RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, human

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-222	ENST00000492423	COA6	Q5JTJ3	125 aa	Known RBP	10.53	□□□□□ -0.72
COPS7B-222	ENST00000492423		Q8N3U1	123 aa		10.53	□□□□□ -0.72
COPS7B-222	ENST00000492423	URB1-AS1	Q96HZ7	61 aa		10.53	□□□□□ -0.72
COPS7B-222	ENST00000492423	TEX48	A0A1B0GUV7	120 aa		10.52	□□□□□ -0.73
COPS7B-222	ENST00000492423	CIDEA	O60543	219 aa		10.52	□□□□□ -0.73
COPS7B-222	ENST00000492423		P0DMU3	169 aa		10.52	□□□□□ -0.73
COPS7B-222	ENST00000492423	FAM231A	P0DMU4	169 aa		10.52	□□□□□ -0.73
COPS7B-222	ENST00000492423	FAM231C	P0DMU5	169 aa		10.52	□□□□□ -0.73
COPS7B-222	ENST00000492423	DAD1	P61803	113 aa		10.52	□□□□□ -0.73
COPS7B-222	ENST00000492423	FHL2	Q14192	279 aa		10.52	□□□□□ -0.73
COPS7B-222	ENST00000492423	PRSS47	A8MTI9	375 aa		10.51	□□□□□ -0.73
COPS7B-222	ENST00000492423	MAP1LC3A	Q9H492	121 aa		10.51	□□□□□ -0.73
COPS7B-222	ENST00000492423		Q9UF83	564 aa		10.51	□□□□□ -0.73
COPS7B-222	ENST00000492423	TG	P01266	2768 aa		10.51	□□□□□ -0.73
COPS7B-222	ENST00000492423	IGLV2-18	A0A075B6J9	118 aa		10.5	□□□□□ -0.73
COPS7B-222	ENST00000492423	TRBV6-5	A0A0K0K1A5	114 aa		10.5	□□□□□ -0.73
COPS7B-222	ENST00000492423		H7C1H1	209 aa		10.5	□□□□□ -0.73
COPS7B-222	ENST00000492423		K7EQD1	137 aa		10.5	□□□□□ -0.73
COPS7B-222	ENST00000492423	NUPR1	O60356	82 aa		10.5	□□□□□ -0.73
COPS7B-222	ENST00000492423	HOXA5	P20719	270 aa		10.5	□□□□□ -0.73
COPS7B-222	ENST00000492423	C12orf74	Q32Q52	190 aa		10.5	□□□□□ -0.73
COPS7B-222	ENST00000492423	NEXN-AS1	Q8NBZ9	246 aa		10.5	□□□□□ -0.73
COPS7B-222	ENST00000492423	ZMAT4	Q9H898	229 aa		10.5	□□□□□ -0.73
COPS7B-222	ENST00000492423	TRGV4	A0A0C4DH28	118 aa		10.49	□□□□□ -0.73
COPS7B-222	ENST00000492423	LOC389332	A0A1B0GUA5	103 aa		10.49	□□□□□ -0.73
COPS7B-222	ENST00000492423	SERF1A	O75920	110 aa		10.49	□□□□□ -0.73
COPS7B-222	ENST00000492423	PPP1R17	O96001	155 aa		10.49	□□□□□ -0.73
COPS7B-222	ENST00000492423	SUMO2	P61956	95 aa	Known RBP	10.49	□□□□□ -0.73
COPS7B-222	ENST00000492423	BAGE3	Q86Y29	109 aa		10.49	□□□□□ -0.73
COPS7B-222	ENST00000492423	C20orf78	Q9BR46	151 aa		10.49	□□□□□ -0.73
COPS7B-222	ENST00000492423	SMIM2	Q9BVW6	85 aa		10.49	□□□□□ -0.73
COPS7B-222	ENST00000492423	NIT2	Q9NQR4	276 aa		10.49	□□□□□ -0.73
COPS7B-222	ENST00000492423	TRBV6-4	A0A1B0GX49	114 aa		10.48	□□□□□ -0.73
COPS7B-222	ENST00000492423	C5orf52	A6NGY3	159 aa		10.48	□□□□□ -0.73
COPS7B-222	ENST00000492423	S100A6	P06703	90 aa		10.48	□□□□□ -0.73
COPS7B-222	ENST00000492423	IFI27	P40305	119 aa	Predicted RBP	10.48	□□□□□ -0.73
COPS7B-222	ENST00000492423	POLR2K	P53803	58 aa	Known RBP	10.48	□□□□□ -0.73
COPS7B-222	ENST00000492423	RPL32	P62910	135 aa	Known RBP	10.48	□□□□□ -0.73
COPS7B-222	ENST00000492423	NIT1	Q86X76	327 aa		10.48	□□□□□ -0.73
COPS7B-222	ENST00000492423	SLC25A29	Q8N8R3	303 aa		10.48	□□□□□ -0.73
COPS7B-222	ENST00000492423	ATP5G1	P05496	136 aa		10.47	□□□□□ -0.73
COPS7B-222	ENST00000492423	ESD	P10768	282 aa		10.47	□□□□□ -0.73
COPS7B-222	ENST00000492423	SNRPE	P62304	92 aa	Known RBP	10.47	□□□□□ -0.73
COPS7B-222	ENST00000492423	RNASEK	Q6P5S7	137 aa	Known RBP	10.47	□□□□□ -0.73
COPS7B-222	ENST00000492423		Q8N8P6	123 aa		10.47	□□□□□ -0.73
COPS7B-222	ENST00000492423	TMEM70	Q9BUB7	260 aa		10.47	□□□□□ -0.73
COPS7B-222	ENST00000492423	ST20	Q9HBF5	79 aa		10.47	□□□□□ -0.73
COPS7B-222	ENST00000492423	TRBV10-1	A0A0K0K1A3	114 aa		10.46	□□□□□ -0.73
COPS7B-222	ENST00000492423	LOC100131303	A0A0U1RQF7	123 aa		10.46	□□□□□ -0.73
COPS7B-222	ENST00000492423	SDHAF1	A6NFY7	115 aa		10.46	□□□□□ -0.73
COPS7B-222	ENST00000492423	LINC01546	A6NGU7	62 aa		10.46	□□□□□ -0.73
COPS7B-222	ENST00000492423	NEGR1	Q7Z3B1	354 aa		10.46	□□□□□ -0.73
COPS7B-222	ENST00000492423	PRSS3P2	Q8NHM4	247 aa		10.46	□□□□□ -0.73
COPS7B-222	ENST00000492423	DNAJC30	Q96LL9	226 aa		10.46	□□□□□ -0.73
COPS7B-222	ENST00000492423	NXT2	Q9NPJ8	142 aa	Known RBP	10.46	□□□□□ -0.73
COPS7B-222	ENST00000492423	LINC00694	P0DN24	101 aa		10.45	□□□□□ -0.74
COPS7B-222	ENST00000492423	PMCH	P20382	165 aa		10.45	□□□□□ -0.74
COPS7B-222	ENST00000492423	CRYBA4	P53673	196 aa		10.45	□□□□□ -0.74
COPS7B-222	ENST00000492423	NANOS2	P60321	138 aa	Known RBP	10.45	□□□□□ -0.74
COPS7B-222	ENST00000492423	RHOH	Q15669	191 aa		10.45	□□□□□ -0.74
COPS7B-222	ENST00000492423	FA2H	Q7L5A8	372 aa		10.45	□□□□□ -0.74
COPS7B-222	ENST00000492423	HIST3H2BB	Q8N257	126 aa		10.45	□□□□□ -0.74
COPS7B-222	ENST00000492423	TENM3	Q9P273	2699 aa		10.44	□□□□□ -0.74
COPS7B-222	ENST00000492423	LINC00614	P0C842	121 aa		10.44	□□□□□ -0.74
COPS7B-222	ENST00000492423		Q6ZTC4	211 aa		10.44	□□□□□ -0.74
COPS7B-222	ENST00000492423	C11orf45	Q8TAV5	145 aa		10.44	□□□□□ -0.74
COPS7B-222	ENST00000492423	CHCHD1	Q96BP2	118 aa	Known RBP	10.44	□□□□□ -0.74
COPS7B-222	ENST00000492423	PRO0255	Q9UI72	69 aa		10.44	□□□□□ -0.74
COPS7B-222	ENST00000492423	HHLA3	Q9XRX5	114 aa		10.44	□□□□□ -0.74
COPS7B-222	ENST00000492423	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.44	□□□□□ -0.74
COPS7B-222	ENST00000492423	TRBV27	A0A0K0K1C4	114 aa		10.43	□□□□□ -0.74
COPS7B-222	ENST00000492423		F5H768	121 aa		10.43	□□□□□ -0.74
COPS7B-222	ENST00000492423	NHLRC4	P0CG21	123 aa	Predicted RBP	10.43	□□□□□ -0.74
COPS7B-222	ENST00000492423	HTN3	P15516	51 aa		10.43	□□□□□ -0.74
COPS7B-222	ENST00000492423	PDZD11	Q5EBL8	140 aa		10.43	□□□□□ -0.74
COPS7B-222	ENST00000492423	ZNRF2	Q8NHG8	242 aa		10.43	□□□□□ -0.74
COPS7B-222	ENST00000492423	VSIG2	Q96IQ7	327 aa		10.43	□□□□□ -0.74
COPS7B-222	ENST00000492423	AP5S1	Q9NUS5	200 aa		10.43	□□□□□ -0.74
COPS7B-222	ENST00000492423	TNFRSF18	Q9Y5U5	241 aa		10.43	□□□□□ -0.74
COPS7B-222	ENST00000492423	TRBV7-3	A0A075B6L6	115 aa		10.42	□□□□□ -0.74
COPS7B-222	ENST00000492423		A0A096LNJ9	63 aa		10.42	□□□□□ -0.74
COPS7B-222	ENST00000492423	GAGE12J	A6NER3	117 aa		10.42	□□□□□ -0.74
COPS7B-222	ENST00000492423	IFITM10	A6NMD0	228 aa		10.42	□□□□□ -0.74
COPS7B-222	ENST00000492423	TCAP	O15273	167 aa		10.42	□□□□□ -0.74
COPS7B-222	ENST00000492423	UBE2D3	P61077	147 aa		10.42	□□□□□ -0.74
COPS7B-222	ENST00000492423	UBE2D2	P62837	147 aa		10.42	□□□□□ -0.74
COPS7B-222	ENST00000492423	RPL36A	P83881	106 aa	Known RBP	10.42	□□□□□ -0.74
COPS7B-222	ENST00000492423	GAGE1	Q13065	139 aa		10.42	□□□□□ -0.74
COPS7B-222	ENST00000492423	GAGE4	Q13068	117 aa		10.42	□□□□□ -0.74
COPS7B-222	ENST00000492423	GAGE5	Q13069	117 aa		10.42	□□□□□ -0.74
COPS7B-222	ENST00000492423	GAGE13	Q4V321	117 aa		10.42	□□□□□ -0.74
COPS7B-222	ENST00000492423	RPL36AL	Q969Q0	106 aa	Known RBP	10.42	□□□□□ -0.74
COPS7B-222	ENST00000492423	PRADC1	Q9BSG0	188 aa		10.42	□□□□□ -0.74
COPS7B-222	ENST00000492423	NBEAL2	Q6ZNJ1	2754 aa		10.41	□□□□□ -0.74
COPS7B-222	ENST00000492423	VCY	O14598	125 aa		10.41	□□□□□ -0.74
COPS7B-222	ENST00000492423	HSBP1	O75506	76 aa		10.41	□□□□□ -0.74
COPS7B-222	ENST00000492423	TSHB	P01222	138 aa		10.41	□□□□□ -0.74
COPS7B-222	ENST00000492423	PMCHL1	Q16048	86 aa		10.41	□□□□□ -0.74
COPS7B-222	ENST00000492423	FAM19A2	Q8N3H0	131 aa		10.41	□□□□□ -0.74
COPS7B-222	ENST00000492423	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms