RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 UBE2G2P60604 165 aa7.35□□□□□ -1.23
CACNA1C-228ENST00000492150 GAGE6Q13070 117 aa7.35□□□□□ -1.23
CACNA1C-228ENST00000492150 ZNF726P1Q15940 193 aa7.35□□□□□ -1.23
CACNA1C-228ENST00000492150 PLAC8Q9NZF1 115 aa7.35□□□□□ -1.23
CACNA1C-228ENST00000492150 VAX2Q9UIW0 290 aa7.35□□□□□ -1.23
CACNA1C-228ENST00000492150 TNFSF18Q9UNG2 199 aa7.35□□□□□ -1.23
CACNA1C-228ENST00000492150 ZFP30Q9Y2G7 519 aa7.35□□□□□ -1.23
CACNA1C-228ENST00000492150 IGLV10-54A0A075B6I4 117 aa7.34□□□□□ -1.23
CACNA1C-228ENST00000492150 hDV102S1A0JD36 115 aa7.34□□□□□ -1.23
CACNA1C-228ENST00000492150 FAM74A7A6NL05 159 aa7.34□□□□□ -1.23
CACNA1C-228ENST00000492150 UPK1BO75841 260 aa7.34□□□□□ -1.23
CACNA1C-228ENST00000492150 ZNF56Q15929 161 aa7.34□□□□□ -1.23
CACNA1C-228ENST00000492150 HIST1H2BAQ96A08 127 aa7.34□□□□□ -1.23
CACNA1C-228ENST00000492150 TRBV6-1A0A0K0K1D8 114 aa7.33□□□□□ -1.24
CACNA1C-228ENST00000492150 TMEM97Q5BJF2 176 aa7.33□□□□□ -1.24
CACNA1C-228ENST00000492150 LINC00299Q6ZSB3 139 aa7.33□□□□□ -1.24
CACNA1C-228ENST00000492150 OR10AG1Q8NH19 301 aa7.33□□□□□ -1.24
CACNA1C-228ENST00000492150 S100ZQ8WXG8 99 aa7.33□□□□□ -1.24
CACNA1C-228ENST00000492150 KIF25-AS1Q9Y6Z4 181 aa7.33□□□□□ -1.24
CACNA1C-228ENST00000492150 LTAP01374 205 aa7.32□□□□□ -1.24
CACNA1C-228ENST00000492150 REG3AQ06141 175 aa7.32□□□□□ -1.24
CACNA1C-228ENST00000492150 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.32□□□□□ -1.24
CACNA1C-228ENST00000492150 FMC1Q96HJ9 113 aa7.32□□□□□ -1.24
CACNA1C-228ENST00000492150 DERL1Q9BUN8 251 aa7.32□□□□□ -1.24
CACNA1C-228ENST00000492150 NKX6-2Q9C056 277 aaPredicted RBP7.32□□□□□ -1.24
CACNA1C-228ENST00000492150 NDUFA13Q9P0J0 144 aa7.32□□□□□ -1.24
CACNA1C-228ENST00000492150 TRBV25-1A0A075B6N4 114 aa7.31□□□□□ -1.24
CACNA1C-228ENST00000492150 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.31□□□□□ -1.24
CACNA1C-228ENST00000492150 CTXND1A0A1B0GTU2 59 aa7.31□□□□□ -1.24
CACNA1C-228ENST00000492150 PRR3P79522 188 aaKnown RBP7.31□□□□□ -1.24
CACNA1C-228ENST00000492150 IQCJQ1A5X6 159 aa7.31□□□□□ -1.24
CACNA1C-228ENST00000492150 C20orf203Q8NBC4 194 aa7.31□□□□□ -1.24
CACNA1C-228ENST00000492150 C7orf33Q8WU49 177 aa7.31□□□□□ -1.24
CACNA1C-228ENST00000492150 AQP10Q96PS8 301 aa7.31□□□□□ -1.24
CACNA1C-228ENST00000492150 ZNF471Q9BX82 626 aaPredicted RBP7.31□□□□□ -1.24
CACNA1C-228ENST00000492150 GFRA4Q9GZZ7 299 aa7.31□□□□□ -1.24
CACNA1C-228ENST00000492150 AP5S1Q9NUS5 200 aa7.31□□□□□ -1.24
CACNA1C-228ENST00000492150 TRAV8-4A0A0B4J246 113 aa7.3□□□□□ -1.24
CACNA1C-228ENST00000492150 MUC21A0A0G2JKD1 596 aa7.3□□□□□ -1.24
CACNA1C-228ENST00000492150 MUC21A0A140T8X8 626 aa7.3□□□□□ -1.24
CACNA1C-228ENST00000492150 F5H697 171 aa7.3□□□□□ -1.24
CACNA1C-228ENST00000492150 SNAI2O43623 268 aa7.3□□□□□ -1.24
CACNA1C-228ENST00000492150 P01737 135 aa7.3□□□□□ -1.24
CACNA1C-228ENST00000492150 UBE2G1P62253 170 aa7.3□□□□□ -1.24
CACNA1C-228ENST00000492150 WDR73Q6P4I2 378 aa7.3□□□□□ -1.24
CACNA1C-228ENST00000492150 SSBP4Q9BWG4 385 aaPredicted RBP7.3□□□□□ -1.24
CACNA1C-228ENST00000492150 IGLV4-60A0A075B6I1 120 aa7.29□□□□□ -1.24
CACNA1C-228ENST00000492150 IGHV1-24A0A0C4DH33 117 aa7.29□□□□□ -1.24
CACNA1C-228ENST00000492150 CXCL1P09341 107 aa7.29□□□□□ -1.24
CACNA1C-228ENST00000492150 RAB5CP51148 216 aa7.29□□□□□ -1.24
CACNA1C-228ENST00000492150 COX6A2Q02221 97 aa7.29□□□□□ -1.24
CACNA1C-228ENST00000492150 GTSF1Q8WW33 167 aa7.29□□□□□ -1.24
CACNA1C-228ENST00000492150 A6NHS1 94 aa7.28□□□□□ -1.24
CACNA1C-228ENST00000492150 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.28□□□□□ -1.24
CACNA1C-228ENST00000492150 DEFA3P59666 94 aa7.28□□□□□ -1.24
CACNA1C-228ENST00000492150 RPL7L1Q6DKI1 246 aaKnown RBP7.28□□□□□ -1.24
CACNA1C-228ENST00000492150 C15orf56Q8N910 161 aa7.28□□□□□ -1.24
CACNA1C-228ENST00000492150 PRSS3P2Q8NHM4 247 aa7.28□□□□□ -1.24
CACNA1C-228ENST00000492150 A0A1B0GUV1 79 aa7.27□□□□□ -1.25
CACNA1C-228ENST00000492150 OR5AL1P0C617 328 aa7.27□□□□□ -1.25
CACNA1C-228ENST00000492150 GZMBP10144 247 aa7.27□□□□□ -1.25
CACNA1C-228ENST00000492150 FHITP49789 147 aa7.27□□□□□ -1.25
CACNA1C-228ENST00000492150 SSTP61278 116 aa7.27□□□□□ -1.25
CACNA1C-228ENST00000492150 MAJINQ3KP22 176 aa7.27□□□□□ -1.25
CACNA1C-228ENST00000492150 Q5BKY6 102 aa7.27□□□□□ -1.25
CACNA1C-228ENST00000492150 SPANXN1Q5VSR9 72 aa7.27□□□□□ -1.25
CACNA1C-228ENST00000492150 IGKV2-24A0A0C4DH68 120 aa7.26□□□□□ -1.25
CACNA1C-228ENST00000492150 M0QY20 66 aa7.26□□□□□ -1.25
CACNA1C-228ENST00000492150 NDUFS6O75380 124 aaKnown RBP7.26□□□□□ -1.25
CACNA1C-228ENST00000492150 AKR1C3P42330 323 aa7.26□□□□□ -1.25
CACNA1C-228ENST00000492150 RPS10P46783 165 aaKnown RBP7.26□□□□□ -1.25
CACNA1C-228ENST00000492150 INO80EQ8NBZ0 244 aaPredicted RBP7.26□□□□□ -1.25
CACNA1C-228ENST00000492150 LYPD6BQ8NI32 183 aa7.26□□□□□ -1.25
CACNA1C-228ENST00000492150 TCEAL7Q9BRU2 100 aa7.26□□□□□ -1.25
CACNA1C-228ENST00000492150 MAP1LC3B2A6NCE7 125 aa7.25□□□□□ -1.25
CACNA1C-228ENST00000492150 SRSF9Q13242 221 aaKnown RBP eCLIP7.25□□□□□ -1.25
CACNA1C-228ENST00000492150 CST9LP1Q5W188 147 aa7.25□□□□□ -1.25
CACNA1C-228ENST00000492150 REG3GQ6UW15 175 aa7.25□□□□□ -1.25
CACNA1C-228ENST00000492150 SPINK6Q6UWN8 80 aa7.25□□□□□ -1.25
CACNA1C-228ENST00000492150 STPG4Q8N801 248 aa7.25□□□□□ -1.25
CACNA1C-228ENST00000492150 TMEM243Q9BU79 118 aa7.25□□□□□ -1.25
CACNA1C-228ENST00000492150 MLST8Q9BVC4 326 aa7.25□□□□□ -1.25
CACNA1C-228ENST00000492150 MAP1LC3BQ9GZQ8 125 aa7.25□□□□□ -1.25
CACNA1C-228ENST00000492150 ALG5Q9Y673 324 aa7.25□□□□□ -1.25
CACNA1C-228ENST00000492150 BORCS7-ASMTA0A0B4J1R7 106 aa7.24□□□□□ -1.25
CACNA1C-228ENST00000492150 GAGE12HA6NDE8 117 aa7.24□□□□□ -1.25
CACNA1C-228ENST00000492150 SMIM17P0DL12 118 aa7.24□□□□□ -1.25
CACNA1C-228ENST00000492150 AKR1C8PQ5T2L2 129 aa7.24□□□□□ -1.25
CACNA1C-228ENST00000492150 AP1S3Q96PC3 154 aa7.24□□□□□ -1.25
CACNA1C-228ENST00000492150 A0A096LNI7 61 aa7.23□□□□□ -1.25
CACNA1C-228ENST00000492150 NKX2-5P52952 324 aaPredicted RBP7.23□□□□□ -1.25
CACNA1C-228ENST00000492150 HIGD2BQ4VC39 106 aa7.23□□□□□ -1.25
CACNA1C-228ENST00000492150 SUMO4Q6EEV6 95 aa7.23□□□□□ -1.25
CACNA1C-228ENST00000492150 CFAP161Q6P656 301 aa7.23□□□□□ -1.25
CACNA1C-228ENST00000492150 STOML3Q8TAV4 291 aa7.23□□□□□ -1.25
CACNA1C-228ENST00000492150 PAGE4O60829 102 aa7.22□□□□□ -1.25
CACNA1C-228ENST00000492150 S100A9P06702 114 aaKnown RBP7.22□□□□□ -1.25
CACNA1C-228ENST00000492150 MGPP08493 103 aa7.22□□□□□ -1.25
CACNA1C-228ENST00000492150 SULT1A2P50226 295 aa7.22□□□□□ -1.25
CACNA1C-228ENST00000492150 DEFA1P59665 94 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms