa6.19□□□□□ -1.42
TNFRSF9-203ENST00000492571 IFITM3Q01628 133 aa6.19□□□□□ -1.42
TNFRSF9-203ENST00000492571 CIRBPQ14011 172 aaKnown RBP6.19□□□□□ -1.42
TNFRSF9-203ENST00000492571 ZNF56Q15929 161 aa6.19□□□□□ -1.42
TNFRSF9-203ENST00000492571 DNLZQ5SXM8 178 aa6.19□□□□□ -1.42
TNFRSF9-203ENST00000492571 REG3GQ6UW15 175 aa6.19□□□□□ -1.42
TNFRSF9-203ENST00000492571 CLPSL2Q6UWE3 100 aa6.19□□□□□ -1.42
TNFRSF9-203ENST00000492571 OR10G8Q8NGN5 311 aa6.19□□□□□ -1.42
TNFRSF9-203ENST00000492571 RAB24Q969Q5 203 aa6.19□□□□□ -1.42
TNFRSF9-203ENST00000492571 MARVELD1Q9BSK0 173 aa6.19□□□□□ -1.42
TNFRSF9-203ENST00000492571 TRBV25-1A0A075B6N4 114 aa6.18□□□□□ -1.42
TNFRSF9-203ENST00000492571 TRAV8-4A0A0B4J246 113 aa6.18□□□□□ -1.42
TNFRSF9-203ENST00000492571 TRAV34A0A0B4J273 112 aa6.18□□□□□ -1.42
TNFRSF9-203ENST00000492571 A0A1W2PRE2 83 aa6.18□□□□□ -1.42
TNFRSF9-203ENST00000492571 F5H697 171 aa6.18□□□□□ -1.42
TNFRSF9-203ENST00000492571 MPC2O95563 127 aa6.18□□□□□ -1.42
TNFRSF9-203ENST00000492571 P01737 135 aa6.18□□□□□ -1.42
TNFRSF9-203ENST00000492571 GZMBP10144 247 aa6.18□□□□□ -1.42
TNFRSF9-203ENST00000492571 H2BFSP57053 126 aa6.18□□□□□ -1.42
TNFRSF9-203ENST00000492571 FAM162BQ5T6X4 162 aa6.18□□□□□ -1.42
TNFRSF9-203ENST00000492571 WDR73Q6P4I2 378 aa6.18□□□□□ -1.42
TNFRSF9-203ENST00000492571 SUN5Q8TC36 379 aa6.18□□□□□ -1.42
TNFRSF9-203ENST00000492571 DERL1Q9BUN8 251 aa6.18□□□□□ -1.42
TNFRSF9-203ENST00000492571 NKX6-2Q9C056 277 aaPredicted RBP6.18□□□□□ -1.42
TNFRSF9-203ENST00000492571 ACTR3CQ9C0K3 210 aaPredicted RBP6.18□□□□□ -1.42
TNFRSF9-203ENST00000492571 PRR34Q9NV39 138 aa6.18□□□□□ -1.42
TNFRSF9-203ENST00000492571 ZFP30Q9Y2G7 519 aa6.18□□□□□ -1.42
TNFRSF9-203ENST00000492571 TMSB15BA0A087X1C1 80 aa6.17□□□□□ -1.42
TNFRSF9-203ENST00000492571 SSNA1O43805 119 aa6.17□□□□□ -1.42
TNFRSF9-203ENST00000492571 GAS8-AS1O95177 125 aa6.17□□□□□ -1.42
TNFRSF9-203ENST00000492571 DEFA1P59665 94 aa6.17□□□□□ -1.42
TNFRSF9-203ENST00000492571 DEFA3P59666 94 aa6.17□□□□□ -1.42
TNFRSF9-203ENST00000492571 UBE2G1P62253 170 aa6.17□□□□□ -1.42
TNFRSF9-203ENST00000492571 RBX1P62877 108 aa6.17□□□□□ -1.42
TNFRSF9-203ENST00000492571 REG3AQ06141 175 aa6.17□□□□□ -1.42
TNFRSF9-203ENST00000492571 GAGE6Q13070 117 aa6.17□□□□□ -1.42
TNFRSF9-203ENST00000492571 CFAP161Q6P656 301 aa6.17□□□□□ -1.42
TNFRSF9-203ENST00000492571 HIST1H2BAQ96A08 127 aa6.17□□□□□ -1.42
TNFRSF9-203ENST00000492571 TNXBP22105 4242 aa6.17□□□□□ -1.42
TNFRSF9-203ENST00000492571 IGLV10-54A0A075B6I4 117 aa6.16□□□□□ -1.42
TNFRSF9-203ENST00000492571 A0A0J9YXV3 536 aa6.16□□□□□ -1.42
TNFRSF9-203ENST00000492571 SH2D1AO60880 128 aa6.16□□□□□ -1.42
TNFRSF9-203ENST00000492571 SMIM17P0DL12 118 aa6.16□□□□□ -1.42
TNFRSF9-203ENST00000492571 SERF2P84101 59 aa6.16□□□□□ -1.42
TNFRSF9-203ENST00000492571 NEXN-AS1Q8NBZ9 246 aa6.16□□□□□ -1.42
TNFRSF9-203ENST00000492571 SPACA4Q8TDM5 124 aa6.16□□□□□ -1.42
TNFRSF9-203ENST00000492571 ZNF471Q9BX82 626 aaPredicted RBP6.16□□□□□ -1.42
TNFRSF9-203ENST00000492571 PLAC8Q9NZF1 115 aa6.16□□□□□ -1.42
TNFRSF9-203ENST00000492571 KIF25-AS1Q9Y6Z4 181 aa6.16□□□□□ -1.42
TNFRSF9-203ENST00000492571 TRBV6-1A0A0K0K1D8 114 aa6.15□□□□□ -1.42
TNFRSF9-203ENST00000492571 PEX7O00628 323 aa6.15□□□□□ -1.42
TNFRSF9-203ENST00000492571 CHTF8P0CG12 524 aa6.15□□□□□ -1.42
TNFRSF9-203ENST00000492571 ODF1Q14990 250 aa6.15□□□□□ -1.42
TNFRSF9-203ENST00000492571 MAJINQ3KP22 176 aa6.15□□□□□ -1.42
TNFRSF9-203ENST00000492571 SPINK6Q6UWN8 80 aa6.15□□□□□ -1.42
TNFRSF9-203ENST00000492571 Q86TA4 180 aa6.15□□□□□ -1.42
TNFRSF9-203ENST00000492571 PSMG3Q9BT73 122 aaPredicted RBP6.15□□□□□ -1.42
TNFRSF9-203ENST00000492571 WFDC1Q9HC57 220 aa6.15□□□□□ -1.42
TNFRSF9-203ENST00000492571 IGHV1-24A0A0C4DH33 117 aa6.14□□□□□ -1.43
TNFRSF9-203ENST00000492571 CRIP1P50238 77 aa6.14□□□□□ -1.43
TNFRSF9-203ENST00000492571 RAB5CP51148 216 aa6.14□□□□□ -1.43
TNFRSF9-203ENST00000492571 COX6A2Q02221 97 aa6.14□□□□□ -1.43
TNFRSF9-203ENST00000492571 SPANXN1Q5VSR9 72 aa6.14□□□□□ -1.43
TNFRSF9-203ENST00000492571 FMC1Q96HJ9 113 aa6.14□□□□□ -1.43
TNFRSF9-203ENST00000492571 TNFSF18Q9UNG2 199 aa6.14□□□□□ -1.43
TNFRSF9-203ENST00000492571 PKIGQ9Y2B9 76 aa6.14□□□□□ -1.43
TNFRSF9-203ENST00000492571 IGKV2-24A0A0C4DH68 120 aa6.13□□□□□ -1.43
TNFRSF9-203ENST00000492571 NDUFS6O75380 124 aaKnown RBP6.13□□□□□ -1.43
TNFRSF9-203ENST00000492571 ATP6V0CP27449 155 aa6.13□□□□□ -1.43
TNFRSF9-203ENST00000492571 RPS10P46783 165 aaKnown RBP6.13□□□□□ -1.43
TNFRSF9-203ENST00000492571 SULT1A2P50226 295 aa6.13□□□□□ -1.43
TNFRSF9-203ENST00000492571 UBE2G2P60604 165 aa6.13□□□□□ -1.43
TNFRSF9-203ENST00000492571 PRR3P79522 188 aaKnown RBP6.13□□□□□ -1.43
TNFRSF9-203ENST00000492571 PRR27Q6MZM9 219 aa6.13□□□□□ -1.43
TNFRSF9-203ENST00000492571 KRTAP26-1Q6PEX3 210 aa6.13□□□□□ -1.43
TNFRSF9-203ENST00000492571 STPG4Q8N801 248 aa6.13□□□□□ -1.43
TNFRSF9-203ENST00000492571 LYPD6BQ8NI32 183 aa6.13□□□□□ -1.43
TNFRSF9-203ENST00000492571 LINC00474Q9P2X8 69 aa6.13□□□□□ -1.43
TNFRSF9-203ENST00000492571 VAX2Q9UIW0 290 aa6.13□□□□□ -1.43
TNFRSF9-203ENST00000492571 H7C1H1 209 aa6.12□□□□□ -1.43
TNFRSF9-203ENST00000492571 ZNF561-AS1K7EIQ3 104 aa6.12□□□□□ -1.43
TNFRSF9-203ENST00000492571 UBE2L6O14933 153 aa6.12□□□□□ -1.43
TNFRSF9-203ENST00000492571 KRTAP10-8P60410 259 aa6.12□□□□□ -1.43
TNFRSF9-203ENST00000492571 IQCJQ1A5X6 159 aa6.12□□□□□ -1.43
TNFRSF9-203ENST00000492571 ZNF674Q2M3X9 581 aa6.12□□□□□ -1.43
TNFRSF9-203ENST00000492571 NTM-AS1Q6ZSK4 140 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms