RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 CNBPP62633 177 aaKnown RBP8.7□□□□□ -1.02
GPNMB-213ENST00000492512 ODF1Q14990 250 aa8.7□□□□□ -1.02
GPNMB-213ENST00000492512 EIF5AL1Q6IS14 154 aaKnown RBP8.7□□□□□ -1.02
GPNMB-213ENST00000492512 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.7□□□□□ -1.02
GPNMB-213ENST00000492512 OR10G8Q8NGN5 311 aa8.7□□□□□ -1.02
GPNMB-213ENST00000492512 RAB24Q969Q5 203 aa8.7□□□□□ -1.02
GPNMB-213ENST00000492512 LINC01600Q96MT4 127 aa8.7□□□□□ -1.02
GPNMB-213ENST00000492512 TMEM167BQ9NRX6 74 aa8.7□□□□□ -1.02
GPNMB-213ENST00000492512 hDV102S1A0JD36 115 aa8.69□□□□□ -1.02
GPNMB-213ENST00000492512 PHOX2AO14813 284 aa8.69□□□□□ -1.02
GPNMB-213ENST00000492512 KRTAP26-1Q6PEX3 210 aa8.69□□□□□ -1.02
GPNMB-213ENST00000492512 ZFP82Q8N141 532 aa8.69□□□□□ -1.02
GPNMB-213ENST00000492512 C7orf33Q8WU49 177 aa8.69□□□□□ -1.02
GPNMB-213ENST00000492512 PRR34Q9NV39 138 aa8.69□□□□□ -1.02
GPNMB-213ENST00000492512 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.68□□□□□ -1.02
GPNMB-213ENST00000492512 CHTF8P0CG12 524 aa8.68□□□□□ -1.02
GPNMB-213ENST00000492512 ALKAL2Q6UX46 152 aa8.68□□□□□ -1.02
GPNMB-213ENST00000492512 LINC00269Q8N2A0 174 aa8.68□□□□□ -1.02
GPNMB-213ENST00000492512 NEXN-AS1Q8NBZ9 246 aa8.68□□□□□ -1.02
GPNMB-213ENST00000492512 CYTL1Q9NRR1 136 aa8.68□□□□□ -1.02
GPNMB-213ENST00000492512 TMSB15BA0A087X1C1 80 aa8.67□□□□□ -1.02
GPNMB-213ENST00000492512 SH2D1AO60880 128 aa8.67□□□□□ -1.02
GPNMB-213ENST00000492512 CXorf1O96002 111 aa8.67□□□□□ -1.02
GPNMB-213ENST00000492512 CRIP1P50238 77 aa8.67□□□□□ -1.02
GPNMB-213ENST00000492512 RBX1P62877 108 aa8.67□□□□□ -1.02
GPNMB-213ENST00000492512 ZNF56Q15929 161 aa8.67□□□□□ -1.02
GPNMB-213ENST00000492512 Q86TA4 180 aa8.67□□□□□ -1.02
GPNMB-213ENST00000492512 COMMD7Q86VX2 200 aa8.67□□□□□ -1.02
GPNMB-213ENST00000492512 SPACA4Q8TDM5 124 aa8.67□□□□□ -1.02
GPNMB-213ENST00000492512 AP5S1Q9NUS5 200 aa8.67□□□□□ -1.02
GPNMB-213ENST00000492512 KIF25-AS1Q9Y6Z4 181 aa8.67□□□□□ -1.02
GPNMB-213ENST00000492512 IGLV10-54A0A075B6I4 117 aa8.66□□□□□ -1.02
GPNMB-213ENST00000492512 BORCS7-ASMTA0A0B4J1R7 106 aa8.66□□□□□ -1.02
GPNMB-213ENST00000492512 A0A1W2PRE2 83 aa8.66□□□□□ -1.02
GPNMB-213ENST00000492512 GAS8-AS1O95177 125 aa8.66□□□□□ -1.02
GPNMB-213ENST00000492512 RAB4BP61018 213 aa8.66□□□□□ -1.02
GPNMB-213ENST00000492512 TMEM97Q5BJF2 176 aa8.66□□□□□ -1.02
GPNMB-213ENST00000492512 FAM162BQ5T6X4 162 aa8.66□□□□□ -1.02
GPNMB-213ENST00000492512 PEX7O00628 323 aa8.65□□□□□ -1.02
GPNMB-213ENST00000492512 GAGE6Q13070 117 aa8.65□□□□□ -1.02
GPNMB-213ENST00000492512 WDR73Q6P4I2 378 aa8.65□□□□□ -1.02
GPNMB-213ENST00000492512 NTM-AS1Q6ZSK4 140 aa8.65□□□□□ -1.02
GPNMB-213ENST00000492512 PLAC8Q9NZF1 115 aa8.65□□□□□ -1.02
GPNMB-213ENST00000492512 A0A0J9YXV3 536 aa8.64□□□□□ -1.03
GPNMB-213ENST00000492512 MBP02144 154 aa8.64□□□□□ -1.03
GPNMB-213ENST00000492512 REG3AQ06141 175 aa8.64□□□□□ -1.03
GPNMB-213ENST00000492512 PRR27Q6MZM9 219 aa8.64□□□□□ -1.03
GPNMB-213ENST00000492512 GTSF1Q8WW33 167 aa8.64□□□□□ -1.03
GPNMB-213ENST00000492512 ACTR3CQ9C0K3 210 aaPredicted RBP8.64□□□□□ -1.03
GPNMB-213ENST00000492512 TRBV25-1A0A075B6N4 114 aa8.63□□□□□ -1.03
GPNMB-213ENST00000492512 SLPIP03973 132 aa8.63□□□□□ -1.03
GPNMB-213ENST00000492512 LINC01559Q495D7 138 aa8.63□□□□□ -1.03
GPNMB-213ENST00000492512 RPL7L1Q6DKI1 246 aaKnown RBP8.63□□□□□ -1.03
GPNMB-213ENST00000492512 COX8CQ7Z4L0 72 aa8.63□□□□□ -1.03
GPNMB-213ENST00000492512 PSMG3Q9BT73 122 aaPredicted RBP8.63□□□□□ -1.03
GPNMB-213ENST00000492512 DERL1Q9BUN8 251 aa8.63□□□□□ -1.03
GPNMB-213ENST00000492512 ZFP30Q9Y2G7 519 aa8.63□□□□□ -1.03
GPNMB-213ENST00000492512 TRAV8-4A0A0B4J246 113 aa8.62□□□□□ -1.03
GPNMB-213ENST00000492512 P01737 135 aa8.62□□□□□ -1.03
GPNMB-213ENST00000492512 ATP6V0CP27449 155 aa8.62□□□□□ -1.03
GPNMB-213ENST00000492512 UBE2G2P60604 165 aa8.62□□□□□ -1.03
GPNMB-213ENST00000492512 PRR3P79522 188 aaKnown RBP8.62□□□□□ -1.03
GPNMB-213ENST00000492512 SERF2P84101 59 aa8.62□□□□□ -1.03
GPNMB-213ENST00000492512 HIST1H2BAQ96A08 127 aa8.62□□□□□ -1.03
GPNMB-213ENST00000492512 VAX2Q9UIW0 290 aa8.62□□□□□ -1.03
GPNMB-213ENST00000492512 TRBV6-1A0A0K0K1D8 114 aa8.61□□□□□ -1.03
GPNMB-213ENST00000492512 F5H697 171 aa8.61□□□□□ -1.03
GPNMB-213ENST00000492512 RAB5CP51148 216 aa8.61□□□□□ -1.03
GPNMB-213ENST00000492512 KRTAP10-8P60410 259 aa8.61□□□□□ -1.03
GPNMB-213ENST00000492512 UBE2G1P62253 170 aa8.61□□□□□ -1.03
GPNMB-213ENST00000492512 BLOC1S1P78537 153 aa8.61□□□□□ -1.03
GPNMB-213ENST00000492512 ZNF674Q2M3X9 581 aa8.61□□□□□ -1.03
GPNMB-213ENST00000492512 REG3GQ6UW15 175 aa8.61□□□□□ -1.03
GPNMB-213ENST00000492512 RAB19A4D1S5 217 aa8.6□□□□□ -1.03
GPNMB-213ENST00000492512 SULT1A2P50226 295 aa8.6□□□□□ -1.03
GPNMB-213ENST00000492512 COX6A2Q02221 97 aa8.6□□□□□ -1.03
GPNMB-213ENST00000492512 MAJINQ3KP22 176 aa8.6□□□□□ -1.03
GPNMB-213ENST00000492512 UQCC3Q6UW78 93 aa8.6□□□□□ -1.03
GPNMB-213ENST00000492512 OR10AG1Q8NH19 301 aa8.6□□□□□ -1.03
GPNMB-213ENST00000492512 FMC1Q96HJ9 113 aa8.6□□□□□ -1.03
GPNMB-213ENST00000492512 NKX6-2Q9C056 277 aaPredicted RBP8.6□□□□□ -1.03
GPNMB-213ENST00000492512 IGHV1-24A0A0C4DH33 117 aa8.59□□□□□ -1.03
GPNMB-213ENST00000492512 TEX46H3BTG2 121 aa8.59□□□□□ -1.03
GPNMB-213ENST00000492512 GZMBP10144 247 aa8.59□□□□□ -1.03
GPNMB-213ENST00000492512 IQCJQ1A5X6 159 aa8.59□□□□□ -1.03
GPNMB-213ENST00000492512 IGKV2-24A0A0C4DH68 120 aa8.58□□□□□ -1.04
GPNMB-213ENST00000492512 FAM74A7A6NL05 159 aa8.58□□□□□ -1.04
GPNMB-213ENST00000492512 SPINK6Q6UWN8 80 aa8.58□□□□□ -1.04
GPNMB-213ENST00000492512 STPG4Q8N801 248 aa8.58□□□□□ -1.04
GPNMB-213ENST00000492512 C20orf203Q8NBC4 194 aa8.58□□□□□ -1.04
GPNMB-213ENST00000492512 LYPD6BQ8NI32 183 aa8.58□□□□□ -1.04
GPNMB-213ENST00000492512 CTXND1A0A1B0GTU2 59 aa8.57□□□□□ -1.04
GPNMB-213ENST00000492512 UMAD1C9J7I0 102 aa8.57□□□□□ -1.04
GPNMB-213ENST00000492512 NDUFS6O75380 124 aaKnown RBP8.57□□□□□ -1.04
GPNMB-213ENST00000492512 RPS10P46783 165 aaKnown RBP8.57□□□□□ -1.04
GPNMB-213ENST00000492512 SPANXN1Q5VSR9 72 aa8.57□□□□□ -1.04
GPNMB-213ENST00000492512 IGLV4-60A0A075B6I1 120 aa8.56□□□□□ -1.04
GPNMB-213ENST00000492512 MUC21A0A0G2JKD1 596 aa8.56□□□□□ -1.04
GPNMB-213ENST00000492512 MUC21A0A140T8X8 626 aa8.56□□□□□ -1.04
GPNMB-213ENST00000492512 LTAP01374 205 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms